Protein–RNA interactions for Protein: P51610

HCFC1, Host cell factor 1, humanhuman

Predictions only

Length 2,035 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC1P51610 ZNF517-202ENST00000525105 1383 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
HCFC1P51610 KHNYN-206ENST00000556842 2443 ntAPPRIS P1 TSL 2 BASIC15.64■□□□□ 0.09
HCFC1P51610 FKRP-202ENST00000391909 2801 ntAPPRIS P1 TSL 2 BASIC15.64■□□□□ 0.09
HCFC1P51610 TULP1-201ENST00000229771 2162 ntAPPRIS P2 TSL 1 (best) BASIC15.63■□□□□ 0.09
HCFC1P51610 ASPHD2-201ENST00000215906 3357 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
HCFC1P51610 TCEAL4-201ENST00000372629 1511 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
HCFC1P51610 AGAP4-201ENST00000311652 2715 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
HCFC1P51610 GSTZ1-202ENST00000349555 867 ntTSL 2 BASIC15.63■□□□□ 0.09
HCFC1P51610 FUOM-202ENST00000368551 628 ntTSL 3 BASIC15.63■□□□□ 0.09
HCFC1P51610 RFX3-AS1-201ENST00000423112 552 ntTSL 3 BASIC15.63■□□□□ 0.09
HCFC1P51610 RMDN1-202ENST00000430676 1106 ntTSL 2 BASIC15.63■□□□□ 0.09
HCFC1P51610 AC007967.3-201ENST00000434308 558 ntBASIC15.63■□□□□ 0.09
HCFC1P51610 NSUN5P1-208ENST00000473960 500 ntTSL 3 BASIC15.63■□□□□ 0.09
HCFC1P51610 AC105339.3-201ENST00000560043 636 ntBASIC15.63■□□□□ 0.09
HCFC1P51610 BLOC1S3-201ENST00000433642 2601 ntAPPRIS P1 TSL 2 BASIC15.63■□□□□ 0.09
HCFC1P51610 PARD3-213ENST00000545260 5740 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
HCFC1P51610 FOXL2-201ENST00000330315 2917 ntAPPRIS P1 BASIC15.63■□□□□ 0.09
HCFC1P51610 AC010460.3-201ENST00000511359 1579 ntBASIC15.63■□□□□ 0.09
HCFC1P51610 PML-205ENST00000395132 1738 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
HCFC1P51610 ETV4-201ENST00000319349 2429 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
HCFC1P51610 TMEM151B-202ENST00000451188 4895 ntAPPRIS P2 TSL 5 BASIC15.63■□□□□ 0.09
HCFC1P51610 TEPSIN-213ENST00000637944 1782 ntAPPRIS ALT2 TSL 5 BASIC15.63■□□□□ 0.09
HCFC1P51610 MB21D1-202ENST00000370318 1917 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
HCFC1P51610 C11orf80-214ENST00000532565 1948 ntAPPRIS ALT2 TSL 5 BASIC15.63■□□□□ 0.09
HCFC1P51610 DHRS4L2-201ENST00000335125 1370 ntAPPRIS P2 TSL 1 (best) BASIC15.63■□□□□ 0.09
HCFC1P51610 P2RY6-204ENST00000393592 1515 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
HCFC1P51610 DAP3-214ENST00000471642 1671 ntTSL 5 BASIC15.63■□□□□ 0.09
HCFC1P51610 TTLL10-203ENST00000379290 2283 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
HCFC1P51610 TMEM147-201ENST00000222284 899 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
HCFC1P51610 UTP18-201ENST00000225298 1894 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
