Protein–RNA interactions for Protein: Q01581

HMGCS1, Hydroxymethylglutaryl-CoA synthase, cytoplasmic, humanhuman

Predictions only

Length 520 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1Q01581 ARL16-211ENST00000576135 694 ntTSL 3 BASIC17.37■□□□□ 0.37
HMGCS1Q01581 AC133561.5-201ENST00000635547 218 ntBASIC17.37■□□□□ 0.37
HMGCS1Q01581 FBXL20-205ENST00000583610 1739 ntAPPRIS P1 TSL 2 BASIC17.37■□□□□ 0.37
HMGCS1Q01581 ZNF211-211ENST00000541801 2629 ntAPPRIS ALT2 TSL 3 BASIC17.37■□□□□ 0.37
HMGCS1Q01581 KRT18P22-201ENST00000402024 1347 ntBASIC17.37■□□□□ 0.37
HMGCS1Q01581 TBX18-202ENST00000369663 6245 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
HMGCS1Q01581 WDSUB1-203ENST00000392796 1812 ntAPPRIS P1 TSL 2 BASIC17.37■□□□□ 0.37
HMGCS1Q01581 WNT9B-201ENST00000290015 1376 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
HMGCS1Q01581 UMOD-205ENST00000570689 2315 ntAPPRIS P3 TSL 5 BASIC17.37■□□□□ 0.37
HMGCS1Q01581 NR2F1-201ENST00000327111 3732 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
HMGCS1Q01581 PHF20L1-201ENST00000220847 3297 ntTSL 5 BASIC17.37■□□□□ 0.37
HMGCS1Q01581 FAM110A-202ENST00000304189 1856 ntAPPRIS P1 TSL 2 BASIC17.37■□□□□ 0.37
HMGCS1Q01581 PLCB2-202ENST00000456256 4242 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
HMGCS1Q01581 MIB2-219ENST00000505820 3305 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
HMGCS1Q01581 PEX14-201ENST00000356607 1985 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
HMGCS1Q01581 ZIC3-202ENST00000370606 1968 ntTSL 5 BASIC17.37■□□□□ 0.37
HMGCS1Q01581 C18orf8-208ENST00000590868 2002 ntTSL 2 BASIC17.37■□□□□ 0.37
HMGCS1Q01581 PRRT2-216ENST00000637403 2033 ntTSL 5 BASIC17.37■□□□□ 0.37
HMGCS1Q01581 DCHS2-201ENST00000339452 5064 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
HMGCS1Q01581 PRDX3-201ENST00000298510 1591 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
HMGCS1Q01581 WRB-201ENST00000333781 1616 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
HMGCS1Q01581 CAB39-202ENST00000409788 1626 ntAPPRIS P1 TSL 2 BASIC17.36■□□□□ 0.37
HMGCS1Q01581 RGS3-211ENST00000462403 2155 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
HMGCS1Q01581 RAB40C-203ENST00000535977 2717 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
HMGCS1Q01581 FAM72C-201ENST00000369175 1658 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
HMGCS1Q01581 FAM72B-207ENST00000619376 1659 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
HMGCS1Q01581 E2F2-201ENST00000361729 5191 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
HMGCS1Q01581 AZU1-202ENST00000592205 1713 ntTSL 2 BASIC17.36■□□□□ 0.37
HMGCS1Q01581 GOLGA6L10-207ENST00000610657 1705 ntAPPRIS P2 TSL 2 BASIC17.36■□□□□ 0.37
HMGCS1Q01581 NARF-204ENST00000390006 1766 ntTSL 2 BASIC17.36■□□□□ 0.37
HMGCS1Q01581 ZBTB16-201ENST00000335953 2523 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
HMGCS1Q01581 VKORC1-202ENST00000319788 1077 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
HMGCS1Q01581 HOXD12-201ENST00000404162 841 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
HMGCS1Q01581 AC003075.1-204ENST00000433005 540 ntTSL 2 BASIC17.36■□□□□ 0.37
HMGCS1Q01581 CBLN1-202ENST00000536749 718 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
HMGCS1Q01581 USF2-205ENST00000594064 1179 ntTSL 2 BASIC17.36■□□□□ 0.37
HMGCS1Q01581 C16orf74-206ENST00000602766 832 ntAPPRIS ALT2 TSL 3 BASIC17.36■□□□□ 0.37
HMGCS1Q01581 HCK-210ENST00000629881 1969 ntAPPRIS ALT2 TSL 2 BASIC17.36■□□□□ 0.37
HMGCS1Q01581 SCNN1D-201ENST00000325425 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
HMGCS1Q01581 PODN-203ENST00000395871 2744 ntTSL 5 BASIC17.36■□□□□ 0.37
HMGCS1Q01581 TBC1D10C-201ENST00000312390 1497 ntTSL 5 BASIC17.36■□□□□ 0.37
HMGCS1Q01581 CBX1-201ENST00000225603 2232 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
HMGCS1Q01581 PP12613-201ENST00000424958 2230 ntBASIC17.36■□□□□ 0.37
HMGCS1Q01581 FZR1-203ENST00000441788 5212 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
HMGCS1Q01581 CBS-201ENST00000352178 2583 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
HMGCS1Q01581 RGS3-202ENST00000342620 1714 ntTSL 5 BASIC17.35■□□□□ 0.37
HMGCS1Q01581 SCHIP1-205ENST00000482804 1799 ntTSL 5 BASIC17.35■□□□□ 0.37
HMGCS1Q01581 EIF4G3-214ENST00000634879 5325 ntTSL 5 BASIC17.35■□□□□ 0.37
HMGCS1Q01581 TSKS-201ENST00000246801 1883 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
HMGCS1Q01581 ARSE-201ENST00000381134 1853 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
