Protein–RNA interactions for Protein: P49427

CDC34, Ubiquitin-conjugating enzyme E2 R1, humanhuman

Predicted RBP Predictions only

Length 236 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC34P49427 OLFM1-206ENST00000371799 961 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
CDC34P49427 PLAC9-202ENST00000372267 472 ntAPPRIS ALT2 TSL 3 BASIC14.25□□□□□ -0.13
CDC34P49427 AL359182.2-201ENST00000457720 606 ntTSL 3 BASIC14.25□□□□□ -0.13
CDC34P49427 LINC00336-201ENST00000477984 2107 ntTSL 2 BASIC14.25□□□□□ -0.13
CDC34P49427 F2R-202ENST00000505600 442 ntTSL 2 BASIC14.25□□□□□ -0.13
CDC34P49427 AC006504.5-207ENST00000586220 487 ntTSL 2 BASIC14.25□□□□□ -0.13
CDC34P49427 NEDD4L-225ENST00000589054 1033 ntTSL 3 BASIC14.25□□□□□ -0.13
CDC34P49427 AL032819.3-201ENST00000640283 925 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
CDC34P49427 CCDC187-205ENST00000638797 10126 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
CDC34P49427 CHRNA7-207ENST00000635884 1975 ntTSL 5 BASIC14.25□□□□□ -0.13
CDC34P49427 MLLT10-203ENST00000377072 5126 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
CDC34P49427 IQSEC3-203ENST00000538872 7094 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
CDC34P49427 FAM109A-204ENST00000548163 2317 ntAPPRIS P3 TSL 2 BASIC14.25□□□□□ -0.13
CDC34P49427 AHDC1-202ENST00000374011 6438 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
CDC34P49427 ABLIM2-203ENST00000361737 3396 ntAPPRIS ALT2 TSL 2 BASIC14.25□□□□□ -0.13
CDC34P49427 SLC10A3-204ENST00000393587 1862 ntAPPRIS P3 TSL 2 BASIC14.25□□□□□ -0.13
CDC34P49427 LBX2-AS1-201ENST00000548978 1852 ntTSL 3 BASIC14.25□□□□□ -0.13
CDC34P49427 ADRB3-201ENST00000345060 2950 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
CDC34P49427 ARMC5-203ENST00000457010 4844 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
CDC34P49427 LINC02361-201ENST00000538731 1484 ntTSL 2 BASIC14.25□□□□□ -0.13
CDC34P49427 TTBK1-201ENST00000259750 6932 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
CDC34P49427 USP27X-AS1-201ENST00000437322 2175 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
CDC34P49427 NAA60-201ENST00000360862 2522 ntTSL 2 BASIC14.24□□□□□ -0.13
CDC34P49427 CPZ-203ENST00000382480 2538 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
CDC34P49427 DUS3L-201ENST00000309061 2113 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
CDC34P49427 RAD23A-201ENST00000316856 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC14.24□□□□□ -0.13
CDC34P49427 CD40-202ENST00000372285 1729 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
CDC34P49427 ZSCAN10-202ENST00000538082 2350 ntTSL 4 BASIC14.24□□□□□ -0.13
CDC34P49427 SHROOM2-201ENST00000380913 7447 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
CDC34P49427 ACBD4-215ENST00000592162 1684 ntTSL 5 BASIC14.24□□□□□ -0.13
CDC34P49427 FAM57B-202ENST00000380495 2313 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
CDC34P49427 BNC1-201ENST00000345382 4610 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
CDC34P49427 IRF3-203ENST00000377139 1613 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
CDC34P49427 ITGB2-AS1-202ENST00000441379 2282 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
CDC34P49427 AC112229.1-202ENST00000490013 2918 ntTSL 2 BASIC14.24□□□□□ -0.13
CDC34P49427 NRXN2-202ENST00000301894 3535 ntTSL 5 BASIC14.24□□□□□ -0.13
CDC34P49427 PSPN-201ENST00000245810 471 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
CDC34P49427 PMEPA1-204ENST00000395814 800 ntTSL 3 BASIC14.24□□□□□ -0.13
CDC34P49427 PTPA-216ENST00000432651 857 ntTSL 2 BASIC14.24□□□□□ -0.13
CDC34P49427 A3GALT2-201ENST00000442999 1023 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
CDC34P49427 AC068831.2-201ENST00000448987 367 ntTSL 2 BASIC14.24□□□□□ -0.13
CDC34P49427 RHEB-204ENST00000472642 900 ntTSL 3 BASIC14.24□□□□□ -0.13
CDC34P49427 AC097658.1-201ENST00000475555 843 ntBASIC14.24□□□□□ -0.13
CDC34P49427 EPHA5-AS1-202ENST00000509473 1177 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
CDC34P49427 TESMIN-209ENST00000544963 1235 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
CDC34P49427 OAS3-207ENST00000551007 998 ntTSL 2 BASIC14.24□□□□□ -0.13
CDC34P49427 ELAC1-203ENST00000588577 694 ntTSL 2 BASIC14.24□□□□□ -0.13
CDC34P49427 PSME3-210ENST00000590720 998 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
CDC34P49427 CBX1-201ENST00000225603 2232 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
