Protein–RNA interactions for Protein: P48664

SLC1A6, Excitatory amino acid transporter 4, humanhuman

Predictions only

Length 564 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC1A6P48664 DLC1-203ENST00000358919 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
SLC1A6P48664 PDE9A-206ENST00000380328 1875 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
SLC1A6P48664 BLCAP-201ENST00000373537 2073 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
SLC1A6P48664 TBX6-203ENST00000553607 2162 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
SLC1A6P48664 TMEM130-202ENST00000345589 2261 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
SLC1A6P48664 OSBP2-202ENST00000401475 2468 ntTSL 2 BASIC17.73■□□□□ 0.43
SLC1A6P48664 KCNT1-202ENST00000371757 4717 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
SLC1A6P48664 EXD3-201ENST00000340951 2872 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
SLC1A6P48664 FERMT2-203ENST00000395631 3369 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
SLC1A6P48664 SRI-203ENST00000419179 1307 ntTSL 2 BASIC17.72■□□□□ 0.43
SLC1A6P48664 TBC1D20-201ENST00000354200 4466 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
SLC1A6P48664 AGER-205ENST00000375069 1538 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
SLC1A6P48664 FAM111A-204ENST00000528737 6189 ntAPPRIS P1 TSL 2 BASIC17.72■□□□□ 0.43
SLC1A6P48664 CBX1-201ENST00000225603 2232 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
SLC1A6P48664 CPT2-210ENST00000637252 2739 ntTSL 5 BASIC17.72■□□□□ 0.43
SLC1A6P48664 PTPN18-201ENST00000175756 3669 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
SLC1A6P48664 RNF103-201ENST00000237455 3477 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
SLC1A6P48664 DNAJA3-202ENST00000355296 2591 ntAPPRIS ALT1 TSL 1 (best) BASIC17.72■□□□□ 0.43
SLC1A6P48664 FTSJ1-201ENST00000019019 1986 ntAPPRIS ALT1 TSL 2 BASIC17.72■□□□□ 0.43
SLC1A6P48664 ZIC3-202ENST00000370606 1968 ntTSL 5 BASIC17.72■□□□□ 0.43
SLC1A6P48664 TSPAN4-209ENST00000409543 1031 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
SLC1A6P48664 AC007405.3-201ENST00000429172 561 ntTSL 3 BASIC17.72■□□□□ 0.43
SLC1A6P48664 AC103855.2-201ENST00000533315 573 ntTSL 4 BASIC17.72■□□□□ 0.43
SLC1A6P48664 TMEM72-203ENST00000544540 1018 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
SLC1A6P48664 AC009065.1-201ENST00000564055 1225 ntBASIC17.72■□□□□ 0.43
SLC1A6P48664 AC004706.3-201ENST00000634558 1009 ntTSL 5 BASIC17.72■□□□□ 0.43
SLC1A6P48664 C12orf56-207ENST00000543942 3242 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
SLC1A6P48664 KCNJ2-AS1-201ENST00000590966 2442 ntBASIC17.72■□□□□ 0.43
SLC1A6P48664 IL4I1-204ENST00000595948 2407 ntAPPRIS P4 TSL 1 (best) BASIC17.72■□□□□ 0.43
SLC1A6P48664 FO681492.1-201ENST00000623662 5321 ntAPPRIS P5 TSL 2 BASIC17.72■□□□□ 0.43
SLC1A6P48664 ERI1-203ENST00000519292 2107 ntAPPRIS P1 TSL 2 BASIC17.72■□□□□ 0.43
SLC1A6P48664 ZNF296-201ENST00000303809 1744 ntAPPRIS P2 TSL 1 (best) BASIC17.72■□□□□ 0.43
SLC1A6P48664 MYO1B-204ENST00000392318 5082 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
SLC1A6P48664 AL121761.2-201ENST00000598007 1648 ntBASIC17.72■□□□□ 0.43
SLC1A6P48664 PNKP-224ENST00000631020 1545 ntTSL 5 BASIC17.72■□□□□ 0.43
SLC1A6P48664 PEX14-201ENST00000356607 1985 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
SLC1A6P48664 CPZ-203ENST00000382480 2538 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
SLC1A6P48664 EWSR1-222ENST00000629659 2446 ntTSL 5 BASIC17.71■□□□□ 0.43
SLC1A6P48664 AL731569.1-201ENST00000428940 3058 ntTSL 2 BASIC17.71■□□□□ 0.43
SLC1A6P48664 VRK3-225ENST00000601912 1668 ntAPPRIS ALT2 TSL 5 BASIC17.71■□□□□ 0.43
SLC1A6P48664 CCDC184-201ENST00000316554 2343 ntAPPRIS P1 BASIC17.71■□□□□ 0.43
SLC1A6P48664 PITPNA-202ENST00000539476 3612 ntAPPRIS ALT1 TSL 5 BASIC17.71■□□□□ 0.43
SLC1A6P48664 TLK2-201ENST00000326270 3512 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
SLC1A6P48664 HPCA-201ENST00000373467 1468 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
SLC1A6P48664 ZIC4-209ENST00000473123 1481 ntAPPRIS P1 TSL 2 BASIC17.71■□□□□ 0.43
SLC1A6P48664 DAPK2-205ENST00000558069 1473 ntTSL 5 BASIC17.71■□□□□ 0.43
SLC1A6P48664 RNF112-201ENST00000461366 3212 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
SLC1A6P48664 RBPJL-201ENST00000343694 2489 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
