Protein–RNA interactions for Protein: P58511

SMIM11A, Small integral membrane protein 11A, humanhuman

Predictions only

Length 58 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM11AP58511 IMPA2-208ENST00000589238 923 ntTSL 3 BASIC16.61■□□□□ 0.25
SMIM11AP58511 REXO1L10P-201ENST00000615707 1290 ntBASIC16.61■□□□□ 0.25
SMIM11AP58511 REXO1L12P-201ENST00000622156 912 ntBASIC16.61■□□□□ 0.25
SMIM11AP58511 PHF20L1-201ENST00000220847 3297 ntTSL 5 BASIC16.61■□□□□ 0.25
SMIM11AP58511 FZD10-201ENST00000229030 3281 ntAPPRIS P1 BASIC16.61■□□□□ 0.25
SMIM11AP58511 SLC10A3-202ENST00000369649 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
SMIM11AP58511 BMP3-201ENST00000282701 5734 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
SMIM11AP58511 WDFY4-202ENST00000360890 2193 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
SMIM11AP58511 KCTD15-202ENST00000430256 2555 ntAPPRIS P1 TSL 2 BASIC16.61■□□□□ 0.25
SMIM11AP58511 MOGS-205ENST00000452063 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
SMIM11AP58511 MYBPH-201ENST00000255416 1805 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
SMIM11AP58511 FAM110A-202ENST00000304189 1856 ntAPPRIS P1 TSL 2 BASIC16.61■□□□□ 0.25
SMIM11AP58511 ATP1B1-201ENST00000367815 1883 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
SMIM11AP58511 PDE9A-206ENST00000380328 1875 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
SMIM11AP58511 RAB23-202ENST00000468148 4837 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
SMIM11AP58511 SLK-202ENST00000369755 7766 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
SMIM11AP58511 OGFOD2-205ENST00000454694 1488 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
SMIM11AP58511 CYP2W1-201ENST00000308919 2304 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
SMIM11AP58511 SLC39A1-211ENST00000621013 2322 ntAPPRIS P1 TSL 2 BASIC16.61■□□□□ 0.25
SMIM11AP58511 ADCK5-201ENST00000308860 1949 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
SMIM11AP58511 AGAP2-AS1-201ENST00000542466 1500 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
SMIM11AP58511 CDH24-201ENST00000267383 2873 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
SMIM11AP58511 KDM5C-202ENST00000375379 5245 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
SMIM11AP58511 PCDHA1-203ENST00000504120 5263 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
SMIM11AP58511 STX17-205ENST00000525640 2523 ntAPPRIS P1 TSL 2 BASIC16.6■□□□□ 0.25
SMIM11AP58511 HOXA-AS3-205ENST00000524304 2063 ntTSL 2 BASIC16.6■□□□□ 0.25
SMIM11AP58511 AC141586.5-201ENST00000624546 2050 ntBASIC16.6■□□□□ 0.25
SMIM11AP58511 TMEM183A-201ENST00000367242 3019 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
SMIM11AP58511 ASCC2-223ENST00000542393 2594 ntTSL 2 BASIC16.6■□□□□ 0.25
SMIM11AP58511 AC133963.1-201ENST00000504166 1679 ntBASIC16.6■□□□□ 0.25
SMIM11AP58511 AC108860.2-201ENST00000562760 2183 ntBASIC16.6■□□□□ 0.25
SMIM11AP58511 FAM83G-202ENST00000388995 5266 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
SMIM11AP58511 SEMA3B-202ENST00000418576 1765 ntTSL 2 BASIC16.6■□□□□ 0.25
SMIM11AP58511 ZIC4-212ENST00000484399 1774 ntAPPRIS P1 TSL 2 BASIC16.6■□□□□ 0.25
SMIM11AP58511 MRPL15-201ENST00000260102 1147 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
SMIM11AP58511 NDUFS6-201ENST00000274137 1082 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
SMIM11AP58511 MED4-202ENST00000378586 931 ntAPPRIS ALT2 TSL 2 BASIC16.6■□□□□ 0.25
SMIM11AP58511 RPS2P55-201ENST00000397318 883 ntBASIC16.6■□□□□ 0.25
SMIM11AP58511 ATP5S-204ENST00000426751 1171 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
SMIM11AP58511 AC012618.2-201ENST00000428058 849 ntBASIC16.6■□□□□ 0.25
SMIM11AP58511 AC107956.1-201ENST00000494359 873 ntBASIC16.6■□□□□ 0.25
SMIM11AP58511 ZNF706-206ENST00000519744 785 ntTSL 3 BASIC16.6■□□□□ 0.25
SMIM11AP58511 NEURL1B-202ENST00000520919 1089 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
SMIM11AP58511 CERNA3-201ENST00000521403 557 ntTSL 3 BASIC16.6■□□□□ 0.25
SMIM11AP58511 BX088651.1-201ENST00000540551 451 ntBASIC16.6■□□□□ 0.25
SMIM11AP58511 CBLN3-202ENST00000555436 718 ntTSL 3 BASIC16.6■□□□□ 0.25
SMIM11AP58511 TNFRSF12A-206ENST00000575124 1133 ntTSL 2 BASIC16.6■□□□□ 0.25
SMIM11AP58511 ANKRD36-207ENST00000639293 1168 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
SMIM11AP58511 TJP2-202ENST00000377245 4611 ntAPPRIS P4 TSL 1 (best) BASIC16.6■□□□□ 0.25
SMIM11AP58511 ANKRD23-202ENST00000331001 2455 ntTSL 2 BASIC16.6■□□□□ 0.25
