Protein–RNA interactions for Protein: P55287

CDH11, Cadherin-11, humanhuman

Predictions only

Length 796 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH11P55287 GLRX2-201ENST00000367439 701 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
CDH11P55287 SHBG-203ENST00000416273 1042 ntAPPRIS ALT2 TSL 3 BASIC16.52■□□□□ 0.24
CDH11P55287 NOL7-202ENST00000451315 1184 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
CDH11P55287 DUX4L26-201ENST00000489078 1255 ntBASIC16.52■□□□□ 0.24
CDH11P55287 AC012213.1-202ENST00000523422 449 ntTSL 3 BASIC16.52■□□□□ 0.24
CDH11P55287 NME3-204ENST00000563498 920 ntTSL 2 BASIC16.52■□□□□ 0.24
CDH11P55287 ATP6V0C-203ENST00000565223 668 ntTSL 3 BASIC16.52■□□□□ 0.24
CDH11P55287 ATP6V0C-204ENST00000568562 477 ntTSL 3 BASIC16.52■□□□□ 0.24
CDH11P55287 MNT-208ENST00000575394 606 ntTSL 4 BASIC16.52■□□□□ 0.24
CDH11P55287 SHBG-215ENST00000575903 1196 ntTSL 3 BASIC16.52■□□□□ 0.24
CDH11P55287 RNF165-206ENST00000590330 1049 ntTSL 2 BASIC16.52■□□□□ 0.24
CDH11P55287 CYB561D2-210ENST00000607121 1004 ntTSL 2 BASIC16.52■□□□□ 0.24
CDH11P55287 PLD3-206ENST00000409587 2180 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.24
CDH11P55287 FXYD6-204ENST00000526014 2171 ntAPPRIS P2 TSL 1 (best) BASIC16.52■□□□□ 0.24
CDH11P55287 CEP78-204ENST00000415759 2623 ntAPPRIS ALT2 TSL 5 BASIC16.52■□□□□ 0.23
CDH11P55287 TBC1D3I-202ENST00000618620 1900 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
CDH11P55287 CTSA-204ENST00000372484 2149 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
CDH11P55287 ZNF346-208ENST00000511834 2306 ntTSL 5 BASIC16.52■□□□□ 0.23
CDH11P55287 STX17-205ENST00000525640 2523 ntAPPRIS P1 TSL 2 BASIC16.52■□□□□ 0.23
CDH11P55287 KHDC1-202ENST00000370384 1430 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.23
CDH11P55287 LRCH2-201ENST00000317135 4929 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.23
CDH11P55287 OBSL1-201ENST00000289656 2274 ntTSL 5 BASIC16.52■□□□□ 0.23
CDH11P55287 SCARB1-208ENST00000544327 1812 ntTSL 5 BASIC16.52■□□□□ 0.23
CDH11P55287 TRAPPC11-201ENST00000334690 4552 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
CDH11P55287 PHGDH-209ENST00000641074 1780 ntBASIC16.51■□□□□ 0.23
CDH11P55287 PLEKHG4-205ENST00000450733 4480 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
CDH11P55287 RASL10B-201ENST00000603017 3205 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CDH11P55287 L1CAM-203ENST00000370055 4655 ntTSL 5 BASIC16.51■□□□□ 0.23
CDH11P55287 BMPER-201ENST00000297161 5031 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CDH11P55287 CTNNBL1-201ENST00000361383 1925 ntAPPRIS P2 TSL 1 (best) BASIC16.51■□□□□ 0.23
CDH11P55287 RPS6KB1-204ENST00000443572 1913 ntTSL 2 BASIC16.51■□□□□ 0.23
CDH11P55287 CMTM3-214ENST00000567572 1934 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CDH11P55287 DENND5B-201ENST00000354285 3132 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
CDH11P55287 PARVG-205ENST00000422871 3462 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
CDH11P55287 ANKRD23-202ENST00000331001 2455 ntTSL 2 BASIC16.51■□□□□ 0.23
CDH11P55287 FFAR2-201ENST00000246549 2051 ntAPPRIS P1 BASIC16.51■□□□□ 0.23
CDH11P55287 CXXC5-211ENST00000511048 1892 ntAPPRIS P1 TSL 2 BASIC16.51■□□□□ 0.23
CDH11P55287 CDK4-202ENST00000312990 1650 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
CDH11P55287 PIN1-201ENST00000247970 997 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CDH11P55287 AIF1L-203ENST00000372298 849 ntTSL 3 BASIC16.51■□□□□ 0.23
CDH11P55287 ICAM1-202ENST00000423829 1296 ntTSL 2 BASIC16.51■□□□□ 0.23
CDH11P55287 TSPY17P-201ENST00000450329 467 ntBASIC16.51■□□□□ 0.23
CDH11P55287 BNIP3L-206ENST00000523515 915 ntTSL 2 BASIC16.51■□□□□ 0.23
CDH11P55287 NT5C-211ENST00000582170 653 ntTSL 3 BASIC16.51■□□□□ 0.23
CDH11P55287 AC010653.2-201ENST00000623505 997 ntBASIC16.51■□□□□ 0.23
CDH11P55287 ASRGL1-211ENST00000628829 1161 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
CDH11P55287 SCPEP1-216ENST00000631024 444 ntTSL 5 BASIC16.51■□□□□ 0.23
CDH11P55287 CCNYL1-201ENST00000295414 3767 ntTSL 5 BASIC16.51■□□□□ 0.23
CDH11P55287 ACSM2B-208ENST00000565322 1834 ntTSL 2 BASIC16.51■□□□□ 0.23
CDH11P55287 TNFRSF19-202ENST00000382258 1625 ntAPPRIS P4 TSL 1 (best) BASIC16.51■□□□□ 0.23
