Protein–RNA interactions for Protein: Q03591

CFHR1, Complement factor H-related protein 1, humanhuman

Predictions only

Length 330 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CFHR1Q03591 AC098818.2-201ENST00000564925 2320 ntBASIC17.13■□□□□ 0.33
CFHR1Q03591 ADAP1-205ENST00000449296 2093 ntTSL 2 BASIC17.13■□□□□ 0.33
CFHR1Q03591 C6orf48-204ENST00000375639 712 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CFHR1Q03591 CD9-202ENST00000382515 1229 ntTSL 5 BASIC17.13■□□□□ 0.33
CFHR1Q03591 MRPS12-203ENST00000407800 1220 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CFHR1Q03591 GPX1P2-201ENST00000429271 606 ntBASIC17.13■□□□□ 0.33
CFHR1Q03591 AP000355.1-201ENST00000432032 480 ntTSL 5 BASIC17.13■□□□□ 0.33
CFHR1Q03591 B4GALT1-AS1-202ENST00000442432 843 ntTSL 2 BASIC17.13■□□□□ 0.33
CFHR1Q03591 AC004967.1-201ENST00000453589 447 ntBASIC17.13■□□□□ 0.33
CFHR1Q03591 DUTP2-201ENST00000519164 463 ntBASIC17.13■□□□□ 0.33
CFHR1Q03591 DHDH-204ENST00000523250 634 ntTSL 5 BASIC17.13■□□□□ 0.33
CFHR1Q03591 AC012640.2-201ENST00000561606 901 ntBASIC17.13■□□□□ 0.33
CFHR1Q03591 NKAPP1-205ENST00000585790 367 ntBASIC17.13■□□□□ 0.33
CFHR1Q03591 AC025062.2-201ENST00000605477 670 ntBASIC17.13■□□□□ 0.33
CFHR1Q03591 PTTG1IP-203ENST00000397887 2413 ntTSL 4 BASIC17.13■□□□□ 0.33
CFHR1Q03591 TMEM216-201ENST00000334888 1306 ntAPPRIS ALT2 TSL 2 BASIC17.13■□□□□ 0.33
CFHR1Q03591 TADA3-202ENST00000343450 2554 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
CFHR1Q03591 MATN4-205ENST00000537548 1991 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
CFHR1Q03591 CEACAM16-202ENST00000587331 1692 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CFHR1Q03591 DYNLL1-209ENST00000550845 1376 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
CFHR1Q03591 C16orf70-208ENST00000569600 1353 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CFHR1Q03591 COX20-203ENST00000411948 2631 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CFHR1Q03591 LRCH3-207ENST00000441090 2034 ntTSL 2 BASIC17.13■□□□□ 0.33
CFHR1Q03591 TRPV3-209ENST00000576742 2766 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
CFHR1Q03591 LTBP3-217ENST00000530785 2461 ntTSL 2 BASIC17.12■□□□□ 0.33
CFHR1Q03591 TUBA4A-201ENST00000248437 2162 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CFHR1Q03591 REPS1-203ENST00000409812 2511 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
CFHR1Q03591 KRT24-201ENST00000264651 1881 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CFHR1Q03591 DNAAF4-202ENST00000348518 1897 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
CFHR1Q03591 PTBP1-220ENST00000627714 2201 ntTSL 5 BASIC17.12■□□□□ 0.33
CFHR1Q03591 DENND6A-201ENST00000311128 4655 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CFHR1Q03591 AC242426.3-201ENST00000440377 1571 ntTSL 2 BASIC17.12■□□□□ 0.33
CFHR1Q03591 MAN1B1-207ENST00000535144 2296 ntTSL 2 BASIC17.12■□□□□ 0.33
CFHR1Q03591 BRMS1L-201ENST00000216807 2657 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CFHR1Q03591 KIF25-203ENST00000443060 1613 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
CFHR1Q03591 AC010522.1-205ENST00000598031 606 ntAPPRIS P1 TSL 3 BASIC17.12■□□□□ 0.33
CFHR1Q03591 AC027601.4-201ENST00000611259 610 ntBASIC17.12■□□□□ 0.33
CFHR1Q03591 KCNQ2-218ENST00000629676 2399 ntTSL 5 BASIC17.12■□□□□ 0.33
CFHR1Q03591 A4GALT-201ENST00000249005 2020 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CFHR1Q03591 MSLN-207ENST00000566549 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
CFHR1Q03591 ACVRL1-202ENST00000419526 1356 ntTSL 2 BASIC17.12■□□□□ 0.33
CFHR1Q03591 DKK3-202ENST00000396505 2650 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CFHR1Q03591 RPS6KA1-203ENST00000374166 3131 ntTSL 5 BASIC17.12■□□□□ 0.33
CFHR1Q03591 FAM198A-202ENST00000430121 3121 ntAPPRIS P2 TSL 5 BASIC17.12■□□□□ 0.33
CFHR1Q03591 NPFFR2-201ENST00000308744 1922 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
CFHR1Q03591 EOMES-202ENST00000449599 2829 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
CFHR1Q03591 ACP6-201ENST00000392988 1555 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
CFHR1Q03591 PIP4K2C-202ENST00000422156 1558 ntTSL 2 BASIC17.11■□□□□ 0.33
CFHR1Q03591 ZNF397-204ENST00000585800 2046 ntTSL 5 BASIC17.11■□□□□ 0.33
