Protein–RNA interactions for Protein: Q29RF7

PDS5A, Sister chromatid cohesion protein PDS5 homolog A, humanhuman

Known RBP Predictions only

Length 1,337 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDS5AQ29RF7 STARD7-AS1-202ENST00000446816 1527 ntTSL 2 BASIC21.5■■□□□ 1.03
PDS5AQ29RF7 ZZZ3-201ENST00000370798 2468 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
PDS5AQ29RF7 WWOX-214ENST00000566780 2482 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
PDS5AQ29RF7 C16orf70-208ENST00000569600 1353 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
PDS5AQ29RF7 GAB3-203ENST00000424127 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC21.5■■□□□ 1.03
PDS5AQ29RF7 ZNF446-207ENST00000610298 1869 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
PDS5AQ29RF7 CYP4F8-210ENST00000612078 1889 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
PDS5AQ29RF7 AC090164.3-201ENST00000610780 2143 ntBASIC21.5■■□□□ 1.03
PDS5AQ29RF7 MEN1-201ENST00000312049 2761 ntAPPRIS ALT1 TSL 1 (best) BASIC21.5■■□□□ 1.03
PDS5AQ29RF7 BSG-201ENST00000333511 1974 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
PDS5AQ29RF7 SLC22A11-202ENST00000377581 1975 ntTSL 5 BASIC21.5■■□□□ 1.03
PDS5AQ29RF7 AC117500.2-201ENST00000508145 1561 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
PDS5AQ29RF7 ZFP69-202ENST00000372706 2871 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
PDS5AQ29RF7 ABHD14B-203ENST00000395008 1818 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
PDS5AQ29RF7 SBNO2-201ENST00000361757 4923 ntAPPRIS P4 TSL 1 (best) BASIC21.5■■□□□ 1.03
PDS5AQ29RF7 ARFIP2-203ENST00000423813 1430 ntTSL 2 BASIC21.5■■□□□ 1.03
PDS5AQ29RF7 MCL1-201ENST00000307940 1110 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
PDS5AQ29RF7 TSPAN4-214ENST00000525201 834 ntTSL 5 BASIC21.5■■□□□ 1.03
PDS5AQ29RF7 KLK12-203ENST00000525263 1077 ntAPPRIS ALT2 TSL 1 (best) BASIC21.5■■□□□ 1.03
PDS5AQ29RF7 AP006621.3-203ENST00000525941 610 ntTSL 2 BASIC21.5■■□□□ 1.03
PDS5AQ29RF7 COX5A-202ENST00000562233 441 ntTSL 3 BASIC21.5■■□□□ 1.03
PDS5AQ29RF7 AL512343.2-201ENST00000609423 490 ntTSL 2 BASIC21.5■■□□□ 1.03
PDS5AQ29RF7 AC132872.3-201ENST00000620937 629 ntTSL 5 BASIC21.5■■□□□ 1.03
PDS5AQ29RF7 DPF3-204ENST00000546183 1514 ntTSL 2 BASIC21.5■■□□□ 1.03
PDS5AQ29RF7 TCTEX1D1-201ENST00000282670 2001 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
PDS5AQ29RF7 KCNN4-209ENST00000615047 2029 ntTSL 5 BASIC21.5■■□□□ 1.03
PDS5AQ29RF7 PRRT2-216ENST00000637403 2033 ntTSL 5 BASIC21.5■■□□□ 1.03
PDS5AQ29RF7 RTEL1-204ENST00000370003 2273 ntTSL 2 BASIC21.5■■□□□ 1.03
PDS5AQ29RF7 KCNH2-202ENST00000330883 3267 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
PDS5AQ29RF7 FAM206A-201ENST00000322940 2134 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
PDS5AQ29RF7 SYT15-201ENST00000374321 1369 ntAPPRIS P4 TSL 2 BASIC21.5■■□□□ 1.03
