Protein–RNA interactions for Protein: Q08174

PCDH1, Protocadherin-1, humanhuman

Predictions only

Length 1,060 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH1Q08174 EIF2AK4-209ENST00000560648 687 ntTSL 3 BASIC17.38■□□□□ 0.37
PCDH1Q08174 LITAF-220ENST00000620789 692 ntTSL 5 BASIC17.38■□□□□ 0.37
PCDH1Q08174 DGUOK-208ENST00000629438 1029 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
PCDH1Q08174 EIF3J-201ENST00000261868 2569 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
PCDH1Q08174 PTPDC1-202ENST00000375360 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
PCDH1Q08174 PLEKHB1-203ENST00000398492 2275 ntAPPRIS ALT1 TSL 1 (best) BASIC17.38■□□□□ 0.37
PCDH1Q08174 KCNH2-203ENST00000430723 2648 ntTSL 5 BASIC17.38■□□□□ 0.37
PCDH1Q08174 SLC27A5-207ENST00000601355 1987 ntAPPRIS ALT2 TSL 2 BASIC17.38■□□□□ 0.37
PCDH1Q08174 SEMA6C-209ENST00000613223 1950 ntTSL 5 BASIC17.38■□□□□ 0.37
PCDH1Q08174 CARD10-202ENST00000403299 4113 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
PCDH1Q08174 DICER1-AS1-204ENST00000554631 1709 ntTSL 2 BASIC17.38■□□□□ 0.37
PCDH1Q08174 AZU1-202ENST00000592205 1713 ntTSL 2 BASIC17.38■□□□□ 0.37
PCDH1Q08174 LINC00602-201ENST00000629776 2065 ntBASIC17.38■□□□□ 0.37
PCDH1Q08174 TRIM13-206ENST00000457662 1489 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
PCDH1Q08174 TAP1-201ENST00000354258 2959 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
PCDH1Q08174 SGSM2-201ENST00000268989 4863 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
PCDH1Q08174 THEG-201ENST00000342640 1877 ntAPPRIS P4 TSL 1 (best) BASIC17.37■□□□□ 0.37
PCDH1Q08174 PROK2-202ENST00000353065 1549 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
PCDH1Q08174 SDC1-203ENST00000403076 1523 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
PCDH1Q08174 NPBWR1-201ENST00000331251 2687 ntAPPRIS P1 BASIC17.37■□□□□ 0.37
PCDH1Q08174 AL355987.4-201ENST00000415992 4244 ntTSL 2 BASIC17.37■□□□□ 0.37
PCDH1Q08174 RALGAPA1-219ENST00000637992 8512 ntTSL 5 BASIC17.37■□□□□ 0.37
PCDH1Q08174 ADORA2A-213ENST00000610595 2736 ntAPPRIS P1 TSL 2 BASIC17.37■□□□□ 0.37
PCDH1Q08174 CAMK2B-203ENST00000347193 1577 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
PCDH1Q08174 PML-211ENST00000564428 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
PCDH1Q08174 KLHL33-202ENST00000636854 2394 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
PCDH1Q08174 ISLR2-210ENST00000565540 2780 ntAPPRIS P1 TSL 4 BASIC17.37■□□□□ 0.37
PCDH1Q08174 NAA60-201ENST00000360862 2522 ntTSL 2 BASIC17.37■□□□□ 0.37
PCDH1Q08174 C19orf54-203ENST00000470681 2521 ntTSL 2 BASIC17.37■□□□□ 0.37
PCDH1Q08174 KLK14-201ENST00000156499 1060 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
PCDH1Q08174 TMEM190-201ENST00000291934 593 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
PCDH1Q08174 FGF8-202ENST00000344255 707 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
PCDH1Q08174 H2AFB2-201ENST00000354514 348 ntAPPRIS P1 BASIC17.37■□□□□ 0.37
PCDH1Q08174 MRPL24-202ENST00000368211 883 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
PCDH1Q08174 AC114763.1-202ENST00000414911 867 ntTSL 3 BASIC17.37■□□□□ 0.37
PCDH1Q08174 KRT18P48-201ENST00000434763 852 ntBASIC17.37■□□□□ 0.37
PCDH1Q08174 AC092159.3-201ENST00000439196 571 ntTSL 4 BASIC17.37■□□□□ 0.37
PCDH1Q08174 TTTY14-203ENST00000447937 920 ntTSL 3 BASIC17.37■□□□□ 0.37
PCDH1Q08174 LBX1-AS1-203ENST00000454527 740 ntTSL 5 BASIC17.37■□□□□ 0.37
PCDH1Q08174 PDCD6-206ENST00000507528 1088 ntAPPRIS ALT1 TSL 1 (best) BASIC17.37■□□□□ 0.37
PCDH1Q08174 AC012213.1-202ENST00000523422 449 ntTSL 3 BASIC17.37■□□□□ 0.37
PCDH1Q08174 FAM181A-203ENST00000556222 1162 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
PCDH1Q08174 LINGO1-AS2-201ENST00000557799 663 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
PCDH1Q08174 AC025259.3-201ENST00000564531 542 ntTSL 3 BASIC17.37■□□□□ 0.37
PCDH1Q08174 ULK4P3-205ENST00000568486 1158 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
PCDH1Q08174 MALAT1-215ENST00000619449 794 ntTSL 3 BASIC17.37■□□□□ 0.37
PCDH1Q08174 AC092902.2-222ENST00000626312 568 ntTSL 5 BASIC17.37■□□□□ 0.37
PCDH1Q08174 ZNF394-201ENST00000337673 2179 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
PCDH1Q08174 MUS81-215ENST00000533035 2180 ntTSL 5 BASIC17.37■□□□□ 0.37