SLC1A6P48664 GPS2-201ENST00000380728 1379 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
SLC1A6P48664 CGB7-202ENST00000596965 1949 ntAPPRIS P1 TSL 2 BASIC17.71■□□□□ 0.43
SLC1A6P48664 AC116562.2-201ENST00000507042 360 ntBASIC17.71■□□□□ 0.43
SLC1A6P48664 MOK-228ENST00000523231 1114 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
SLC1A6P48664 CYGB-204ENST00000589342 815 ntTSL 3 BASIC17.71■□□□□ 0.43
SLC1A6P48664 TRAPPC5-203ENST00000595985 411 ntTSL 3 BASIC17.71■□□□□ 0.43
SLC1A6P48664 CD177P1-201ENST00000606252 935 ntBASIC17.71■□□□□ 0.43
SLC1A6P48664 AC097662.2-201ENST00000641359 267 ntAPPRIS P1 BASIC17.71■□□□□ 0.43
SLC1A6P48664 ZBTB45-202ENST00000594051 2541 ntAPPRIS P1 TSL 2 BASIC17.71■□□□□ 0.43
SLC1A6P48664 CHRNA7-207ENST00000635884 1975 ntTSL 5 BASIC17.71■□□□□ 0.43
SLC1A6P48664 TNRC18P3-201ENST00000441896 2691 ntBASIC17.71■□□□□ 0.43
SLC1A6P48664 BRPF1-201ENST00000383829 4736 ntAPPRIS ALT1 TSL 1 (best) BASIC17.71■□□□□ 0.43
SLC1A6P48664 ELN-207ENST00000380562 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
SLC1A6P48664 SENP5-201ENST00000323460 6308 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
SLC1A6P48664 NFS1-202ENST00000374085 2645 ntTSL 2 BASIC17.7■□□□□ 0.42
SLC1A6P48664 HOXA2-201ENST00000222718 1814 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
SLC1A6P48664 P2RX6-201ENST00000401443 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
SLC1A6P48664 PCBP4-203ENST00000428823 1835 ntTSL 5 BASIC17.7■□□□□ 0.42
SLC1A6P48664 SLC39A13-213ENST00000533076 1805 ntTSL 2 BASIC17.7■□□□□ 0.42
SLC1A6P48664 CLEC18B-206ENST00000620745 1847 ntTSL 5 BASIC17.7■□□□□ 0.42
SLC1A6P48664 ACD-215ENST00000620761 1483 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
SLC1A6P48664 RIN1-201ENST00000311320 2693 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
SLC1A6P48664 ADGRB2-202ENST00000373658 5414 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
SLC1A6P48664 TMEM216-203ENST00000515837 1958 ntAPPRIS P2 TSL 2 BASIC17.7■□□□□ 0.42
SLC1A6P48664 KDM6A-213ENST00000611820 5924 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
SLC1A6P48664 MYB-205ENST00000367814 3302 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
SLC1A6P48664 ATP1B1-201ENST00000367815 1883 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
SLC1A6P48664 BSX-201ENST00000343035 830 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
SLC1A6P48664 CDKN1B-202ENST00000396340 897 ntTSL 3 BASIC17.7■□□□□ 0.42
SLC1A6P48664 AL590666.2-201ENST00000448869 758 ntTSL 2 BASIC17.7■□□□□ 0.42
SLC1A6P48664 UBE2K-204ENST00000503368 891 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
SLC1A6P48664 PTTG1-205ENST00000520452 895 ntAPPRIS P1 TSL 3 BASIC17.7■□□□□ 0.42
SLC1A6P48664 AC027796.4-201ENST00000575741 874 ntTSL 5 BASIC17.7■□□□□ 0.42
SLC1A6P48664 CIRBP-217ENST00000588230 1013 ntTSL 5 BASIC17.7■□□□□ 0.42
SLC1A6P48664 KANK3-205ENST00000610351 1191 ntTSL 5 BASIC17.7■□□□□ 0.42
SLC1A6P48664 AC092666.2-201ENST00000613287 246 ntBASIC17.7■□□□□ 0.42
SLC1A6P48664 PCDHA7-202ENST00000525929 5221 ntAPPRIS P2 TSL 1 (best) BASIC17.7■□□□□ 0.42
SLC1A6P48664 ITGB2-AS1-202ENST00000441379 2282 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
SLC1A6P48664 GNAI2-204ENST00000440628 1663 ntTSL 5 BASIC17.7■□□□□ 0.42
SLC1A6P48664 CACNA1A-201ENST00000360228 8627 ntAPPRIS P4 TSL 1 (best) BASIC17.7■□□□□ 0.42
SLC1A6P48664 RECK-201ENST00000377966 4888 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
SLC1A6P48664 PRSS36-207ENST00000569305 2723 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
SLC1A6P48664 ZBTB4-202ENST00000380599 5866 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
SLC1A6P48664 EPB41L3-207ENST00000545076 3190 ntAPPRIS ALT2 TSL 2 BASIC17.69■□□□□ 0.42
SLC1A6P48664 SRF-201ENST00000265354 4202 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
SLC1A6P48664 SMARCA4-215ENST00000590574 5282 ntAPPRIS ALT1 TSL 5 BASIC17.69■□□□□ 0.42
SLC1A6P48664 C11orf58-201ENST00000228136 2049 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
SLC1A6P48664 ZIC4-212ENST00000484399 1774 ntAPPRIS P1 TSL 2 BASIC17.69■□□□□ 0.42
SLC1A6P48664 DDX28-201ENST00000332395 2169 ntAPPRIS P1 BASIC17.69■□□□□ 0.42
SLC1A6P48664 PTP4A1-201ENST00000370651 5088 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
SLC1A6P48664 SHTN1-203ENST00000392901 2190 ntAPPRIS ALT2 TSL 2 BASIC17.69■□□□□ 0.42
SLC1A6P48664 RABL2A-204ENST00000393167 2179 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 33.3 ms