Protein–RNA interactions for Protein: P51571

SSR4, Translocon-associated protein subunit delta, humanhuman

Predictions only

Length 173 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSR4P51571 SDCBP2-201ENST00000339987 1404 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
SSR4P51571 MEG3-211ENST00000452514 461 ntTSL 3 BASIC16.49■□□□□ 0.23
SSR4P51571 STK32A-AS1-201ENST00000504297 863 ntTSL 3 BASIC16.49■□□□□ 0.23
SSR4P51571 DUTP2-201ENST00000519164 463 ntBASIC16.49■□□□□ 0.23
SSR4P51571 TMEM135-209ENST00000532959 1149 ntTSL 2 BASIC16.49■□□□□ 0.23
SSR4P51571 LINGO1-AS2-201ENST00000557799 663 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
SSR4P51571 AC021739.5-201ENST00000558637 494 ntTSL 3 BASIC16.49■□□□□ 0.23
SSR4P51571 TRAF7-205ENST00000567653 666 ntTSL 2 BASIC16.49■□□□□ 0.23
SSR4P51571 CCDC61-202ENST00000594087 1017 ntAPPRIS ALT2 TSL 5 BASIC16.49■□□□□ 0.23
SSR4P51571 PLAUR-214ENST00000601723 1205 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
SSR4P51571 AL591684.3-201ENST00000605187 298 ntBASIC16.49■□□□□ 0.23
SSR4P51571 PYCR1-217ENST00000629768 1740 ntTSL 5 BASIC16.49■□□□□ 0.23
SSR4P51571 PTTG1IP-203ENST00000397887 2413 ntTSL 4 BASIC16.49■□□□□ 0.23
SSR4P51571 RTEL1-204ENST00000370003 2273 ntTSL 2 BASIC16.49■□□□□ 0.23
SSR4P51571 SDCBP-204ENST00000447182 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC16.49■□□□□ 0.23
SSR4P51571 BSG-201ENST00000333511 1974 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
SSR4P51571 NSUN5-201ENST00000252594 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
SSR4P51571 TMEM82-201ENST00000375782 1520 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
SSR4P51571 MAFF-207ENST00000538999 2365 ntTSL 2 BASIC16.49■□□□□ 0.23
SSR4P51571 ZBTB8A-201ENST00000316459 1943 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
SSR4P51571 SP100-208ENST00000427101 1922 ntTSL 2 BASIC16.49■□□□□ 0.23
SSR4P51571 TRIM63-201ENST00000374272 1770 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
SSR4P51571 PRR5-201ENST00000006251 1767 ntTSL 2 BASIC16.49■□□□□ 0.23
SSR4P51571 SEL1L-204ENST00000555824 1631 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
SSR4P51571 DNAAF4-202ENST00000348518 1897 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
SSR4P51571 CLDN6-202ENST00000396925 1739 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
SSR4P51571 TPGS2-219ENST00000593035 1727 ntAPPRIS ALT2 TSL 2 BASIC16.48■□□□□ 0.23
SSR4P51571 CRKL-201ENST00000354336 5325 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
SSR4P51571 UBXN10-AS1-201ENST00000442226 510 ntTSL 2 BASIC16.48■□□□□ 0.23
SSR4P51571 PLPP5-214ENST00000531823 875 ntTSL 3 BASIC16.48■□□□□ 0.23
SSR4P51571 AP000721.2-201ENST00000537170 650 ntTSL 4 BASIC16.48■□□□□ 0.23
SSR4P51571 COX5A-204ENST00000567270 579 ntTSL 3 BASIC16.48■□□□□ 0.23
SSR4P51571 MIR5100-201ENST00000579544 119 ntBASIC16.48■□□□□ 0.23
SSR4P51571 PPP1R1B-208ENST00000580825 1038 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
SSR4P51571 AC087289.1-201ENST00000586808 890 ntTSL 5 BASIC16.48■□□□□ 0.23
SSR4P51571 AC008738.3-201ENST00000589932 659 ntTSL 2 BASIC16.48■□□□□ 0.23
SSR4P51571 DNASE1L2-206ENST00000613572 1260 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
SSR4P51571 CCDC43-201ENST00000315286 2082 ntAPPRIS P2 TSL 1 (best) BASIC16.48■□□□□ 0.23
SSR4P51571 DBNDD2-204ENST00000372712 1537 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
SSR4P51571 TRMT2A-201ENST00000252136 2964 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
SSR4P51571 CDK10-202ENST00000353379 1798 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
SSR4P51571 SCRN2-202ENST00000407215 1779 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
SSR4P51571 FAM131A-202ENST00000340957 2421 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
SSR4P51571 DDX42-216ENST00000583590 4148 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
SSR4P51571 KCNN4-209ENST00000615047 2029 ntTSL 5 BASIC16.48■□□□□ 0.23
SSR4P51571 PLAUR-201ENST00000221264 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
SSR4P51571 TM2D2-201ENST00000397070 1631 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
SSR4P51571 POR-209ENST00000439269 1858 ntTSL 2 BASIC16.48■□□□□ 0.23
SSR4P51571 TMEM175-222ENST00000622959 1967 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