HMGCS1Q01581 TCTN1-204ENST00000397659 1885 ntAPPRIS P4 TSL 1 (best) BASIC17.35■□□□□ 0.37
HMGCS1Q01581 SENP2-201ENST00000296257 5717 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
HMGCS1Q01581 POLR3D-201ENST00000306433 1931 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
HMGCS1Q01581 ARSA-204ENST00000395621 1918 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
HMGCS1Q01581 TMEM216-203ENST00000515837 1958 ntAPPRIS P2 TSL 2 BASIC17.35■□□□□ 0.37
HMGCS1Q01581 OBSL1-201ENST00000289656 2274 ntTSL 5 BASIC17.35■□□□□ 0.37
HMGCS1Q01581 FIGNL2-202ENST00000618634 4812 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
HMGCS1Q01581 HPF1-201ENST00000393381 1230 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
HMGCS1Q01581 MUC1-211ENST00000438413 927 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
HMGCS1Q01581 AC108025.1-201ENST00000453678 1058 ntTSL 5 BASIC17.35■□□□□ 0.37
HMGCS1Q01581 DUT-205ENST00000558813 769 ntTSL 2 BASIC17.35■□□□□ 0.37
HMGCS1Q01581 C16orf74-207ENST00000602914 761 ntAPPRIS ALT2 TSL 2 BASIC17.35■□□□□ 0.37
HMGCS1Q01581 AC145285.6-201ENST00000604632 637 ntBASIC17.35■□□□□ 0.37
HMGCS1Q01581 AC141257.4-201ENST00000634557 245 ntBASIC17.35■□□□□ 0.37
HMGCS1Q01581 AC136944.6-201ENST00000634818 245 ntBASIC17.35■□□□□ 0.37
HMGCS1Q01581 TCIRG1-201ENST00000265686 2677 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
HMGCS1Q01581 RIN1-201ENST00000311320 2693 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
HMGCS1Q01581 TRIM73-205ENST00000450434 1425 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
HMGCS1Q01581 LBHD1-210ENST00000532208 1508 ntAPPRIS P2 TSL 5 BASIC17.35■□□□□ 0.37
HMGCS1Q01581 KCNE3-201ENST00000310128 3143 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
HMGCS1Q01581 PDIA2-202ENST00000404312 1575 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
HMGCS1Q01581 VRK3-225ENST00000601912 1668 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
HMGCS1Q01581 PRKRIP1-208ENST00000496391 3430 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
HMGCS1Q01581 JKAMP-201ENST00000261247 1726 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
HMGCS1Q01581 OR6D1P-202ENST00000641007 5290 ntBASIC17.35■□□□□ 0.37
HMGCS1Q01581 MAGED2-213ENST00000627068 1811 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
HMGCS1Q01581 DAG1-222ENST00000545947 5829 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
HMGCS1Q01581 GOLGA7-204ENST00000520817 1984 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
HMGCS1Q01581 MIEF2-204ENST00000395706 2441 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
HMGCS1Q01581 DTX2-202ENST00000413936 2472 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
HMGCS1Q01581 AC011474.1-201ENST00000582581 2582 ntTSL 2 BASIC17.35■□□□□ 0.37
HMGCS1Q01581 ACTN3-203ENST00000513398 2939 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
HMGCS1Q01581 SYVN1-201ENST00000294256 3048 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
HMGCS1Q01581 OSBPL1A-204ENST00000399443 3317 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
HMGCS1Q01581 FBXO33-201ENST00000298097 3853 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
HMGCS1Q01581 AZU1-201ENST00000233997 908 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
HMGCS1Q01581 SDF4-201ENST00000263741 2079 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
HMGCS1Q01581 CDH24-201ENST00000267383 2873 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
HMGCS1Q01581 STAC3-201ENST00000332782 1656 ntAPPRIS P1 TSL 2 BASIC17.34■□□□□ 0.37
HMGCS1Q01581 TSPAN14-202ENST00000341863 1037 ntTSL 5 BASIC17.34■□□□□ 0.37
HMGCS1Q01581 ZNF517-201ENST00000359971 2335 ntAPPRIS P1 TSL 4 BASIC17.34■□□□□ 0.37
HMGCS1Q01581 ZNF618-203ENST00000374126 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
HMGCS1Q01581 SDCBP2-203ENST00000381808 1261 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
HMGCS1Q01581 WWOX-203ENST00000406884 1701 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
HMGCS1Q01581 SLC25A48-202ENST00000412661 1148 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
HMGCS1Q01581 ILK-203ENST00000420936 1692 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
HMGCS1Q01581 CD70-202ENST00000423145 881 ntTSL 2 BASIC17.34■□□□□ 0.37
HMGCS1Q01581 SLC25A48-204ENST00000433282 1111 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
HMGCS1Q01581 PVRIG2P-201ENST00000435460 978 ntBASIC17.34■□□□□ 0.37
HMGCS1Q01581 MTMR1-208ENST00000445323 4516 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 28.6 ms