Protein–RNA interactions for Protein: P52655

GTF2A1, Transcription initiation factor IIA subunit 1, humanhuman

Predicted RBP Predictions only

Length 376 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2A1P52655 CLEC18B-206ENST00000620745 1847 ntTSL 5 BASIC17.69■□□□□ 0.42
GTF2A1P52655 FAM104A-201ENST00000403627 2798 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
GTF2A1P52655 CLCNKA-203ENST00000439316 1997 ntTSL 2 BASIC17.69■□□□□ 0.42
GTF2A1P52655 BANP-203ENST00000393207 2438 ntTSL 2 BASIC17.69■□□□□ 0.42
GTF2A1P52655 LETM2-202ENST00000379957 1873 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
GTF2A1P52655 ATP6V0E2-212ENST00000611515 2565 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
GTF2A1P52655 ARPC5L-201ENST00000259477 1325 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
GTF2A1P52655 CDC42SE2-206ENST00000503291 2025 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
GTF2A1P52655 DCAF17-202ENST00000375255 5828 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
GTF2A1P52655 AL662899.1-201ENST00000461287 2332 ntAPPRIS P1 TSL 2 BASIC17.69■□□□□ 0.42
GTF2A1P52655 PNKP-215ENST00000600910 1600 ntTSL 5 BASIC17.69■□□□□ 0.42
GTF2A1P52655 MGME1-202ENST00000377709 1936 ntTSL 2 BASIC17.68■□□□□ 0.42
GTF2A1P52655 C17orf62-201ENST00000306645 2093 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
GTF2A1P52655 DIAPH2-204ENST00000373054 3376 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
GTF2A1P52655 PAPLN-202ENST00000340738 5834 ntAPPRIS P2 TSL 5 BASIC17.68■□□□□ 0.42
GTF2A1P52655 FAM219A-204ENST00000379081 3543 ntTSL 5 BASIC17.68■□□□□ 0.42
GTF2A1P52655 PCDHA3-201ENST00000522353 5260 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
GTF2A1P52655 FBN1-205ENST00000560355 4109 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
GTF2A1P52655 CD55-203ENST00000367063 1691 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
GTF2A1P52655 OGG1-204ENST00000339511 1815 ntTSL 2 BASIC17.68■□□□□ 0.42
GTF2A1P52655 SIGLEC10-201ENST00000339313 2256 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
GTF2A1P52655 BCAR1-207ENST00000538440 3192 ntAPPRIS ALT2 TSL 2 BASIC17.68■□□□□ 0.42
GTF2A1P52655 DESI2-201ENST00000263831 859 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
GTF2A1P52655 HEXDC-201ENST00000327949 1733 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
GTF2A1P52655 H1F0-201ENST00000340857 2344 ntAPPRIS P1 BASIC17.68■□□□□ 0.42
GTF2A1P52655 DMPK-202ENST00000343373 3227 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
GTF2A1P52655 STX10-202ENST00000343587 1128 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
GTF2A1P52655 AXL-202ENST00000359092 3206 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
GTF2A1P52655 PHLDA3-201ENST00000367309 896 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
GTF2A1P52655 PCGF3-202ENST00000400151 1175 ntTSL 2 BASIC17.68■□□□□ 0.42
GTF2A1P52655 LINC01816-201ENST00000414141 662 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
GTF2A1P52655 PRDM11-201ENST00000424263 1858 ntAPPRIS P3 TSL 2 BASIC17.68■□□□□ 0.42
GTF2A1P52655 HLA-G-205ENST00000428701 1578 ntAPPRIS P2 BASIC17.68■□□□□ 0.42
GTF2A1P52655 SPAG1-206ENST00000520643 1723 ntTSL 2 BASIC17.68■□□□□ 0.42
GTF2A1P52655 RHOF-204ENST00000537265 699 ntTSL 2 BASIC17.68■□□□□ 0.42
GTF2A1P52655 AL137779.2-201ENST00000554859 448 ntTSL 2 BASIC17.68■□□□□ 0.42
GTF2A1P52655 IGFALS-203ENST00000568221 730 ntTSL 4 BASIC17.68■□□□□ 0.42
GTF2A1P52655 KIAA1841-201ENST00000295031 3116 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
GTF2A1P52655 AC114490.1-201ENST00000417456 3163 ntTSL 2 BASIC17.68■□□□□ 0.42
GTF2A1P52655 CDIPT-210ENST00000570016 1346 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
GTF2A1P52655 RFPL2-203ENST00000400237 2407 ntAPPRIS P3 TSL 2 BASIC17.68■□□□□ 0.42
GTF2A1P52655 ELK1-203ENST00000376983 2258 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
GTF2A1P52655 FABP1-202ENST00000393750 1839 ntTSL 2 BASIC17.68■□□□□ 0.42
GTF2A1P52655 SHROOM4-201ENST00000289292 6261 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
GTF2A1P52655 PNKD-202ENST00000258362 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
GTF2A1P52655 PITPNM2-208ENST00000542749 6660 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
GTF2A1P52655 CERKL-204ENST00000374970 1392 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
GTF2A1P52655 STAT5A-211ENST00000590949 3318 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
GTF2A1P52655 PCDHA6-202ENST00000527624 2231 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