SSR4P51571 PLEKHH3-204ENST00000591022 2983 ntAPPRIS P2 TSL 1 (best) BASIC16.47■□□□□ 0.23
SSR4P51571 ZSWIM4-201ENST00000254323 4339 ntAPPRIS P1 TSL 2 BASIC16.47■□□□□ 0.23
SSR4P51571 VRK3-225ENST00000601912 1668 ntAPPRIS ALT2 TSL 5 BASIC16.47■□□□□ 0.23
SSR4P51571 EDEM1-201ENST00000256497 6146 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
SSR4P51571 COA5-201ENST00000328709 1754 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
SSR4P51571 CXorf58-201ENST00000379211 1752 ntAPPRIS P2 TSL 1 (best) BASIC16.47■□□□□ 0.23
SSR4P51571 TBC1D3P5-201ENST00000579401 1545 ntBASIC16.47■□□□□ 0.23
SSR4P51571 ATXN2-227ENST00000616825 4575 ntAPPRIS ALT2 TSL 5 BASIC16.47■□□□□ 0.23
SSR4P51571 SIT1-201ENST00000259608 1231 ntAPPRIS P2 TSL 1 (best) BASIC16.47■□□□□ 0.23
SSR4P51571 KCNAB2-205ENST00000378092 1202 ntAPPRIS ALT1 TSL 5 BASIC16.47■□□□□ 0.23
SSR4P51571 IGF2-202ENST00000381392 1005 ntAPPRIS ALT1 TSL 1 (best) BASIC16.47■□□□□ 0.23
SSR4P51571 TNFSF13-204ENST00000396542 726 ntTSL 3 BASIC16.47■□□□□ 0.23
SSR4P51571 DHRS4-203ENST00000397075 727 ntTSL 2 BASIC16.47■□□□□ 0.23
SSR4P51571 MRPL28-203ENST00000429738 310 ntTSL 2 BASIC16.47■□□□□ 0.23
SSR4P51571 AL591212.1-201ENST00000433646 615 ntTSL 5 BASIC16.47■□□□□ 0.23
SSR4P51571 ICAM2-203ENST00000449662 1221 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
SSR4P51571 EMBP1-201ENST00000458200 901 ntBASIC16.47■□□□□ 0.23
SSR4P51571 AC091133.2-201ENST00000505903 428 ntTSL 3 BASIC16.47■□□□□ 0.23
SSR4P51571 AL442663.3-201ENST00000554737 1000 ntTSL 3 BASIC16.47■□□□□ 0.23
SSR4P51571 FGF11-204ENST00000575235 928 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
SSR4P51571 IGHV3OR16-7-201ENST00000604106 360 ntBASIC16.47■□□□□ 0.23
SSR4P51571 PTENP1-AS-201ENST00000627688 873 ntTSL 5 BASIC16.47■□□□□ 0.23
SSR4P51571 CEACAM3-208ENST00000630848 1110 ntAPPRIS ALT2 TSL 5 BASIC16.47■□□□□ 0.23
SSR4P51571 PTPN11-207ENST00000639857 801 ntTSL 5 BASIC16.47■□□□□ 0.23
SSR4P51571 SMOC2-206ENST00000535039 1875 ntTSL 5 BASIC16.47■□□□□ 0.23
SSR4P51571 MCF2L-208ENST00000397030 6580 ntTSL 2 BASIC16.47■□□□□ 0.23
SSR4P51571 STRA6-209ENST00000563965 2565 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
SSR4P51571 MPZ-206ENST00000533357 1955 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
SSR4P51571 SNX11-201ENST00000359238 2315 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
SSR4P51571 BAZ1A-203ENST00000382422 5775 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
SSR4P51571 SIGIRR-203ENST00000431843 1720 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
SSR4P51571 AC009041.2-206ENST00000563863 1728 ntTSL 2 BASIC16.47■□□□□ 0.23
SSR4P51571 ZNF74-203ENST00000403682 2789 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
SSR4P51571 SLC35F5-201ENST00000245680 4412 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
SSR4P51571 CD82-201ENST00000227155 2289 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
SSR4P51571 CSK-202ENST00000439220 1900 ntAPPRIS P1 TSL 2 BASIC16.47■□□□□ 0.23
SSR4P51571 HSPB9-201ENST00000565659 1922 ntAPPRIS P1 BASIC16.47■□□□□ 0.23
SSR4P51571 EDN3-204ENST00000371028 2397 ntAPPRIS P4 TSL 5 BASIC16.46■□□□□ 0.23
SSR4P51571 TAB2-209ENST00000637181 4230 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
SSR4P51571 OTUD1-201ENST00000376495 2933 ntAPPRIS P1 BASIC16.46■□□□□ 0.23
SSR4P51571 ACADVL-205ENST00000543245 2227 ntTSL 2 BASIC16.46■□□□□ 0.23
SSR4P51571 MAGI3-201ENST00000307546 6430 ntTSL 5 BASIC16.46■□□□□ 0.23
SSR4P51571 AC016757.1-205ENST00000470346 1888 ntTSL 2 BASIC16.46■□□□□ 0.23
SSR4P51571 MGLL-204ENST00000434178 4941 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
SSR4P51571 DUOXA1-201ENST00000267803 1996 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
SSR4P51571 SH3BP1-201ENST00000357436 2852 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
SSR4P51571 OTOP2-202ENST00000580223 2086 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
SSR4P51571 FAM72C-202ENST00000584486 2297 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
SSR4P51571 RCN1P2-201ENST00000398357 915 ntBASIC16.46■□□□□ 0.23
SSR4P51571 C7orf34-201ENST00000409607 766 ntAPPRIS P2 TSL 1 (best) BASIC16.46■□□□□ 0.23
SSR4P51571 TMEM213-202ENST00000413208 480 ntAPPRIS ALT2 TSL 3 BASIC16.46■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 21.6 ms