Protein–RNA interactions for Protein: P51800

CLCNKA, Chloride channel protein ClC-Ka, humanhuman

Predictions only

Length 687 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCNKAP51800 SULT2B1-201ENST00000201586 1295 ntAPPRIS P4 TSL 1 (best) BASIC17.64■□□□□ 0.41
CLCNKAP51800 CCDC7-203ENST00000362006 2133 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.41
CLCNKAP51800 GNB1L-203ENST00000405009 1076 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
CLCNKAP51800 MRPS24-203ENST00000418740 743 ntTSL 2 BASIC17.64■□□□□ 0.41
CLCNKAP51800 POM121L3P-201ENST00000419331 1163 ntBASIC17.64■□□□□ 0.41
CLCNKAP51800 KRBOX1-AS1-201ENST00000447834 2134 ntTSL 2 BASIC17.64■□□□□ 0.41
CLCNKAP51800 LINC00882-201ENST00000473636 710 ntTSL 3 BASIC17.64■□□□□ 0.41
CLCNKAP51800 AC105202.1-201ENST00000517833 995 ntTSL 3 BASIC17.64■□□□□ 0.41
CLCNKAP51800 DUTP2-201ENST00000519164 463 ntBASIC17.64■□□□□ 0.41
CLCNKAP51800 AC005625.1-201ENST00000590304 472 ntTSL 3 BASIC17.64■□□□□ 0.41
CLCNKAP51800 AL121772.3-201ENST00000610840 674 ntBASIC17.64■□□□□ 0.41
CLCNKAP51800 PSMD8-207ENST00000592035 1581 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
CLCNKAP51800 FBXO41-205ENST00000521871 7336 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
CLCNKAP51800 SAMD14-203ENST00000503131 1938 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
CLCNKAP51800 TAF4B-201ENST00000269142 5260 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
CLCNKAP51800 NOMO2-201ENST00000330537 4352 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.41
CLCNKAP51800 AHCYL2-201ENST00000325006 5056 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
CLCNKAP51800 UVSSA-207ENST00000511216 2927 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.41
CLCNKAP51800 CDK13-201ENST00000181839 7298 ntAPPRIS P4 TSL 1 (best) BASIC17.64■□□□□ 0.41
CLCNKAP51800 P3H1-204ENST00000397054 2705 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
CLCNKAP51800 CCDC34-201ENST00000317945 2109 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
CLCNKAP51800 DHRS4L2-203ENST00000534993 1450 ntTSL 3 BASIC17.63■□□□□ 0.41
CLCNKAP51800 RNF114-201ENST00000244061 2503 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CLCNKAP51800 ADGRA3-202ENST00000334304 4566 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CLCNKAP51800 TSEN34-202ENST00000396383 1548 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CLCNKAP51800 NSUN5P1-202ENST00000421140 1535 ntBASIC17.63■□□□□ 0.41
CLCNKAP51800 NSUN5P2-203ENST00000457352 1529 ntBASIC17.63■□□□□ 0.41
CLCNKAP51800 MTMR12-201ENST00000264934 2215 ntTSL 2 BASIC17.63■□□□□ 0.41
CLCNKAP51800 PLK1-201ENST00000300093 2227 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CLCNKAP51800 MATN4-203ENST00000372754 2200 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
CLCNKAP51800 SP100-208ENST00000427101 1922 ntTSL 2 BASIC17.63■□□□□ 0.41
CLCNKAP51800 AC027312.1-201ENST00000523591 1571 ntTSL 5 BASIC17.63■□□□□ 0.41
CLCNKAP51800 PIF1-205ENST00000559239 2677 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CLCNKAP51800 TCTN1-225ENST00000551590 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
CLCNKAP51800 MRPS34-201ENST00000177742 1040 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
CLCNKAP51800 RPS19BP1-201ENST00000334678 927 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CLCNKAP51800 NPFFR2-202ENST00000344413 1234 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
CLCNKAP51800 BOLA1-201ENST00000369150 811 ntAPPRIS P1 TSL 3 BASIC17.63■□□□□ 0.41
CLCNKAP51800 ARMC12-202ENST00000373866 1254 ntAPPRIS P1 TSL 3 BASIC17.63■□□□□ 0.41
CLCNKAP51800 ZNF655-218ENST00000454654 571 ntTSL 4 BASIC17.63■□□□□ 0.41
CLCNKAP51800 AC091607.1-201ENST00000490318 1060 ntBASIC17.63■□□□□ 0.41
CLCNKAP51800 PACRGL-218ENST00000507634 1142 ntTSL 5 BASIC17.63■□□□□ 0.41
CLCNKAP51800 RAP1B-228ENST00000542145 1060 ntTSL 2 BASIC17.63■□□□□ 0.41
CLCNKAP51800 AC092338.2-202ENST00000567158 611 ntTSL 5 BASIC17.63■□□□□ 0.41
CLCNKAP51800 RNPS1-224ENST00000569598 918 ntTSL 5 BASIC17.63■□□□□ 0.41
CLCNKAP51800 AL732314.6-201ENST00000627721 484 ntTSL 4 BASIC17.63■□□□□ 0.41
CLCNKAP51800 RNF146-203ENST00000368314 2369 ntAPPRIS ALT1 TSL 2 BASIC17.63■□□□□ 0.41
CLCNKAP51800 PML-205ENST00000395132 1738 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
CLCNKAP51800 FBXL20-205ENST00000583610 1739 ntAPPRIS P1 TSL 2 BASIC17.63■□□□□ 0.41
