Protein–RNA interactions for Protein: P61619

SEC61A1, Protein transport protein Sec61 subunit alpha isoform 1, humanhuman

Known RBP Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A1P61619 CCNA1-202ENST00000440264 1758 ntAPPRIS P1 TSL 2 BASIC15.8■□□□□ 0.12
SEC61A1P61619 TMEM74-201ENST00000297459 1741 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
SEC61A1P61619 SPECC1-203ENST00000395525 2536 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
SEC61A1P61619 TBC1D3P2-202ENST00000577902 1649 ntBASIC15.79■□□□□ 0.12
SEC61A1P61619 TPD52L1-213ENST00000534000 2356 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
SEC61A1P61619 UCHL5-202ENST00000367449 1507 ntAPPRIS ALT1 TSL 1 (best) BASIC15.79■□□□□ 0.12
SEC61A1P61619 CENPA-202ENST00000335756 1452 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
SEC61A1P61619 LGALS8-AS1-201ENST00000487567 1457 ntBASIC15.79■□□□□ 0.12
SEC61A1P61619 MAP4K2-202ENST00000377350 2931 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
SEC61A1P61619 ACD-203ENST00000602320 1408 ntAPPRIS ALT2 TSL 5 BASIC15.79■□□□□ 0.12
SEC61A1P61619 SLC35B2-207ENST00000619636 2063 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
SEC61A1P61619 C4orf50-202ENST00000531445 6860 ntAPPRIS P5 TSL 5 BASIC15.79■□□□□ 0.12
SEC61A1P61619 SMIM25-203ENST00000425497 2010 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
SEC61A1P61619 SCFD2-204ENST00000611795 1320 ntTSL 5 BASIC15.79■□□□□ 0.12
SEC61A1P61619 ISM1-201ENST00000262487 2593 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
SEC61A1P61619 CD70-201ENST00000245903 913 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
SEC61A1P61619 TMEM234-201ENST00000309777 1082 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
SEC61A1P61619 MRPL53-202ENST00000409710 386 ntTSL 2 BASIC15.79■□□□□ 0.12
SEC61A1P61619 AC012618.3-203ENST00000426044 917 ntTSL 2 BASIC15.79■□□□□ 0.12
SEC61A1P61619 AL109797.1-201ENST00000452501 835 ntTSL 2 BASIC15.79■□□□□ 0.12
SEC61A1P61619 DYNLL1-205ENST00000548342 662 ntAPPRIS P1 TSL 2 BASIC15.79■□□□□ 0.12
SEC61A1P61619 LINC00094-205ENST00000603928 5722 ntAPPRIS ALT2 TSL 2 BASIC15.79■□□□□ 0.12
SEC61A1P61619 GPC2-201ENST00000292377 2532 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
SEC61A1P61619 PACSIN2-205ENST00000407585 3080 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
SEC61A1P61619 ABCC5-204ENST00000392579 1848 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
SEC61A1P61619 AC004890.2-201ENST00000426347 2419 ntTSL 5 BASIC15.79■□□□□ 0.12
SEC61A1P61619 EVI5L-202ENST00000538904 2418 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
SEC61A1P61619 SRF-201ENST00000265354 4202 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
SEC61A1P61619 TMEM65-201ENST00000297632 9029 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
SEC61A1P61619 ACOXL-205ENST00000439055 2373 ntTSL 2 BASIC15.79■□□□□ 0.12
SEC61A1P61619 ZFP3-201ENST00000318833 5206 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
SEC61A1P61619 AZU1-202ENST00000592205 1713 ntTSL 2 BASIC15.79■□□□□ 0.12
