Protein–RNA interactions for Protein: P52954

LBX1, Transcription factor LBX1, humanhuman

Predictions only

Length 281 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LBX1P52954 TSPAN11-204ENST00000546076 1058 ntAPPRIS P1 TSL 2 BASIC20.19■□□□□ 0.82
LBX1P52954 MIR4525-201ENST00000580000 75 ntBASIC20.19■□□□□ 0.82
LBX1P52954 AP005482.2-201ENST00000587889 310 ntTSL 5 BASIC20.19■□□□□ 0.82
LBX1P52954 KLC2-207ENST00000421552 2721 ntTSL 5 BASIC20.19■□□□□ 0.82
LBX1P52954 ASIC3-202ENST00000349064 1895 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
LBX1P52954 MAGEF1-201ENST00000317897 1636 ntAPPRIS P1 BASIC20.19■□□□□ 0.82
LBX1P52954 GLB1-201ENST00000307363 2616 ntAPPRIS P4 TSL 1 (best) BASIC20.19■□□□□ 0.82
LBX1P52954 TAF7-201ENST00000313368 2334 ntAPPRIS P1 BASIC20.19■□□□□ 0.82
LBX1P52954 PTGES2-202ENST00000338961 2331 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
LBX1P52954 LIMS2-207ENST00000409808 2315 ntAPPRIS ALT1 TSL 5 BASIC20.19■□□□□ 0.82
LBX1P52954 FDXR-203ENST00000420580 1705 ntTSL 2 BASIC20.19■□□□□ 0.82
LBX1P52954 MYC-205ENST00000524013 2150 ntAPPRIS ALT1 TSL 1 (best) BASIC20.18■□□□□ 0.82
LBX1P52954 ANXA8-208ENST00000611843 2174 ntTSL 2 BASIC20.18■□□□□ 0.82
LBX1P52954 DNAAF3-207ENST00000527223 2228 ntAPPRIS ALT2 TSL 2 BASIC20.18■□□□□ 0.82
LBX1P52954 CPEB1-214ENST00000617522 2220 ntTSL 5 BASIC20.18■□□□□ 0.82
LBX1P52954 LPCAT4-201ENST00000314891 2262 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
LBX1P52954 SH3BP2-202ENST00000435136 2318 ntAPPRIS P3 TSL 2 BASIC20.18■□□□□ 0.82
LBX1P52954 MED17-221ENST00000639724 2317 ntTSL 5 BASIC20.18■□□□□ 0.82
LBX1P52954 HLA-A-203ENST00000376809 1611 ntAPPRIS P1 BASIC20.18■□□□□ 0.82
LBX1P52954 ZSCAN2-203ENST00000334141 993 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
LBX1P52954 MRPS18AP1-201ENST00000414458 589 ntBASIC20.18■□□□□ 0.82
LBX1P52954 NME6-203ENST00000415644 849 ntTSL 2 BASIC20.18■□□□□ 0.82
LBX1P52954 Z94721.1-201ENST00000444102 385 ntTSL 5 BASIC20.18■□□□□ 0.82
LBX1P52954 AC069120.2-201ENST00000524091 540 ntBASIC20.18■□□□□ 0.82
LBX1P52954 MRPS23-202ENST00000578444 580 ntTSL 2 BASIC20.18■□□□□ 0.82
LBX1P52954 AC027575.2-201ENST00000585258 1295 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
LBX1P52954 AC010336.6-201ENST00000595107 528 ntTSL 4 BASIC20.18■□□□□ 0.82
LBX1P52954 SLC9A3-AS1-204ENST00000606288 791 ntTSL 2 BASIC20.18■□□□□ 0.82
LBX1P52954 MIR6805-201ENST00000615055 62 ntBASIC20.18■□□□□ 0.82
LBX1P52954 AC243571.2-201ENST00000615265 628 ntTSL 3 BASIC20.18■□□□□ 0.82
LBX1P52954 SDHAP2-201ENST00000455183 2001 ntBASIC20.18■□□□□ 0.82
LBX1P52954 IL25-201ENST00000329715 1315 ntAPPRIS P3 TSL 1 (best) BASIC20.18■□□□□ 0.82
LBX1P52954 RYK-209ENST00000623711 2934 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
LBX1P52954 DACT1-204ENST00000541264 2610 ntAPPRIS ALT2 TSL 2 BASIC20.18■□□□□ 0.82
LBX1P52954 ZBTB46-202ENST00000302995 2335 ntAPPRIS P1 TSL 2 BASIC20.18■□□□□ 0.82
LBX1P52954 ACTL6B-201ENST00000160382 1537 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
LBX1P52954 WRNIP1-205ENST00000618555 2651 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
LBX1P52954 ASB12-201ENST00000362002 1289 ntAPPRIS P1 TSL 2 BASIC20.17■□□□□ 0.82
LBX1P52954 TNNC2-201ENST00000372555 710 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
LBX1P52954 TNNC2-202ENST00000372557 780 ntTSL 3 BASIC20.17■□□□□ 0.82
LBX1P52954 C6orf52-202ENST00000379586 430 ntAPPRIS ALT2 TSL 2 BASIC20.17■□□□□ 0.82
LBX1P52954 MIR658-201ENST00000385210 100 ntBASIC20.17■□□□□ 0.82
LBX1P52954 AC093151.3-201ENST00000425554 623 ntTSL 2 BASIC20.17■□□□□ 0.82
LBX1P52954 ACA64.2-201ENST00000459014 129 ntBASIC20.17■□□□□ 0.82
LBX1P52954 AC004890.2-204ENST00000481968 304 ntBASIC20.17■□□□□ 0.82
LBX1P52954 GIMAP3P-201ENST00000495150 836 ntBASIC20.17■□□□□ 0.82
LBX1P52954 FAM8A2P-201ENST00000528813 1142 ntBASIC20.17■□□□□ 0.82
LBX1P52954 DRAP1-208ENST00000532933 751 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
LBX1P52954 GALNT9-208ENST00000541995 1001 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
LBX1P52954 KREMEN2-201ENST00000303746 2326 ntAPPRIS P4 TSL 1 (best) BASIC20.17■□□□□ 0.82