CDH11P55287 CCDC88C-203ENST00000389856 1641 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
CDH11P55287 FAM118A-202ENST00000405673 1612 ntTSL 5 BASIC16.51■□□□□ 0.23
CDH11P55287 EPHX4-201ENST00000370383 1437 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CDH11P55287 TRIM73-205ENST00000450434 1425 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
CDH11P55287 LRRC20-203ENST00000358141 2924 ntTSL 2 BASIC16.51■□□□□ 0.23
CDH11P55287 FAM69C-201ENST00000343998 3671 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
CDH11P55287 HDAC10-202ENST00000349505 1950 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
CDH11P55287 PHF20L1-201ENST00000220847 3297 ntTSL 5 BASIC16.51■□□□□ 0.23
CDH11P55287 PDIA5-201ENST00000316218 1799 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CDH11P55287 LRRC58-201ENST00000295628 7903 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CDH11P55287 MCF2L-203ENST00000375604 6445 ntAPPRIS P3 TSL 2 BASIC16.5■□□□□ 0.23
CDH11P55287 MYH14-202ENST00000376970 6787 ntAPPRIS ALT2 TSL 5 BASIC16.5■□□□□ 0.23
CDH11P55287 HCN1-201ENST00000303230 9885 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CDH11P55287 ENDOV-225ENST00000522751 1475 ntTSL 5 BASIC16.5■□□□□ 0.23
CDH11P55287 SLCO6A1-202ENST00000389019 2340 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
CDH11P55287 PLA2G4C-222ENST00000599921 1984 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
CDH11P55287 TPPP3-201ENST00000290942 1116 ntAPPRIS P1 TSL 2 BASIC16.5■□□□□ 0.23
CDH11P55287 TPPP3-202ENST00000393957 1058 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CDH11P55287 AC007663.1-201ENST00000438948 1240 ntBASIC16.5■□□□□ 0.23
CDH11P55287 ELOVL2-AS1-202ENST00000456616 903 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
CDH11P55287 AC002467.1-201ENST00000457510 657 ntTSL 3 BASIC16.5■□□□□ 0.23
CDH11P55287 ETS1-207ENST00000531611 2134 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
CDH11P55287 AL929554.1-201ENST00000568665 460 ntAPPRIS P1 TSL 3 BASIC16.5■□□□□ 0.23
CDH11P55287 TXNL4A-211ENST00000592837 611 ntTSL 2 BASIC16.5■□□□□ 0.23
CDH11P55287 FP565260.3-205ENST00000620481 816 ntTSL 5 BASIC16.5■□□□□ 0.23
CDH11P55287 AC006011.2-201ENST00000621313 1158 ntBASIC16.5■□□□□ 0.23
CDH11P55287 ISOC2-201ENST00000085068 1122 ntTSL 2 BASIC16.5■□□□□ 0.23
CDH11P55287 PPHLN1-213ENST00000549190 1777 ntTSL 5 BASIC16.5■□□□□ 0.23
CDH11P55287 CSRNP1-201ENST00000273153 3148 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CDH11P55287 RHOBTB1-201ENST00000337910 4473 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CDH11P55287 ADGRG2-202ENST00000354791 4494 ntTSL 5 BASIC16.5■□□□□ 0.23
CDH11P55287 RSBN1-205ENST00000615321 2418 ntTSL 2 BASIC16.5■□□□□ 0.23
CDH11P55287 NOMO2-211ENST00000621364 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
CDH11P55287 ANXA6-201ENST00000354546 2593 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CDH11P55287 MRM2-203ENST00000440306 1570 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
CDH11P55287 CPT2-208ENST00000636891 2746 ntTSL 5 BASIC16.5■□□□□ 0.23
CDH11P55287 NEURL1B-201ENST00000369800 6424 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CDH11P55287 C18orf8-208ENST00000590868 2002 ntTSL 2 BASIC16.5■□□□□ 0.23
CDH11P55287 CHRNA5-201ENST00000299565 3623 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CDH11P55287 ADO-201ENST00000373783 3627 ntAPPRIS P1 BASIC16.5■□□□□ 0.23
CDH11P55287 CCK-202ENST00000396169 1527 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CDH11P55287 TJP1-212ENST00000614355 6977 ntAPPRIS ALT2 TSL 5 BASIC16.5■□□□□ 0.23
CDH11P55287 RNPS1-205ENST00000561718 1806 ntTSL 3 BASIC16.49■□□□□ 0.23
CDH11P55287 NFATC1-206ENST00000542384 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
CDH11P55287 FKBP3-202ENST00000396062 1346 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
CDH11P55287 OARD1-202ENST00000424266 1337 ntAPPRIS P1 TSL 2 BASIC16.49■□□□□ 0.23
CDH11P55287 HAUS4-217ENST00000555367 1454 ntTSL 5 BASIC16.49■□□□□ 0.23
CDH11P55287 KCNQ2-207ENST00000370224 3004 ntTSL 5 BASIC16.49■□□□□ 0.23
CDH11P55287 LPAR2-201ENST00000407877 1791 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
CDH11P55287 AL645608.8-201ENST00000606034 2086 ntBASIC16.49■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 295.4 ms