SEC61A1P61619 ELN-202ENST00000320399 2274 ntAPPRIS ALT2 TSL 5 BASIC15.79■□□□□ 0.12
SEC61A1P61619 TSC22D3-203ENST00000372383 2266 ntTSL 2 BASIC15.79■□□□□ 0.12
SEC61A1P61619 SLC25A51-202ENST00000377716 1691 ntAPPRIS P1 TSL 3 BASIC15.79■□□□□ 0.12
SEC61A1P61619 LCORL-203ENST00000382226 5009 ntAPPRIS P2 TSL 5 BASIC15.79■□□□□ 0.12
SEC61A1P61619 POC1B-GALNT4-201ENST00000547474 2207 ntTSL 2 BASIC15.79■□□□□ 0.12
SEC61A1P61619 RUNX2-201ENST00000359524 5390 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
SEC61A1P61619 AEBP1-206ENST00000450684 2571 ntTSL 2 BASIC15.79■□□□□ 0.12
SEC61A1P61619 ZNF281-203ENST00000367353 3080 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
SEC61A1P61619 NOL4L-205ENST00000375678 2042 ntAPPRIS ALT2 TSL 2 BASIC15.78■□□□□ 0.12
SEC61A1P61619 ACAP1-201ENST00000158762 2512 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
SEC61A1P61619 ASB6-203ENST00000450050 4535 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
SEC61A1P61619 ZBTB47-202ENST00000505904 2456 ntTSL 5 BASIC15.78■□□□□ 0.12
SEC61A1P61619 GAS2L1P1-201ENST00000420145 1480 ntBASIC15.78■□□□□ 0.12
SEC61A1P61619 C1orf159-204ENST00000379339 2429 ntAPPRIS ALT2 TSL 2 BASIC15.78■□□□□ 0.12
SEC61A1P61619 ALAS2-203ENST00000396198 1936 ntTSL 5 BASIC15.78■□□□□ 0.12
SEC61A1P61619 CMTM3-214ENST00000567572 1934 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
SEC61A1P61619 ARFGAP1-201ENST00000353546 2776 ntAPPRIS P4 TSL 1 (best) BASIC15.78■□□□□ 0.12
SEC61A1P61619 CHMP4A-201ENST00000347519 1393 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
SEC61A1P61619 ZBTB7C-221ENST00000590800 4947 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
SEC61A1P61619 ELP5-214ENST00000574993 2209 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
SEC61A1P61619 S100A16-203ENST00000368705 956 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
SEC61A1P61619 LCN8-201ENST00000371688 867 ntAPPRIS P2 TSL 1 (best) BASIC15.78■□□□□ 0.12
SEC61A1P61619 AL451069.1-201ENST00000455414 634 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
SEC61A1P61619 CENPX-206ENST00000580435 710 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
SEC61A1P61619 AC215522.2-202ENST00000633163 1143 ntTSL 5 BASIC15.78■□□□□ 0.12
SEC61A1P61619 CORO1C-204ENST00000541050 2487 ntAPPRIS P1 TSL 2 BASIC15.78■□□□□ 0.12
SEC61A1P61619 RRP7BP-201ENST00000357802 2375 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
SEC61A1P61619 NID1-202ENST00000366595 5412 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
SEC61A1P61619 RNF103-201ENST00000237455 3477 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
SEC61A1P61619 POLR1D-220ENST00000637071 1943 ntTSL 5 BASIC15.78■□□□□ 0.12
SEC61A1P61619 C12orf42-205ENST00000548048 1532 ntAPPRIS ALT2 TSL 5 BASIC15.78■□□□□ 0.12
SEC61A1P61619 TREX2-201ENST00000330912 2262 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
SEC61A1P61619 COBL-201ENST00000265136 5291 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