PCDH1Q08174 NR4A1-203ENST00000394824 2639 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
PCDH1Q08174 SLC35F5-201ENST00000245680 4412 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
PCDH1Q08174 AC134043.2-201ENST00000624206 2238 ntBASIC17.37■□□□□ 0.37
PCDH1Q08174 RELA-226ENST00000612991 2266 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
PCDH1Q08174 AC105285.1-202ENST00000499322 1866 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
PCDH1Q08174 MACF1-233ENST00000602421 1423 ntTSL 2 BASIC17.37■□□□□ 0.37
PCDH1Q08174 CDK11B-207ENST00000626918 2457 ntTSL 5 BASIC17.37■□□□□ 0.37
PCDH1Q08174 CDK11B-208ENST00000629289 2490 ntTSL 5 BASIC17.37■□□□□ 0.37
PCDH1Q08174 CDK11B-209ENST00000629312 2496 ntTSL 5 BASIC17.37■□□□□ 0.37
PCDH1Q08174 OXSR1-201ENST00000311806 4553 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
PCDH1Q08174 ALDH5A1-202ENST00000357578 5248 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
PCDH1Q08174 AC027312.1-201ENST00000523591 1571 ntTSL 5 BASIC17.36■□□□□ 0.37
PCDH1Q08174 SIGIRR-201ENST00000332725 1639 ntAPPRIS P1 TSL 2 BASIC17.36■□□□□ 0.37
PCDH1Q08174 RUNX1-207ENST00000437180 5967 ntAPPRIS P3 TSL 5 BASIC17.36■□□□□ 0.37
PCDH1Q08174 TREX2-201ENST00000330912 2262 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
PCDH1Q08174 PSRC1-203ENST00000369907 1717 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
PCDH1Q08174 DDX51-202ENST00000397333 4718 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
PCDH1Q08174 C16orf45-201ENST00000300006 2404 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
PCDH1Q08174 ASPM-201ENST00000294732 6132 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
PCDH1Q08174 CXXC5-211ENST00000511048 1892 ntAPPRIS P1 TSL 2 BASIC17.36■□□□□ 0.37
PCDH1Q08174 FGF8-201ENST00000320185 799 ntAPPRIS P4 TSL 1 (best) BASIC17.36■□□□□ 0.37
PCDH1Q08174 PIEZO1-202ENST00000327397 1246 ntTSL 2 BASIC17.36■□□□□ 0.37
PCDH1Q08174 TBC1D7-205ENST00000379307 1084 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
PCDH1Q08174 AK4P3-201ENST00000418260 669 ntBASIC17.36■□□□□ 0.37
PCDH1Q08174 AC104076.2-201ENST00000448912 469 ntBASIC17.36■□□□□ 0.37
PCDH1Q08174 KRT18P38-201ENST00000449496 1282 ntBASIC17.36■□□□□ 0.37
PCDH1Q08174 AC092597.1-201ENST00000487352 616 ntBASIC17.36■□□□□ 0.37
PCDH1Q08174 AC063952.2-201ENST00000498792 1227 ntBASIC17.36■□□□□ 0.37
PCDH1Q08174 AZIN1-AS1-214ENST00000522850 473 ntTSL 3 BASIC17.36■□□□□ 0.37
PCDH1Q08174 ANKRD34C-AS1-201ENST00000557790 594 ntTSL 3 BASIC17.36■□□□□ 0.37
PCDH1Q08174 AC092118.1-202ENST00000568697 718 ntTSL 3 BASIC17.36■□□□□ 0.37
PCDH1Q08174 AC239803.1-201ENST00000594189 1278 ntTSL 5 BASIC17.36■□□□□ 0.37
PCDH1Q08174 ALAS2-203ENST00000396198 1936 ntTSL 5 BASIC17.36■□□□□ 0.37
PCDH1Q08174 FBXW11-202ENST00000296933 4539 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
PCDH1Q08174 TRIM36-202ENST00000379617 1322 ntTSL 2 BASIC17.36■□□□□ 0.37
PCDH1Q08174 SYDE2-202ENST00000341460 5512 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
PCDH1Q08174 ARPIN-202ENST00000460685 2145 ntTSL 2 BASIC17.36■□□□□ 0.37
PCDH1Q08174 RPL3-201ENST00000216146 1442 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
PCDH1Q08174 MCRS1-202ENST00000357123 1428 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
PCDH1Q08174 SMG5-201ENST00000361813 4559 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
PCDH1Q08174 AC067852.2-201ENST00000590513 2313 ntBASIC17.36■□□□□ 0.37
PCDH1Q08174 ARPC1B-201ENST00000252725 1551 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
PCDH1Q08174 FAM222A-202ENST00000538780 3294 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
PCDH1Q08174 DAP3-214ENST00000471642 1671 ntTSL 5 BASIC17.36■□□□□ 0.37
PCDH1Q08174 RPN2-201ENST00000237530 2515 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
PCDH1Q08174 URI1-202ENST00000392271 3444 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
PCDH1Q08174 AJUBA-202ENST00000361265 2569 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
PCDH1Q08174 MORN1-203ENST00000378531 1798 ntAPPRIS P3 TSL 2 BASIC17.35■□□□□ 0.37
PCDH1Q08174 WAC-202ENST00000347934 2839 ntTSL 5 BASIC17.35■□□□□ 0.37
PCDH1Q08174 PXK-206ENST00000463280 2825 ntTSL 2 BASIC17.35■□□□□ 0.37
PCDH1Q08174 MAEA-219ENST00000514708 1945 ntTSL 2 BASIC17.35■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 26.1 ms