SMIM11AP58511 SLC25A3-211ENST00000548847 1369 ntTSL 5 BASIC16.6■□□□□ 0.25
SMIM11AP58511 TPSB2-203ENST00000612142 1352 ntAPPRIS P5 TSL 1 (best) BASIC16.6■□□□□ 0.25
SMIM11AP58511 ARHGEF40-201ENST00000298694 5919 ntAPPRIS P1 TSL 2 BASIC16.6■□□□□ 0.25
SMIM11AP58511 SYT8-202ENST00000381968 1424 ntAPPRIS P2 TSL 5 BASIC16.6■□□□□ 0.25
SMIM11AP58511 RNH1-205ENST00000397615 2014 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
SMIM11AP58511 PILRB-208ENST00000452089 2099 ntAPPRIS P2 TSL 2 BASIC16.6■□□□□ 0.25
SMIM11AP58511 TCEA1-201ENST00000396401 2718 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
SMIM11AP58511 KIF16B-203ENST00000408042 4640 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
SMIM11AP58511 MIB1-201ENST00000261537 9576 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
SMIM11AP58511 MTDH-201ENST00000336273 6177 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
SMIM11AP58511 DDX1-207ENST00000617198 2257 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
SMIM11AP58511 AC055811.2-201ENST00000427497 1693 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
SMIM11AP58511 MTMR14-203ENST00000353332 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
SMIM11AP58511 CSNK2A2-201ENST00000262506 1701 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
SMIM11AP58511 ANTXR1-201ENST00000303714 5859 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
SMIM11AP58511 SH2D3C-213ENST00000629203 2478 ntTSL 2 BASIC16.59■□□□□ 0.25
SMIM11AP58511 YY1AP1-206ENST00000359205 2690 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
SMIM11AP58511 CKMT1A-202ENST00000413453 1911 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
SMIM11AP58511 TRPC1-201ENST00000273482 4324 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
SMIM11AP58511 LRRFIP2-209ENST00000440230 1989 ntTSL 5 BASIC16.59■□□□□ 0.25
SMIM11AP58511 DMPK-201ENST00000291270 2787 ntAPPRIS P3 TSL 5 BASIC16.59■□□□□ 0.25
SMIM11AP58511 LOXL3-205ENST00000409986 2005 ntTSL 2 BASIC16.59■□□□□ 0.25
SMIM11AP58511 PRRT2-216ENST00000637403 2033 ntTSL 5 BASIC16.59■□□□□ 0.25
SMIM11AP58511 PLCD3-212ENST00000619929 6107 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
SMIM11AP58511 CCDC7-203ENST00000362006 2133 ntAPPRIS P2 TSL 1 (best) BASIC16.59■□□□□ 0.25
SMIM11AP58511 CHPF-202ENST00000373891 1079 ntTSL 2 BASIC16.59■□□□□ 0.25
SMIM11AP58511 AC012618.3-203ENST00000426044 917 ntTSL 2 BASIC16.59■□□□□ 0.25
SMIM11AP58511 FAM131A-208ENST00000453072 1038 ntTSL 2 BASIC16.59■□□□□ 0.25
SMIM11AP58511 AC091564.5-201ENST00000526456 820 ntTSL 4 BASIC16.59■□□□□ 0.25
SMIM11AP58511 LINC02167-201ENST00000562769 594 ntTSL 3 BASIC16.59■□□□□ 0.25
SMIM11AP58511 METTL23-208ENST00000588822 1049 ntTSL 3 BASIC16.59■□□□□ 0.25
SMIM11AP58511 ATP5D-207ENST00000591660 637 ntAPPRIS P1 TSL 3 BASIC16.59■□□□□ 0.25
SMIM11AP58511 SYNGR4-204ENST00000601610 859 ntTSL 3 BASIC16.59■□□□□ 0.25
SMIM11AP58511 GOLGA2P10-205ENST00000618267 983 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
SMIM11AP58511 AL513523.10-201ENST00000623024 1186 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
SMIM11AP58511 UNC13A-205ENST00000551649 6052 ntAPPRIS ALT2 TSL 5 BASIC16.59■□□□□ 0.25
SMIM11AP58511 C6orf47-202ENST00000375911 2475 ntAPPRIS P1 BASIC16.59■□□□□ 0.25
SMIM11AP58511 TLE2-219ENST00000591529 2483 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
SMIM11AP58511 PPP3CA-201ENST00000323055 4519 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
SMIM11AP58511 SLC29A2-206ENST00000546034 2509 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
SMIM11AP58511 ISM1-201ENST00000262487 2593 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
SMIM11AP58511 JMJD4-201ENST00000366758 2595 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
SMIM11AP58511 FKBP10-201ENST00000321562 2662 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
SMIM11AP58511 KLHDC3-201ENST00000244670 1903 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
SMIM11AP58511 FAM50B-202ENST00000380274 1932 ntAPPRIS P1 BASIC16.58■□□□□ 0.25
SMIM11AP58511 SSX2IP-210ENST00000605755 1933 ntTSL 2 BASIC16.58■□□□□ 0.25
SMIM11AP58511 FAM234A-203ENST00000399932 3213 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
SMIM11AP58511 STX3-201ENST00000337979 3299 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
SMIM11AP58511 PHYKPL-201ENST00000308158 2038 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
SMIM11AP58511 ZNF264-202ENST00000536056 2078 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 32.1 ms