SEC61A1P61619 TSC2-201ENST00000219476 6156 ntAPPRIS P3 TSL 5 BASIC15.77■□□□□ 0.12
SEC61A1P61619 INPP5B-201ENST00000373021 3934 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
SEC61A1P61619 STX5-202ENST00000377897 1785 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
SEC61A1P61619 CLDN9-201ENST00000445369 2050 ntAPPRIS P1 BASIC15.77■□□□□ 0.12
SEC61A1P61619 VPS51-201ENST00000279281 2714 ntAPPRIS P2 TSL 1 (best) BASIC15.77■□□□□ 0.12
SEC61A1P61619 ACBD4-215ENST00000592162 1684 ntTSL 5 BASIC15.77■□□□□ 0.12
SEC61A1P61619 OLIG2-201ENST00000333337 3262 ntAPPRIS P1 BASIC15.77■□□□□ 0.12
SEC61A1P61619 ABHD14B-202ENST00000361143 1636 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
SEC61A1P61619 TNIP1-211ENST00000521591 2274 ntAPPRIS P3 TSL 1 (best) BASIC15.77■□□□□ 0.12
SEC61A1P61619 AC011270.2-201ENST00000624293 2550 ntBASIC15.77■□□□□ 0.12
SEC61A1P61619 PAX3-201ENST00000258387 958 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
SEC61A1P61619 CD7-201ENST00000312648 1281 ntAPPRIS P2 TSL 1 (best) BASIC15.77■□□□□ 0.12
SEC61A1P61619 CD70-202ENST00000423145 881 ntTSL 2 BASIC15.77■□□□□ 0.12
SEC61A1P61619 RNF144A-AS1-204ENST00000437589 618 ntTSL 2 BASIC15.77■□□□□ 0.12
SEC61A1P61619 OOEP-AS1-201ENST00000445350 463 ntTSL 3 BASIC15.77■□□□□ 0.12
SEC61A1P61619 GXYLT1P6-201ENST00000456472 1187 ntBASIC15.77■□□□□ 0.12
SEC61A1P61619 ZNF706-204ENST00000518336 501 ntAPPRIS P1 TSL 4 BASIC15.77■□□□□ 0.12
SEC61A1P61619 AC002310.4-201ENST00000568114 377 ntAPPRIS P1 TSL 5 BASIC15.77■□□□□ 0.12
SEC61A1P61619 AL445228.2-201ENST00000605589 952 ntBASIC15.77■□□□□ 0.12
SEC61A1P61619 ZGPAT-202ENST00000355969 1871 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
SEC61A1P61619 GNE-204ENST00000539208 2190 ntTSL 2 BASIC15.77■□□□□ 0.11
SEC61A1P61619 AC135776.1-201ENST00000319817 2481 ntBASIC15.77■□□□□ 0.11
SEC61A1P61619 MSLNL-201ENST00000442466 2109 ntAPPRIS P1 TSL 5 BASIC15.77■□□□□ 0.11
SEC61A1P61619 DHCR7-201ENST00000355527 2666 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
SEC61A1P61619 SMCHD1-201ENST00000320876 8821 ntAPPRIS P1 TSL 5 BASIC15.77■□□□□ 0.11
SEC61A1P61619 TRIM45-203ENST00000369464 3495 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
SEC61A1P61619 AC079922.2-201ENST00000457336 2022 ntTSL 2 BASIC15.77■□□□□ 0.11
SEC61A1P61619 ELF2-204ENST00000394235 4012 ntAPPRIS P1 TSL 5 BASIC15.77■□□□□ 0.11
SEC61A1P61619 CCNC-207ENST00000518714 1426 ntTSL 5 BASIC15.77■□□□□ 0.11
SEC61A1P61619 NR2F1-205ENST00000615873 1427 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
SEC61A1P61619 ZBTB32-201ENST00000262630 1960 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
SEC61A1P61619 JKAMP-202ENST00000356057 2524 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
SEC61A1P61619 ADO-201ENST00000373783 3627 ntAPPRIS P1 BASIC15.76■□□□□ 0.11
SEC61A1P61619 ATXN2-201ENST00000377617 4702 ntAPPRIS P3 TSL 1 (best) BASIC15.76■□□□□ 0.11
SEC61A1P61619 FO681492.1-203ENST00000622861 1362 ntAPPRIS ALT2 TSL 5 BASIC15.76■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 34.4 ms