Protein–RNA interactions for Protein: P54252

ATXN3, Ataxin-3, humanhuman

Predicted RBP Predictions only

Length 364 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3P54252 ALDH5A1-201ENST00000348925 2266 ntAPPRIS P4 TSL 1 (best) BASIC18.4■□□□□ 0.54
ATXN3P54252 PCCB-216ENST00000483687 1727 ntTSL 3 BASIC18.4■□□□□ 0.54
ATXN3P54252 B4GALT2-202ENST00000356836 2629 ntAPPRIS P1 TSL 2 BASIC18.4■□□□□ 0.54
ATXN3P54252 FIGNL2-201ENST00000564840 4693 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
ATXN3P54252 DMRTA1-201ENST00000325870 5569 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
ATXN3P54252 RALGAPA1-219ENST00000637992 8512 ntTSL 5 BASIC18.4■□□□□ 0.54
ATXN3P54252 MRPL3-202ENST00000425847 1457 ntTSL 2 BASIC18.4■□□□□ 0.54
ATXN3P54252 AL031598.1-201ENST00000561511 1773 ntBASIC18.4■□□□□ 0.54
ATXN3P54252 RUBCNL-203ENST00000378787 2731 ntTSL 2 BASIC18.4■□□□□ 0.54
ATXN3P54252 KRBOX1-AS1-201ENST00000447834 2134 ntTSL 2 BASIC18.4■□□□□ 0.54
ATXN3P54252 FER1L4-211ENST00000616283 1818 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
ATXN3P54252 STARD10-218ENST00000543304 1513 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
ATXN3P54252 GAS7-210ENST00000579158 1528 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
ATXN3P54252 PHKA2-201ENST00000379942 5559 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
ATXN3P54252 SCOC-208ENST00000510586 2193 ntAPPRIS ALT1 TSL 5 BASIC18.4■□□□□ 0.54
ATXN3P54252 AC016757.1-205ENST00000470346 1888 ntTSL 2 BASIC18.4■□□□□ 0.54
ATXN3P54252 JAG1-201ENST00000254958 6048 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
ATXN3P54252 DFFB-203ENST00000341385 572 ntTSL 5 BASIC18.4■□□□□ 0.54
ATXN3P54252 CELA2A-201ENST00000359621 919 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
ATXN3P54252 ART5-201ENST00000359918 1241 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
ATXN3P54252 SERF1B-202ENST00000380751 703 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
ATXN3P54252 SEC61G-203ENST00000415949 732 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
ATXN3P54252 NOP16-205ENST00000509257 1000 ntTSL 2 BASIC18.4■□□□□ 0.54
ATXN3P54252 AP003555.3-201ENST00000534086 432 ntTSL 4 BASIC18.4■□□□□ 0.54
ATXN3P54252 RAD52-211ENST00000536177 1139 ntAPPRIS ALT2 TSL 2 BASIC18.4■□□□□ 0.54
ATXN3P54252 ORAOV1-210ENST00000539414 817 ntAPPRIS ALT1 TSL 2 BASIC18.4■□□□□ 0.54
ATXN3P54252 ADAM10-217ENST00000561288 583 ntTSL 3 BASIC18.4■□□□□ 0.54
ATXN3P54252 AC015961.2-201ENST00000589281 701 ntTSL 3 BASIC18.4■□□□□ 0.54
ATXN3P54252 ASF1B-205ENST00000592798 769 ntTSL 2 BASIC18.4■□□□□ 0.54
ATXN3P54252 CALM3-211ENST00000598871 561 ntTSL 4 BASIC18.4■□□□□ 0.54
ATXN3P54252 Z69720.1-201ENST00000601483 472 ntBASIC18.4■□□□□ 0.54
ATXN3P54252 USP39-202ENST00000409025 1946 ntTSL 5 BASIC18.4■□□□□ 0.54
ATXN3P54252 PLA2R1-202ENST00000392771 5160 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
ATXN3P54252 AP000997.3-201ENST00000623333 2250 ntBASIC18.4■□□□□ 0.54
ATXN3P54252 ANKS3-230ENST00000614075 2387 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
ATXN3P54252 IFNL4-203ENST00000634680 1421 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
ATXN3P54252 CLDN5-202ENST00000406028 2548 ntTSL 2 BASIC18.4■□□□□ 0.54
ATXN3P54252 STX2-201ENST00000261653 3331 ntAPPRIS ALT1 TSL 1 (best) BASIC18.39■□□□□ 0.54
ATXN3P54252 CD177-203ENST00000618265 2222 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
ATXN3P54252 B3GALT5-206ENST00000615480 2617 ntAPPRIS P1 TSL 2 BASIC18.39■□□□□ 0.54
ATXN3P54252 AGFG1-201ENST00000310078 8668 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.54
ATXN3P54252 CDX4-201ENST00000373514 1515 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
ATXN3P54252 PRKCB-202ENST00000321728 2689 ntAPPRIS ALT1 TSL 1 (best) BASIC18.39■□□□□ 0.54
ATXN3P54252 CHRNA10-201ENST00000250699 1945 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
ATXN3P54252 AC011944.1-201ENST00000316148 1900 ntTSL 2 BASIC18.39■□□□□ 0.53
ATXN3P54252 RABEP2-202ENST00000358201 2821 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
ATXN3P54252 APMAP-201ENST00000217456 2430 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
ATXN3P54252 PRDM8-203ENST00000504452 3706 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.53