PDS5AQ29RF7 MAFF-207ENST00000538999 2365 ntTSL 2 BASIC21.5■■□□□ 1.03
PDS5AQ29RF7 REEP4-201ENST00000306306 1710 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
PDS5AQ29RF7 AL353593.2-201ENST00000602529 1483 ntBASIC21.49■■□□□ 1.03
PDS5AQ29RF7 MADD-208ENST00000405573 1823 ntTSL 5 BASIC21.49■■□□□ 1.03
PDS5AQ29RF7 CTSD-212ENST00000637815 2003 ntAPPRIS ALT2 TSL 5 BASIC21.49■■□□□ 1.03
PDS5AQ29RF7 PROK2-202ENST00000353065 1549 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
PDS5AQ29RF7 SLC27A1-204ENST00000598424 2681 ntTSL 2 BASIC21.49■■□□□ 1.03
PDS5AQ29RF7 PRICKLE4-204ENST00000458694 1646 ntAPPRIS P2 TSL 5 BASIC21.49■■□□□ 1.03
PDS5AQ29RF7 TFF3-201ENST00000291525 407 ntAPPRIS ALT2 TSL 5 BASIC21.49■■□□□ 1.03
PDS5AQ29RF7 UBE2J2-204ENST00000400929 1057 ntTSL 3 BASIC21.49■■□□□ 1.03
PDS5AQ29RF7 COLEC11-207ENST00000404205 1062 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
PDS5AQ29RF7 MTHFSD-203ENST00000543303 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC21.49■■□□□ 1.03
PDS5AQ29RF7 AC004801.5-202ENST00000546804 530 ntTSL 4 BASIC21.49■■□□□ 1.03
PDS5AQ29RF7 AC008878.2-201ENST00000601870 942 ntAPPRIS P1 TSL 4 BASIC21.49■■□□□ 1.03
PDS5AQ29RF7 MUC1-224ENST00000611577 1023 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
PDS5AQ29RF7 MTHFSD-220ENST00000634347 1207 ntAPPRIS P3 TSL 1 (best) BASIC21.49■■□□□ 1.03
PDS5AQ29RF7 PCBP3-205ENST00000400310 2168 ntTSL 2 BASIC21.49■■□□□ 1.03
PDS5AQ29RF7 ADRA1A-201ENST00000276393 2281 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
PDS5AQ29RF7 SAMD11-210ENST00000616016 2391 ntTSL 5 BASIC21.48■■□□□ 1.03
PDS5AQ29RF7 SAMD11-215ENST00000618779 2368 ntAPPRIS ALT2 TSL 5 BASIC21.48■■□□□ 1.03
PDS5AQ29RF7 KIF22-201ENST00000160827 2113 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
PDS5AQ29RF7 PCBP4-210ENST00000471622 1784 ntTSL 5 BASIC21.48■■□□□ 1.03
PDS5AQ29RF7 HIBADH-201ENST00000265395 1990 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
PDS5AQ29RF7 ZNF623-203ENST00000526926 2612 ntAPPRIS ALT2 TSL 2 BASIC21.48■■□□□ 1.03
PDS5AQ29RF7 TMEM59L-201ENST00000262817 1613 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
PDS5AQ29RF7 BTNL9-202ENST00000376841 1626 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
PDS5AQ29RF7 SCARF2-203ENST00000623402 3248 ntAPPRIS P3 TSL 1 (best) BASIC21.48■■□□□ 1.03
PDS5AQ29RF7 PTH2-201ENST00000270631 459 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
PDS5AQ29RF7 KRTAP1-1-201ENST00000306271 903 ntAPPRIS P1 BASIC21.48■■□□□ 1.03
PDS5AQ29RF7 ATPIF1-201ENST00000335514 494 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
PDS5AQ29RF7 ZHX1-C8orf76-201ENST00000357082 1257 ntAPPRIS P2 TSL 2 BASIC21.48■■□□□ 1.03
PDS5AQ29RF7 DMKN-206ENST00000418261 1257 ntAPPRIS ALT2 TSL 1 (best) BASIC21.48■■□□□ 1.03
PDS5AQ29RF7 AP000688.4-201ENST00000436303 446 ntTSL 3 BASIC21.48■■□□□ 1.03
PDS5AQ29RF7 PNMT-203ENST00000581428 677 ntTSL 2 BASIC21.48■■□□□ 1.03