GTF2A1P52655 PHF10-202ENST00000366780 1589 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
GTF2A1P52655 CEP170B-202ENST00000414716 6705 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
GTF2A1P52655 FAM214B-202ENST00000378557 3070 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
GTF2A1P52655 CDH24-202ENST00000397359 3552 ntTSL 5 BASIC17.67■□□□□ 0.42
GTF2A1P52655 NUDT16-203ENST00000537561 5943 ntTSL 5 BASIC17.67■□□□□ 0.42
GTF2A1P52655 COBL-210ENST00000632460 1941 ntTSL 5 BASIC17.67■□□□□ 0.42
GTF2A1P52655 MIOS-201ENST00000340080 3453 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
GTF2A1P52655 GABRB1-201ENST00000295454 2143 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
GTF2A1P52655 MANBAL-202ENST00000373606 1208 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
GTF2A1P52655 ATPIF1-204ENST00000497986 599 ntTSL 2 BASIC17.67■□□□□ 0.42
GTF2A1P52655 SUDS3P1-201ENST00000505831 966 ntBASIC17.67■□□□□ 0.42
GTF2A1P52655 SLC9A7P1-201ENST00000554295 3311 ntBASIC17.67■□□□□ 0.42
GTF2A1P52655 EPS8L2-218ENST00000530636 2469 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
GTF2A1P52655 GGA1-203ENST00000343632 3159 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
GTF2A1P52655 BACE1-209ENST00000513780 1465 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
GTF2A1P52655 NAT6-205ENST00000443842 1820 ntAPPRIS ALT2 TSL 2 BASIC17.67■□□□□ 0.42
GTF2A1P52655 PELI3-209ENST00000618547 2508 ntTSL 2 BASIC17.67■□□□□ 0.42
GTF2A1P52655 RASA4B-202ENST00000465829 2931 ntAPPRIS ALT1 TSL 1 (best) BASIC17.67■□□□□ 0.42
GTF2A1P52655 HNRNPUL1-220ENST00000602130 2932 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
GTF2A1P52655 NKAIN1-201ENST00000373736 2589 ntAPPRIS P1 TSL 2 BASIC17.67■□□□□ 0.42
GTF2A1P52655 SPPL2C-201ENST00000329196 2238 ntAPPRIS P1 BASIC17.67■□□□□ 0.42
GTF2A1P52655 PSMD12-202ENST00000357146 2437 ntTSL 2 BASIC17.67■□□□□ 0.42
GTF2A1P52655 FLOT2-202ENST00000394908 2618 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
GTF2A1P52655 NUTM2D-202ENST00000412718 5543 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
GTF2A1P52655 FGF17-201ENST00000359441 1714 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
GTF2A1P52655 CA7-202ENST00000394069 1713 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
GTF2A1P52655 LGR6-205ENST00000439764 2487 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
GTF2A1P52655 ANO1-201ENST00000316296 2118 ntTSL 2 BASIC17.66■□□□□ 0.42
GTF2A1P52655 FZD4-201ENST00000531380 7383 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
GTF2A1P52655 SLC22A18-203ENST00000380574 1755 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
GTF2A1P52655 NEIL1-221ENST00000569035 1797 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
GTF2A1P52655 REEP3-201ENST00000373758 5205 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
GTF2A1P52655 CHL1-202ENST00000397491 5235 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
GTF2A1P52655 RBM17P2-201ENST00000616397 1405 ntBASIC17.66■□□□□ 0.42
GTF2A1P52655 FAM8A1-201ENST00000259963 4677 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
GTF2A1P52655 FAM45BP-202ENST00000592932 1624 ntBASIC17.66■□□□□ 0.42
GTF2A1P52655 FAM181A-201ENST00000267594 1816 ntTSL 2 BASIC17.66■□□□□ 0.42
GTF2A1P52655 NGFR-201ENST00000172229 3417 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
GTF2A1P52655 C4orf48-201ENST00000409248 433 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
GTF2A1P52655 C4orf48-202ENST00000409860 477 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
GTF2A1P52655 NKX2-2-AS1-201ENST00000549659 638 ntTSL 5 BASIC17.66■□□□□ 0.42
GTF2A1P52655 AC011511.3-201ENST00000587088 355 ntTSL 2 BASIC17.66■□□□□ 0.42
GTF2A1P52655 ELANE-202ENST00000590230 1028 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
GTF2A1P52655 FAM21FP-204ENST00000608637 956 ntBASIC17.66■□□□□ 0.42
GTF2A1P52655 AC010999.2-201ENST00000621974 596 ntTSL 2 BASIC17.66■□□□□ 0.42
GTF2A1P52655 GATA1-202ENST00000376670 1497 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
GTF2A1P52655 SCAMP2-201ENST00000268099 2453 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
GTF2A1P52655 PRPF31-201ENST00000321030 2126 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
GTF2A1P52655 CAMKK2-203ENST00000347034 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
GTF2A1P52655 PPP2CA-203ENST00000481195 4649 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
GTF2A1P52655 EHHADH-203ENST00000456310 2577 ntTSL 2 BASIC17.66■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 44.7 ms