HCFC1P51610 NXPH2-201ENST00000272641 1052 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
HCFC1P51610 TTC7A-201ENST00000319190 5157 ntAPPRIS P1 TSL 2 BASIC15.63■□□□□ 0.09
HCFC1P51610 MOV10L1-203ENST00000395852 1422 ntTSL 2 BASIC15.63■□□□□ 0.09
HCFC1P51610 PMP22-202ENST00000395936 816 ntTSL 3 BASIC15.63■□□□□ 0.09
HCFC1P51610 IMP4-203ENST00000409935 958 ntTSL 5 BASIC15.63■□□□□ 0.09
HCFC1P51610 KIF25-AS1-201ENST00000414364 1420 ntTSL 2 BASIC15.63■□□□□ 0.09
HCFC1P51610 KRT18P27-201ENST00000427733 1299 ntBASIC15.63■□□□□ 0.09
HCFC1P51610 DNAJB3-201ENST00000446806 729 ntBASIC15.63■□□□□ 0.09
HCFC1P51610 NDUFB2-208ENST00000471136 499 ntTSL 3 BASIC15.63■□□□□ 0.09
HCFC1P51610 TMUB1-204ENST00000476627 882 ntAPPRIS P1 TSL 3 BASIC15.63■□□□□ 0.09
HCFC1P51610 MSRA-206ENST00000521209 814 ntTSL 3 BASIC15.63■□□□□ 0.09
HCFC1P51610 AC068389.2-201ENST00000529518 430 ntTSL 2 BASIC15.63■□□□□ 0.09
HCFC1P51610 ARAP1-AS1-201ENST00000542022 388 ntTSL 5 BASIC15.63■□□□□ 0.09
HCFC1P51610 AHSA1-208ENST00000555517 832 ntTSL 2 BASIC15.63■□□□□ 0.09
HCFC1P51610 ETFA-208ENST00000559602 792 ntTSL 3 BASIC15.63■□□□□ 0.09
HCFC1P51610 AC009041.2-206ENST00000563863 1728 ntTSL 2 BASIC15.63■□□□□ 0.09
HCFC1P51610 AC027796.2-201ENST00000575326 344 ntBASIC15.63■□□□□ 0.09
HCFC1P51610 AL355385.1-201ENST00000606123 409 ntBASIC15.63■□□□□ 0.09
HCFC1P51610 LUC7L2-210ENST00000619796 2783 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
HCFC1P51610 FAM157B-201ENST00000446912 1795 ntTSL 2 BASIC15.63■□□□□ 0.09
HCFC1P51610 POLR2M-206ENST00000494490 1648 ntTSL 5 BASIC15.63■□□□□ 0.09
HCFC1P51610 FIP1L1-207ENST00000507922 1335 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
HCFC1P51610 OGFOD2-207ENST00000536150 1956 ntTSL 2 BASIC15.62■□□□□ 0.09
HCFC1P51610 C21orf59-201ENST00000290155 1692 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
HCFC1P51610 RBFOX1-204ENST00000422070 1684 ntTSL 2 BASIC15.62■□□□□ 0.09
HCFC1P51610 PYCR2-208ENST00000612039 1549 ntTSL 3 BASIC15.62■□□□□ 0.09
HCFC1P51610 PYCR2-209ENST00000612651 1538 ntTSL 5 BASIC15.62■□□□□ 0.09
HCFC1P51610 SERPINE2-206ENST00000447280 1716 ntTSL 2 BASIC15.62■□□□□ 0.09
HCFC1P51610 FBXL20-205ENST00000583610 1739 ntAPPRIS P1 TSL 2 BASIC15.62■□□□□ 0.09
HCFC1P51610 ADAP1-205ENST00000449296 2093 ntTSL 2 BASIC15.62■□□□□ 0.09
HCFC1P51610 NRN1-204ENST00000622188 1795 ntTSL 2 BASIC15.62■□□□□ 0.09
HCFC1P51610 GOSR2-201ENST00000225567 1245 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
HCFC1P51610 SMIM11A-202ENST00000399295 1074 ntAPPRIS P1 TSL 2 BASIC15.62■□□□□ 0.09
HCFC1P51610 KLF4P1-201ENST00000412782 1185 ntBASIC15.62■□□□□ 0.09
HCFC1P51610 AC007364.1-201ENST00000449714 1022 ntTSL 2 BASIC15.62■□□□□ 0.09
HCFC1P51610 RNA5SP416-201ENST00000516838 111 ntBASIC15.62■□□□□ 0.09
HCFC1P51610 MIR1199-201ENST00000621445 119 ntBASIC15.62■□□□□ 0.09