ATXN3P54252 MRPL43-203ENST00000318364 1010 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
ATXN3P54252 MRPL43-204ENST00000342071 894 ntTSL 5 BASIC18.39■□□□□ 0.53
ATXN3P54252 SPNS3-201ENST00000355530 2133 ntAPPRIS P1 TSL 2 BASIC18.39■□□□□ 0.53
ATXN3P54252 NFIB-201ENST00000380921 1274 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
ATXN3P54252 AC093459.1-201ENST00000444567 481 ntTSL 3 BASIC18.39■□□□□ 0.53
ATXN3P54252 PCAT7-201ENST00000452148 1164 ntTSL 2 BASIC18.39■□□□□ 0.53
ATXN3P54252 PENK-208ENST00000523051 772 ntTSL 5 BASIC18.39■□□□□ 0.53
ATXN3P54252 BMF-207ENST00000559701 630 ntTSL 3 BASIC18.39■□□□□ 0.53
ATXN3P54252 RNF126P1-202ENST00000569893 925 ntBASIC18.39■□□□□ 0.53
ATXN3P54252 AL121912.1-201ENST00000603683 238 ntBASIC18.39■□□□□ 0.53
ATXN3P54252 H2BFWT-202ENST00000611083 528 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
ATXN3P54252 VPS37D-202ENST00000451519 1303 ntTSL 5 BASIC18.39■□□□□ 0.53
ATXN3P54252 UBC-206ENST00000538617 1303 ntTSL 5 BASIC18.39■□□□□ 0.53
ATXN3P54252 KREMEN2-206ENST00000575885 1798 ntTSL 2 BASIC18.39■□□□□ 0.53
ATXN3P54252 PRR5-201ENST00000006251 1767 ntTSL 2 BASIC18.39■□□□□ 0.53
ATXN3P54252 TCEA1-201ENST00000396401 2718 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
ATXN3P54252 CCDC74B-202ENST00000392984 1353 ntAPPRIS ALT2 TSL 5 BASIC18.39■□□□□ 0.53
ATXN3P54252 TSPAN17-201ENST00000298564 2810 ntTSL 2 BASIC18.39■□□□□ 0.53
ATXN3P54252 CABP4-202ENST00000438189 1426 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
ATXN3P54252 SIL1-202ENST00000394817 1923 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
ATXN3P54252 ADCY8-201ENST00000286355 5938 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
ATXN3P54252 TSR2-201ENST00000375151 1534 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
ATXN3P54252 ADO-201ENST00000373783 3627 ntAPPRIS P1 BASIC18.38■□□□□ 0.53
ATXN3P54252 ADAMTS16-203ENST00000511368 2682 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
ATXN3P54252 RBPMS-210ENST00000520191 1613 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
ATXN3P54252 DNAJA3-203ENST00000431375 2294 ntTSL 2 BASIC18.38■□□□□ 0.53
ATXN3P54252 TFCP2-205ENST00000549867 1727 ntTSL 5 BASIC18.38■□□□□ 0.53
ATXN3P54252 CD276-203ENST00000537340 2439 ntTSL 2 BASIC18.38■□□□□ 0.53
ATXN3P54252 PLA2G7-201ENST00000274793 1882 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
ATXN3P54252 GPT-202ENST00000394955 1885 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
ATXN3P54252 AL354751.1-201ENST00000412768 1863 ntBASIC18.38■□□□□ 0.53
ATXN3P54252 HDDC3-201ENST00000330334 1047 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
ATXN3P54252 TBPL1-203ENST00000367871 808 ntTSL 2 BASIC18.38■□□□□ 0.53
ATXN3P54252 AC073111.4-202ENST00000486297 585 ntTSL 4 BASIC18.38■□□□□ 0.53
ATXN3P54252 AP003733.1-201ENST00000491725 852 ntBASIC18.38■□□□□ 0.53
ATXN3P54252 AC099336.1-202ENST00000602961 463 ntBASIC18.38■□□□□ 0.53
ATXN3P54252 AC120114.3-201ENST00000611923 658 ntBASIC18.38■□□□□ 0.53
ATXN3P54252 LITAF-220ENST00000620789 692 ntTSL 5 BASIC18.38■□□□□ 0.53
ATXN3P54252 CD248-201ENST00000311330 2558 ntAPPRIS P1 BASIC18.38■□□□□ 0.53
ATXN3P54252 BICD1-207ENST00000551848 1962 ntBASIC18.38■□□□□ 0.53
ATXN3P54252 ENC1-201ENST00000302351 5520 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
ATXN3P54252 VWA8-AS1-201ENST00000611103 2079 ntTSL 2 BASIC18.38■□□□□ 0.53
ATXN3P54252 DIAPH2-205ENST00000373061 4983 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
ATXN3P54252 HYOU1-212ENST00000532519 2162 ntTSL 5 BASIC18.38■□□□□ 0.53
ATXN3P54252 NOC2LP1-202ENST00000452600 2235 ntBASIC18.38■□□□□ 0.53
ATXN3P54252 GSEC-201ENST00000626810 2289 ntTSL 2 BASIC18.38■□□□□ 0.53
ATXN3P54252 TNFRSF1A-213ENST00000540022 1527 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
ATXN3P54252 AC067852.2-201ENST00000590513 2313 ntBASIC18.38■□□□□ 0.53
ATXN3P54252 EGFL6-202ENST00000380602 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
ATXN3P54252 ATRIP-202ENST00000346691 2509 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
ATXN3P54252 TRIM63-201ENST00000374272 1770 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
ATXN3P54252 TCP11-204ENST00000373979 1882 ntAPPRIS P3 TSL 5 BASIC18.37■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 24.2 ms