LBX1P52954 FAM57A-202ENST00000308278 2412 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
LBX1P52954 TANGO2-217ENST00000456048 2439 ntTSL 2 BASIC20.17■□□□□ 0.82
LBX1P52954 ADAD1-203ENST00000388725 1918 ntTSL 2 BASIC20.17■□□□□ 0.82
LBX1P52954 KRT16P3-203ENST00000580621 1939 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
LBX1P52954 AL353593.2-201ENST00000602529 1483 ntBASIC20.17■□□□□ 0.82
LBX1P52954 FARSA-207ENST00000588025 2057 ntTSL 5 BASIC20.17■□□□□ 0.82
LBX1P52954 ST3GAL3-219ENST00000372374 2170 ntTSL 5 BASIC20.17■□□□□ 0.82
LBX1P52954 AC010460.3-201ENST00000511359 1579 ntBASIC20.17■□□□□ 0.82
LBX1P52954 CFAP77-203ENST00000393216 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
LBX1P52954 MGAT3-201ENST00000341184 5062 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
LBX1P52954 UBL4A-202ENST00000369660 2382 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
LBX1P52954 LBX2-AS1-201ENST00000548978 1852 ntTSL 3 BASIC20.16■□□□□ 0.82
LBX1P52954 MRNIP-201ENST00000292586 1238 ntAPPRIS P4 TSL 1 (best) BASIC20.16■□□□□ 0.82
LBX1P52954 YBEY-202ENST00000339195 890 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
LBX1P52954 PRDX5-202ENST00000347941 463 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
LBX1P52954 VCX3B-202ENST00000381032 1171 ntAPPRIS P2 TSL 5 BASIC20.16■□□□□ 0.82
LBX1P52954 AC080129.2-201ENST00000418353 430 ntTSL 3 BASIC20.16■□□□□ 0.82
LBX1P52954 AC124057.1-201ENST00000433035 404 ntTSL 5 BASIC20.16■□□□□ 0.82
LBX1P52954 S100A2-206ENST00000497140 697 ntTSL 2 BASIC20.16■□□□□ 0.82
LBX1P52954 AC008115.1-201ENST00000542291 150 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
LBX1P52954 AP000275.2-202ENST00000553001 929 ntTSL 5 BASIC20.16■□□□□ 0.82
LBX1P52954 INO80E-210ENST00000567705 880 ntTSL 3 BASIC20.16■□□□□ 0.82
LBX1P52954 ARL16-202ENST00000570561 768 ntTSL 2 BASIC20.16■□□□□ 0.82
LBX1P52954 AIPL1-209ENST00000575265 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
LBX1P52954 CYB561-216ENST00000582297 897 ntTSL 3 BASIC20.16■□□□□ 0.82
LBX1P52954 RETN-203ENST00000629642 400 ntTSL 5 BASIC20.16■□□□□ 0.82
LBX1P52954 GGN-201ENST00000334928 2239 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
LBX1P52954 GID4-202ENST00000376345 1391 ntTSL 3 BASIC20.16■□□□□ 0.82
LBX1P52954 NEURL4-201ENST00000315614 5182 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
LBX1P52954 MTMR14-201ENST00000296003 2494 ntAPPRIS P4 TSL 1 (best) BASIC20.16■□□□□ 0.82
LBX1P52954 SNX19-207ENST00000528555 1506 ntTSL 2 BASIC20.16■□□□□ 0.82
LBX1P52954 LINC00271-201ENST00000421378 1580 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
LBX1P52954 TRMT44-205ENST00000513449 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
LBX1P52954 ZNF843-203ENST00000618063 1765 ntAPPRIS P2 TSL 1 (best) BASIC20.16■□□□□ 0.82
LBX1P52954 SOS2-201ENST00000216373 5498 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
LBX1P52954 CYP4F8-210ENST00000612078 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
LBX1P52954 NOTCH2NL-204ENST00000579793 1954 ntAPPRIS ALT2 TSL 2 BASIC20.15■□□□□ 0.82
LBX1P52954 LBX2-AS1-202ENST00000603175 2083 ntBASIC20.15■□□□□ 0.82
LBX1P52954 NCKAP1-201ENST00000360982 4989 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
LBX1P52954 CABLES1-201ENST00000256925 5002 ntAPPRIS P4 TSL 1 (best) BASIC20.15■□□□□ 0.82
LBX1P52954 PODXL2-201ENST00000342480 2186 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
LBX1P52954 EGLN2-202ENST00000406058 2150 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
LBX1P52954 C1QL3-201ENST00000298943 2493 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
LBX1P52954 CALY-202ENST00000368555 783 ntTSL 2 BASIC20.15■□□□□ 0.82
LBX1P52954 CYSRT1-201ENST00000409414 1297 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
LBX1P52954 PSMA8-203ENST00000415576 1280 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
LBX1P52954 ZNF576-206ENST00000533118 867 ntAPPRIS P1 TSL 2 BASIC20.15■□□□□ 0.82
LBX1P52954 RAB34-224ENST00000636513 888 ntTSL 5 BASIC20.15■□□□□ 0.82
LBX1P52954 TWIST2-202ENST00000612363 1404 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
LBX1P52954 WHAMM-201ENST00000286760 5101 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 29.4 ms