CLCNKAP51800 TPGS2-219ENST00000593035 1727 ntAPPRIS ALT2 TSL 2 BASIC17.63■□□□□ 0.41
CLCNKAP51800 MPP5-201ENST00000261681 5552 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CLCNKAP51800 CPEB2-207ENST00000507071 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
CLCNKAP51800 FOXP4-202ENST00000373057 3300 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
CLCNKAP51800 CASP16P-202ENST00000575497 2161 ntTSL 2 BASIC17.63■□□□□ 0.41
CLCNKAP51800 WIPF1-206ENST00000409891 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
CLCNKAP51800 MADD-208ENST00000405573 1823 ntTSL 5 BASIC17.63■□□□□ 0.41
CLCNKAP51800 KIF25-AS1-201ENST00000414364 1420 ntTSL 2 BASIC17.63■□□□□ 0.41
CLCNKAP51800 AP003717.1-202ENST00000537019 1412 ntTSL 5 BASIC17.63■□□□□ 0.41
CLCNKAP51800 POR-209ENST00000439269 1858 ntTSL 2 BASIC17.63■□□□□ 0.41
CLCNKAP51800 AQP5-201ENST00000293599 1450 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CLCNKAP51800 PNCK-203ENST00000370145 1455 ntTSL 2 BASIC17.63■□□□□ 0.41
CLCNKAP51800 SEMA7A-203ENST00000543145 2304 ntTSL 2 BASIC17.63■□□□□ 0.41
CLCNKAP51800 FAM50B-202ENST00000380274 1932 ntAPPRIS P1 BASIC17.62■□□□□ 0.41
CLCNKAP51800 STMN3-202ENST00000540534 2351 ntTSL 2 BASIC17.62■□□□□ 0.41
CLCNKAP51800 TNPO2-201ENST00000356861 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CLCNKAP51800 UBE2QL1-201ENST00000399816 4317 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CLCNKAP51800 CD248-201ENST00000311330 2558 ntAPPRIS P1 BASIC17.62■□□□□ 0.41
CLCNKAP51800 ACSL6-205ENST00000379246 2622 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
CLCNKAP51800 MSLN-202ENST00000545450 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
CLCNKAP51800 PLCL2-204ENST00000615277 4147 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
CLCNKAP51800 EFTUD1P1-204ENST00000560401 1798 ntBASIC17.62■□□□□ 0.41
CLCNKAP51800 HBZ-201ENST00000252951 755 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CLCNKAP51800 AL596442.1-201ENST00000429305 429 ntTSL 2 BASIC17.62■□□□□ 0.41
CLCNKAP51800 EFCAB11-211ENST00000556609 568 ntTSL 3 BASIC17.62■□□□□ 0.41
CLCNKAP51800 AC016590.1-204ENST00000586442 813 ntTSL 5 BASIC17.62■□□□□ 0.41
CLCNKAP51800 AC005258.1-201ENST00000621615 1268 ntAPPRIS P1 TSL 2 BASIC17.62■□□□□ 0.41
CLCNKAP51800 CCNC-219ENST00000627680 896 ntTSL 5 BASIC17.62■□□□□ 0.41
CLCNKAP51800 GRB10-208ENST00000403097 5432 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
CLCNKAP51800 CCT6P1-202ENST00000442266 1317 ntTSL 2 BASIC17.62■□□□□ 0.41
CLCNKAP51800 FLYWCH1P1-201ENST00000460917 1874 ntBASIC17.62■□□□□ 0.41
CLCNKAP51800 MFSD2A-203ENST00000420632 1914 ntTSL 2 BASIC17.62■□□□□ 0.41
CLCNKAP51800 LINC00535-201ENST00000501400 1914 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
CLCNKAP51800 GATA2-202ENST00000430265 2525 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
CLCNKAP51800 ZIC3-202ENST00000370606 1968 ntTSL 5 BASIC17.62■□□□□ 0.41
CLCNKAP51800 SASH1-201ENST00000367467 7711 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CLCNKAP51800 LRRC29-201ENST00000393992 1468 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CLCNKAP51800 OTOP2-202ENST00000580223 2086 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CLCNKAP51800 CCDC17-209ENST00000528266 2181 ntAPPRIS P3 TSL 2 BASIC17.62■□□□□ 0.41
CLCNKAP51800 TDRKH-203ENST00000368824 2824 ntAPPRIS P2 TSL 1 (best) BASIC17.62■□□□□ 0.41
CLCNKAP51800 INTS10-201ENST00000397977 2804 ntAPPRIS P1 TSL 2 BASIC17.62■□□□□ 0.41
CLCNKAP51800 ZBTB10-205ENST00000610895 2833 ntAPPRIS ALT2 TSL 2 BASIC17.62■□□□□ 0.41
CLCNKAP51800 GPAT2P1-202ENST00000471661 1569 ntTSL 2 BASIC17.62■□□□□ 0.41
CLCNKAP51800 ACP5-201ENST00000218758 1630 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CLCNKAP51800 MMP9-201ENST00000372330 2336 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CLCNKAP51800 TTC19-201ENST00000261647 3002 ntAPPRIS P2 TSL 1 (best) BASIC17.61■□□□□ 0.41
CLCNKAP51800 RRP7BP-201ENST00000357802 2375 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
CLCNKAP51800 MORN1-203ENST00000378531 1798 ntAPPRIS P3 TSL 2 BASIC17.61■□□□□ 0.41
CLCNKAP51800 PCBP4-210ENST00000471622 1784 ntTSL 5 BASIC17.61■□□□□ 0.41
CLCNKAP51800 SLC25A43-201ENST00000217909 2783 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CLCNKAP51800 PCSK5-202ENST00000376767 2845 ntTSL 2 BASIC17.61■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 22.7 ms