Protein–RNA interactions for Protein: P56704

WNT3A, Protein Wnt-3a, humanhuman

Predictions only

Length 352 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
WNT3AP56704 PCDHAC2-201ENST00000289269 5963 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
WNT3AP56704 ARPC1B-201ENST00000252725 1551 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
WNT3AP56704 NTMT1-203ENST00000372483 1315 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
WNT3AP56704 POLI-207ENST00000579434 2705 ntTSL 1 (best) BASIC18.21■□□□□ 0.5
WNT3AP56704 RBCK1-203ENST00000382181 2208 ntTSL 1 (best) BASIC18.21■□□□□ 0.5
WNT3AP56704 SPAG9-202ENST00000357122 4761 ntAPPRIS P2 TSL 1 (best) BASIC18.21■□□□□ 0.5
WNT3AP56704 TSLP-203ENST00000420978 2621 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
WNT3AP56704 SOWAHC-201ENST00000356454 4657 ntAPPRIS P1 BASIC18.2■□□□□ 0.5
WNT3AP56704 AC004832.3-202ENST00000439838 1470 ntAPPRIS P1 TSL 2 BASIC18.2■□□□□ 0.5
WNT3AP56704 AL353692.3-201ENST00000407031 1396 ntBASIC18.2■□□□□ 0.5
WNT3AP56704 TMC6-203ENST00000392467 2833 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
WNT3AP56704 CLDND1-204ENST00000394185 2159 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
WNT3AP56704 EMX1-202ENST00000394111 1528 ntTSL 3 BASIC18.2■□□□□ 0.5
WNT3AP56704 KLHDC3-201ENST00000244670 1903 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
WNT3AP56704 NR5A1-202ENST00000373588 3104 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
WNT3AP56704 C20orf196-201ENST00000303142 1154 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
WNT3AP56704 FAM187B-201ENST00000324675 1184 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
WNT3AP56704 SFTPD-201ENST00000372292 1281 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
WNT3AP56704 BECN2-201ENST00000419583 1296 ntAPPRIS P1 BASIC18.2■□□□□ 0.5
WNT3AP56704 TSPY12P-201ENST00000421279 868 ntBASIC18.2■□□□□ 0.5
WNT3AP56704 AC105935.2-201ENST00000435478 544 ntTSL 4 BASIC18.2■□□□□ 0.5
WNT3AP56704 AC004540.1-201ENST00000439120 891 ntTSL 2 BASIC18.2■□□□□ 0.5
WNT3AP56704 FNDC5-205ENST00000496770 837 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
WNT3AP56704 LCN10-205ENST00000497771 723 ntAPPRIS P2 TSL 1 (best) BASIC18.2■□□□□ 0.5
WNT3AP56704 PRKCB-209ENST00000498058 480 ntTSL 3 BASIC18.2■□□□□ 0.5
WNT3AP56704 AL390719.2-201ENST00000606993 987 ntBASIC18.2■□□□□ 0.5
WNT3AP56704 GXYLT1P4-201ENST00000613576 1192 ntBASIC18.2■□□□□ 0.5
WNT3AP56704 TRIM15-207ENST00000376694 2214 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
WNT3AP56704 INPP5J-205ENST00000404390 2215 ntAPPRIS P3 TSL 2 BASIC18.2■□□□□ 0.5
WNT3AP56704 STIM2-212ENST00000639640 2241 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.5
WNT3AP56704 GPANK1-202ENST00000375895 1800 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
WNT3AP56704 PPAN-P2RY11-201ENST00000393796 2385 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
WNT3AP56704 KIF25-AS1-201ENST00000414364 1420 ntTSL 2 BASIC18.2■□□□□ 0.5
WNT3AP56704 MACF1-233ENST00000602421 1423 ntTSL 2 BASIC18.2■□□□□ 0.5
WNT3AP56704 NOV-201ENST00000259526 2522 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
WNT3AP56704 IVNS1ABP-202ENST00000367498 4199 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
WNT3AP56704 FNBP1-202ENST00000420781 5410 ntAPPRIS ALT1 TSL 1 (best) BASIC18.2■□□□□ 0.5
WNT3AP56704 MAGEA6-201ENST00000329342 1740 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
WNT3AP56704 MAGEA3-201ENST00000370278 1724 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
WNT3AP56704 ERLIN1-203ENST00000421367 5792 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
WNT3AP56704 AL079301.1-201ENST00000424580 1633 ntTSL 2 BASIC18.2■□□□□ 0.5
WNT3AP56704 PGR-201ENST00000263463 2496 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
WNT3AP56704 BOD1L2-201ENST00000585477 3239 ntAPPRIS P1 BASIC18.19■□□□□ 0.5
WNT3AP56704 AC134043.2-201ENST00000624206 2238 ntBASIC18.19■□□□□ 0.5
WNT3AP56704 CLEC4G-201ENST00000328853 1360 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
WNT3AP56704 RNF144A-201ENST00000320892 5743 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
WNT3AP56704 PARD3-205ENST00000374773 3420 ntTSL 5 BASIC18.19■□□□□ 0.5
WNT3AP56704 RAB17-201ENST00000264601 1966 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
WNT3AP56704 HDAC10-202ENST00000349505 1950 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