HCFC1P51610 SLC26A1-205ENST00000622731 1057 ntTSL 5 BASIC15.62■□□□□ 0.09
HCFC1P51610 SMIM11B-207ENST00000624758 1074 ntAPPRIS P1 TSL 2 BASIC15.62■□□□□ 0.09
HCFC1P51610 ADORA1-209ENST00000640524 653 ntTSL 5 BASIC15.62■□□□□ 0.09
HCFC1P51610 AQP5-201ENST00000293599 1450 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
HCFC1P51610 MBD1-208ENST00000398493 1845 ntTSL 5 BASIC15.62■□□□□ 0.09
HCFC1P51610 AC022898.2-201ENST00000616822 1312 ntBASIC15.62■□□□□ 0.09
HCFC1P51610 ADAM33-202ENST00000356518 3677 ntAPPRIS P3 TSL 1 (best) BASIC15.62■□□□□ 0.09
HCFC1P51610 DBNL-213ENST00000452943 1513 ntTSL 2 BASIC15.62■□□□□ 0.09
HCFC1P51610 C11orf68-203ENST00000530188 1528 ntAPPRIS ALT2 BASIC15.62■□□□□ 0.09
HCFC1P51610 UMOD-202ENST00000396134 2408 ntAPPRIS ALT2 TSL 2 BASIC15.62■□□□□ 0.09
HCFC1P51610 GRB10-205ENST00000401949 2627 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
HCFC1P51610 AC242426.3-201ENST00000440377 1571 ntTSL 2 BASIC15.62■□□□□ 0.09
HCFC1P51610 STYXL1-208ENST00000451157 1570 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
HCFC1P51610 ZIC4-212ENST00000484399 1774 ntAPPRIS P1 TSL 2 BASIC15.62■□□□□ 0.09
HCFC1P51610 ADGRD2-201ENST00000334810 3244 ntAPPRIS P1 TSL 5 BASIC15.62■□□□□ 0.09
HCFC1P51610 TNNT1-201ENST00000291901 967 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
HCFC1P51610 PF4-201ENST00000296029 604 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
HCFC1P51610 KIRREL3-AS3-201ENST00000404882 831 ntBASIC15.61■□□□□ 0.09
HCFC1P51610 AC096633.1-201ENST00000422446 749 ntBASIC15.61■□□□□ 0.09
HCFC1P51610 FIS1-203ENST00000442303 631 ntTSL 3 BASIC15.61■□□□□ 0.09
HCFC1P51610 AC027117.2-201ENST00000522768 510 ntTSL 3 BASIC15.61■□□□□ 0.09
HCFC1P51610 L2HGDH-206ENST00000555610 804 ntTSL 5 BASIC15.61■□□□□ 0.09
HCFC1P51610 LINC01842-201ENST00000588275 768 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
HCFC1P51610 COPE-211ENST00000600932 1144 ntTSL 5 BASIC15.61■□□□□ 0.09
HCFC1P51610 LCE1E-203ENST00000619588 267 ntAPPRIS ALT2 TSL 5 BASIC15.61■□□□□ 0.09
HCFC1P51610 LRRC27-203ENST00000368613 2113 ntAPPRIS P3 TSL 1 (best) BASIC15.61■□□□□ 0.09
HCFC1P51610 CYP2D7-208ENST00000614967 1504 ntTSL 5 BASIC15.61■□□□□ 0.09
HCFC1P51610 MXRA7-201ENST00000355797 5661 ntAPPRIS P4 TSL 2 BASIC15.61■□□□□ 0.09
HCFC1P51610 CCNA1-202ENST00000440264 1758 ntAPPRIS P1 TSL 2 BASIC15.61■□□□□ 0.09
HCFC1P51610 C1QTNF1-201ENST00000311661 2624 ntTSL 2 BASIC15.61■□□□□ 0.09
HCFC1P51610 PTPRJ-207ENST00000613246 7851 ntAPPRIS ALT2 TSL 5 BASIC15.61■□□□□ 0.09
HCFC1P51610 C16orf70-208ENST00000569600 1353 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
HCFC1P51610 AC002310.6-201ENST00000624451 1377 ntBASIC15.61■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 53 ms