PDS5AQ29RF7 LINC01197-204ENST00000611265 956 ntTSL 5 BASIC21.48■■□□□ 1.03
PDS5AQ29RF7 SCN5A-214ENST00000612060 714 ntTSL 5 BASIC21.48■■□□□ 1.03
PDS5AQ29RF7 AC116407.2-201ENST00000613639 860 ntBASIC21.48■■□□□ 1.03
PDS5AQ29RF7 AC243591.1-201ENST00000452967 1364 ntBASIC21.48■■□□□ 1.03
PDS5AQ29RF7 RTN4-201ENST00000317610 2333 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
PDS5AQ29RF7 ZDHHC17-201ENST00000426126 5259 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
PDS5AQ29RF7 IFNL4-204ENST00000634967 1493 ntAPPRIS ALT2 TSL 1 (best) BASIC21.48■■□□□ 1.03
PDS5AQ29RF7 TMEM214-203ENST00000404032 2830 ntTSL 2 BASIC21.48■■□□□ 1.03
PDS5AQ29RF7 DLGAP4-206ENST00000475894 3110 ntAPPRIS ALT2 TSL 2 BASIC21.48■■□□□ 1.03
PDS5AQ29RF7 CMTM3-201ENST00000361909 2159 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
PDS5AQ29RF7 KCNQ2-218ENST00000629676 2399 ntTSL 5 BASIC21.47■■□□□ 1.03
PDS5AQ29RF7 CARNS1-205ENST00000531040 2968 ntTSL 5 BASIC21.47■■□□□ 1.03
PDS5AQ29RF7 IL9RP2-201ENST00000423948 1312 ntBASIC21.47■■□□□ 1.03
PDS5AQ29RF7 AC074389.1-201ENST00000382528 1423 ntTSL 2 BASIC21.47■■□□□ 1.03
PDS5AQ29RF7 AL445238.1-203ENST00000606050 1525 ntTSL 2 BASIC21.47■■□□□ 1.03
PDS5AQ29RF7 CCDC115-201ENST00000259229 1646 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
PDS5AQ29RF7 SRPX-202ENST00000432886 1725 ntTSL 2 BASIC21.47■■□□□ 1.03
PDS5AQ29RF7 ZNF397-204ENST00000585800 2046 ntTSL 5 BASIC21.47■■□□□ 1.03
PDS5AQ29RF7 KRT8-216ENST00000552551 2126 ntAPPRIS P1 TSL 2 BASIC21.47■■□□□ 1.03
PDS5AQ29RF7 MTDH-203ENST00000519934 2184 ntTSL 5 BASIC21.47■■□□□ 1.03
PDS5AQ29RF7 TMSB4Y-201ENST00000284856 1669 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
PDS5AQ29RF7 PEX16-201ENST00000241041 1479 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
PDS5AQ29RF7 ODF3B-202ENST00000401779 869 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
PDS5AQ29RF7 ODF3B-203ENST00000403326 643 ntTSL 3 BASIC21.47■■□□□ 1.03
PDS5AQ29RF7 AL590627.1-203ENST00000421194 1026 ntBASIC21.47■■□□□ 1.03
PDS5AQ29RF7 ODF3B-205ENST00000428989 762 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
PDS5AQ29RF7 PRSS21-202ENST00000450020 1106 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
PDS5AQ29RF7 AC079776.4-201ENST00000511039 504 ntBASIC21.47■■□□□ 1.03
PDS5AQ29RF7 CHMP4A-211ENST00000609024 735 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
PDS5AQ29RF7 PRKN-208ENST00000610470 531 ntTSL 2 BASIC21.47■■□□□ 1.03
PDS5AQ29RF7 AC120114.3-201ENST00000611923 658 ntBASIC21.47■■□□□ 1.03
PDS5AQ29RF7 PRKN-209ENST00000612485 225 ntTSL 5 BASIC21.47■■□□□ 1.03
PDS5AQ29RF7 HOXA11-AS1_5.1-201ENST00000620211 203 ntBASIC21.47■■□□□ 1.03
PDS5AQ29RF7 TMEM235-201ENST00000374946 2409 ntTSL 5 BASIC21.47■■□□□ 1.03
PDS5AQ29RF7 SPPL2C-201ENST00000329196 2238 ntAPPRIS P1 BASIC21.47■■□□□ 1.03
Retrieved 100 of 98,524 protein–RNA pairs in 62 ms