WNT3AP56704 FAM222A-201ENST00000358906 2731 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
WNT3AP56704 PIGQ-203ENST00000321878 3006 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
WNT3AP56704 PRRC2A-201ENST00000376007 6861 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
WNT3AP56704 STXBP2-201ENST00000221283 1876 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
WNT3AP56704 B3GNT2-201ENST00000301998 2763 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
WNT3AP56704 AGTRAP-201ENST00000314340 1107 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
WNT3AP56704 TMEM222-201ENST00000374076 1599 ntAPPRIS P2 TSL 1 (best) BASIC18.19■□□□□ 0.5
WNT3AP56704 TNFRSF10C-202ENST00000397703 1242 ntTSL 2 BASIC18.19■□□□□ 0.5
WNT3AP56704 DAP-202ENST00000432074 1048 ntTSL 2 BASIC18.19■□□□□ 0.5
WNT3AP56704 PANX1-202ENST00000436171 2750 ntAPPRIS ALT1 TSL 1 (best) BASIC18.19■□□□□ 0.5
WNT3AP56704 LINC02199-203ENST00000510229 496 ntTSL 3 BASIC18.19■□□□□ 0.5
WNT3AP56704 MPP2-206ENST00000518766 1896 ntTSL 2 BASIC18.19■□□□□ 0.5
WNT3AP56704 COLCA2-205ENST00000614153 1264 ntTSL 3 BASIC18.19■□□□□ 0.5
WNT3AP56704 PYCR1-217ENST00000629768 1740 ntTSL 5 BASIC18.19■□□□□ 0.5
WNT3AP56704 FAM213B-205ENST00000444521 2827 ntAPPRIS ALT2 TSL 2 BASIC18.19■□□□□ 0.5
WNT3AP56704 MYZAP-201ENST00000267853 2361 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
WNT3AP56704 ACOXL-205ENST00000439055 2373 ntTSL 2 BASIC18.19■□□□□ 0.5
WNT3AP56704 BPHL-203ENST00000380379 1928 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
WNT3AP56704 CSK-202ENST00000439220 1900 ntAPPRIS P1 TSL 2 BASIC18.19■□□□□ 0.5
WNT3AP56704 FAM157B-201ENST00000446912 1795 ntTSL 2 BASIC18.19■□□□□ 0.5
WNT3AP56704 MAGEA3-203ENST00000598245 1762 ntAPPRIS P1 TSL 2 BASIC18.19■□□□□ 0.5
WNT3AP56704 MAGEA6-204ENST00000616035 1762 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
WNT3AP56704 Z83836.1-201ENST00000624605 1642 ntBASIC18.19■□□□□ 0.5
WNT3AP56704 ACSS2-201ENST00000253382 2925 ntTSL 2 BASIC18.19■□□□□ 0.5
WNT3AP56704 AC055811.2-201ENST00000427497 1693 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
WNT3AP56704 CDH22-203ENST00000537909 3902 ntAPPRIS P1 TSL 2 BASIC18.18■□□□□ 0.5
WNT3AP56704 RPRD1A-201ENST00000357384 1850 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
WNT3AP56704 WWC1-201ENST00000265293 7130 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
WNT3AP56704 AC005332.8-201ENST00000622750 2735 ntBASIC18.18■□□□□ 0.5
WNT3AP56704 DDX31-201ENST00000310532 2408 ntTSL 2 BASIC18.18■□□□□ 0.5
WNT3AP56704 PDZD3-202ENST00000355547 2252 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
WNT3AP56704 AC012317.2-201ENST00000623305 2251 ntBASIC18.18■□□□□ 0.5
WNT3AP56704 ALDH4A1-201ENST00000290597 2124 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
WNT3AP56704 UBL5-201ENST00000358666 513 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
WNT3AP56704 AL031133.1-201ENST00000406807 723 ntBASIC18.18■□□□□ 0.5
WNT3AP56704 AL645929.1-201ENST00000420084 975 ntBASIC18.18■□□□□ 0.5
WNT3AP56704 AC005091.1-201ENST00000441955 1190 ntTSL 3 BASIC18.18■□□□□ 0.5
WNT3AP56704 VEGFA-222ENST00000520948 1199 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
WNT3AP56704 AL442663.3-201ENST00000554737 1000 ntTSL 3 BASIC18.18■□□□□ 0.5
WNT3AP56704 AC009154.2-201ENST00000621177 724 ntBASIC18.18■□□□□ 0.5
WNT3AP56704 MAFF-201ENST00000338483 2490 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
WNT3AP56704 RAD51-203ENST00000423169 1611 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
WNT3AP56704 HS3ST2-201ENST00000261374 2314 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
WNT3AP56704 KIAA1522-204ENST00000401073 5438 ntAPPRIS P3 TSL 2 BASIC18.18■□□□□ 0.5
WNT3AP56704 MAPKAP1-205ENST00000373503 3045 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
WNT3AP56704 AVPR1A-201ENST00000299178 5963 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
WNT3AP56704 STARD4-203ENST00000502322 1467 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
WNT3AP56704 NKD2-202ENST00000296849 2155 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
WNT3AP56704 P2RY6-208ENST00000540124 2351 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
WNT3AP56704 SMOC1-201ENST00000361956 2040 ntAPPRIS ALT1 TSL 1 (best) BASIC18.18■□□□□ 0.5
WNT3AP56704 SULT1A1-204ENST00000395609 1871 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 23 ms