CDC34P49427 SH3BP4-201ENST00000344528 5044 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
CDC34P49427 MELTF-201ENST00000296350 3963 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
CDC34P49427 TSSK2-201ENST00000399635 1816 ntAPPRIS P1 BASIC14.24□□□□□ -0.13
CDC34P49427 ZBP1-202ENST00000395822 2073 ntTSL 2 BASIC14.24□□□□□ -0.13
CDC34P49427 AMDHD2-201ENST00000293971 1459 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
CDC34P49427 A4GALT-203ENST00000401850 2321 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
CDC34P49427 H6PD-201ENST00000377403 9146 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
CDC34P49427 PURB-201ENST00000395699 9069 ntAPPRIS P1 BASIC14.24□□□□□ -0.13
CDC34P49427 JKAMP-202ENST00000356057 2524 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
CDC34P49427 FAM174B-201ENST00000327355 2792 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
CDC34P49427 SP100-208ENST00000427101 1922 ntTSL 2 BASIC14.23□□□□□ -0.13
CDC34P49427 CCDC127-201ENST00000296824 9342 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
CDC34P49427 BOC-212ENST00000485230 2173 ntTSL 2 BASIC14.23□□□□□ -0.13
CDC34P49427 AC093010.1-201ENST00000473625 1624 ntBASIC14.23□□□□□ -0.13
CDC34P49427 SFXN1-201ENST00000321442 4231 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
CDC34P49427 NEK10-202ENST00000341435 2638 ntTSL 2 BASIC14.23□□□□□ -0.13
CDC34P49427 SUFU-201ENST00000369899 1839 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
CDC34P49427 STOML1-209ENST00000564777 1849 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
CDC34P49427 ABHD14B-206ENST00000483233 2056 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
CDC34P49427 RECQL4-210ENST00000621189 3896 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
CDC34P49427 MIR663A-201ENST00000385250 93 ntBASIC14.23□□□□□ -0.13
CDC34P49427 Z98884.1-201ENST00000451646 830 ntTSL 3 BASIC14.23□□□□□ -0.13
CDC34P49427 DHRS4-206ENST00000558581 1143 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
CDC34P49427 SNAP23-210ENST00000564153 775 ntTSL 2 BASIC14.23□□□□□ -0.13
CDC34P49427 PDCD5-204ENST00000586035 601 ntTSL 3 BASIC14.23□□□□□ -0.13
CDC34P49427 KLF2-202ENST00000592003 564 ntTSL 3 BASIC14.23□□□□□ -0.13
CDC34P49427 AC013268.1-201ENST00000639717 1208 ntTSL 5 BASIC14.23□□□□□ -0.13
CDC34P49427 DNAJC8-201ENST00000263697 1759 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
CDC34P49427 CYHR1-204ENST00000438911 2020 ntAPPRIS P1 TSL 2 BASIC14.23□□□□□ -0.13
CDC34P49427 ANKHD1-EIF4EBP3-203ENST00000532219 8246 ntAPPRIS P1 TSL 2 BASIC14.23□□□□□ -0.13
CDC34P49427 MFSD4B-201ENST00000368847 5958 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
CDC34P49427 HSPA1A-201ENST00000375651 2483 ntAPPRIS P1 BASIC14.23□□□□□ -0.13
CDC34P49427 ZBTB22-207ENST00000418724 2645 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
CDC34P49427 TBC1D2-205ENST00000465784 3349 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
CDC34P49427 AP2A2-201ENST00000332231 4656 ntAPPRIS ALT1 TSL 1 (best) BASIC14.23□□□□□ -0.13
CDC34P49427 PGBD5-201ENST00000391860 10961 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
CDC34P49427 CISD2-201ENST00000273986 2327 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
CDC34P49427 CROCCP2-202ENST00000412962 2773 ntBASIC14.22□□□□□ -0.13
CDC34P49427 MYLK2-202ENST00000375994 2956 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
CDC34P49427 TNXB-209ENST00000613214 6842 ntTSL 5 BASIC14.22□□□□□ -0.13
CDC34P49427 FAM9B-202ENST00000362066 2047 ntTSL 2 BASIC14.22□□□□□ -0.13
CDC34P49427 OSBP2-202ENST00000401475 2468 ntTSL 2 BASIC14.22□□□□□ -0.13
CDC34P49427 WDR59-202ENST00000536050 1752 ntTSL 2 BASIC14.22□□□□□ -0.13
CDC34P49427 QTRT1-201ENST00000250237 1317 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
CDC34P49427 KCNJ2-AS1-201ENST00000590966 2442 ntBASIC14.22□□□□□ -0.13
CDC34P49427 TMEM175-222ENST00000622959 1967 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
CDC34P49427 ZFYVE28-208ENST00000511071 3273 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
CDC34P49427 RDH10-201ENST00000240285 3949 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
CDC34P49427 EGFL7-204ENST00000406555 1529 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
CDC34P49427 CIRBP-215ENST00000588030 1509 ntAPPRIS P3 TSL 5 BASIC14.22□□□□□ -0.13
CDC34P49427 SH3BP5-206ENST00000426925 2190 ntTSL 2 BASIC14.22□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 40.2 ms