CFHR1Q03591 ALKBH4-201ENST00000292566 2105 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CFHR1Q03591 STRADB-202ENST00000392249 2190 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
CFHR1Q03591 SENP6-201ENST00000327284 2700 ntTSL 2 BASIC17.11■□□□□ 0.33
CFHR1Q03591 NXPH2-201ENST00000272641 1052 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CFHR1Q03591 ZAR1L-201ENST00000345108 1103 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CFHR1Q03591 GSTO1-202ENST00000369713 972 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CFHR1Q03591 CSF3-203ENST00000394148 622 ntTSL 3 BASIC17.11■□□□□ 0.33
CFHR1Q03591 C21orf33-205ENST00000427803 1077 ntTSL 2 BASIC17.11■□□□□ 0.33
CFHR1Q03591 AC069287.3-201ENST00000527297 589 ntTSL 5 BASIC17.11■□□□□ 0.33
CFHR1Q03591 MVB12A-211ENST00000529939 1091 ntTSL 3 BASIC17.11■□□□□ 0.33
CFHR1Q03591 KIRREL3-AS1-201ENST00000548204 586 ntTSL 3 BASIC17.11■□□□□ 0.33
CFHR1Q03591 UBE2Q2P1-205ENST00000559871 534 ntTSL 5 BASIC17.11■□□□□ 0.33
CFHR1Q03591 AC133919.2-201ENST00000565965 589 ntTSL 4 BASIC17.11■□□□□ 0.33
CFHR1Q03591 PNMT-203ENST00000581428 677 ntTSL 2 BASIC17.11■□□□□ 0.33
CFHR1Q03591 AC005256.1-202ENST00000592934 415 ntTSL 2 BASIC17.11■□□□□ 0.33
CFHR1Q03591 MID1IP1-201ENST00000336949 2536 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CFHR1Q03591 PEX14-201ENST00000356607 1985 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CFHR1Q03591 AL096828.2-201ENST00000567259 1965 ntBASIC17.11■□□□□ 0.33
CFHR1Q03591 LINC01105-206ENST00000456327 1434 ntTSL 5 BASIC17.11■□□□□ 0.33
CFHR1Q03591 IFNL4-204ENST00000634967 1493 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
CFHR1Q03591 HTD2-201ENST00000461393 1508 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CFHR1Q03591 CYP2D7-208ENST00000614967 1504 ntTSL 5 BASIC17.11■□□□□ 0.33
CFHR1Q03591 SEMA3B-210ENST00000611067 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
CFHR1Q03591 EIF3B-202ENST00000397011 2966 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CFHR1Q03591 AC093503.3-201ENST00000624917 2352 ntBASIC17.1■□□□□ 0.33
CFHR1Q03591 DHRS2-201ENST00000250383 1705 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
CFHR1Q03591 DOC2A-208ENST00000564944 1782 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
CFHR1Q03591 STRA6-209ENST00000563965 2565 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
CFHR1Q03591 AC093677.2-201ENST00000600169 1863 ntBASIC17.1■□□□□ 0.33
CFHR1Q03591 MARK2-211ENST00000513765 2671 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
CFHR1Q03591 CHTF8-203ENST00000448552 2903 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CFHR1Q03591 SMOX-204ENST00000346595 982 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
CFHR1Q03591 TEX30-206ENST00000376032 1165 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CFHR1Q03591 RBCK1-206ENST00000400247 790 ntTSL 2 BASIC17.1■□□□□ 0.33
CFHR1Q03591 HFE-210ENST00000470149 1123 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
CFHR1Q03591 AL442663.3-201ENST00000554737 1000 ntTSL 3 BASIC17.1■□□□□ 0.33
CFHR1Q03591 AL049869.3-201ENST00000554918 558 ntTSL 3 BASIC17.1■□□□□ 0.33
CFHR1Q03591 PDLIM4-201ENST00000253754 2282 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CFHR1Q03591 ILDR1-203ENST00000393631 1456 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
CFHR1Q03591 RBFOX1-222ENST00000585867 1580 ntTSL 2 BASIC17.1■□□□□ 0.33
CFHR1Q03591 RGS20-203ENST00000344277 1667 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
CFHR1Q03591 PTGES-201ENST00000340607 1774 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CFHR1Q03591 MARK2-202ENST00000361128 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
CFHR1Q03591 NUDC-201ENST00000321265 1800 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CFHR1Q03591 KDM4B-202ENST00000381759 3058 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
CFHR1Q03591 ZNF664-207ENST00000539644 5108 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CFHR1Q03591 RPS2P28-201ENST00000314255 741 ntBASIC17.09■□□□□ 0.33
CFHR1Q03591 MRPL55-208ENST00000366734 990 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
CFHR1Q03591 MRPL55-217ENST00000366746 565 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CFHR1Q03591 SELENOM-201ENST00000400299 694 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
CFHR1Q03591 RAB17-203ENST00000409576 466 ntTSL 3 BASIC17.09■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 26.8 ms