Protein–RNA interactions for Protein: P48431

SOX2, Transcription factor SOX-2, humanhuman

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2P48431 RTN4-207ENST00000402434 1456 ntTSL 5 BASIC15.87■□□□□ 0.13
SOX2P48431 CISD2-201ENST00000273986 2327 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
SOX2P48431 S100A14-203ENST00000368701 1080 ntAPPRIS P1 TSL 2 BASIC15.87■□□□□ 0.13
SOX2P48431 F8A2-201ENST00000369505 1116 ntAPPRIS P1 BASIC15.87■□□□□ 0.13
SOX2P48431 NPM3-201ENST00000370110 877 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
SOX2P48431 SYCE1L-201ENST00000378644 858 ntAPPRIS P2 TSL 5 BASIC15.87■□□□□ 0.13
SOX2P48431 DMRT2-206ENST00000412350 1244 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
SOX2P48431 SAPCD2P4-201ENST00000424595 1171 ntBASIC15.87■□□□□ 0.13
SOX2P48431 USP46-AS1-201ENST00000503051 1048 ntTSL 3 BASIC15.87■□□□□ 0.13
SOX2P48431 RNF121-214ENST00000533380 870 ntTSL 3 BASIC15.87■□□□□ 0.13
SOX2P48431 AC117500.4-201ENST00000542797 617 ntTSL 3 BASIC15.87■□□□□ 0.13
SOX2P48431 MIR4674-201ENST00000582457 87 ntBASIC15.87■□□□□ 0.13
SOX2P48431 AC091551.1-201ENST00000590722 1228 ntAPPRIS P1 TSL 2 BASIC15.87■□□□□ 0.13
SOX2P48431 FAM197Y4-202ENST00000622692 608 ntBASIC15.87■□□□□ 0.13
SOX2P48431 AC004706.3-201ENST00000634558 1009 ntTSL 5 BASIC15.87■□□□□ 0.13
SOX2P48431 RASA4-202ENST00000449970 2787 ntAPPRIS ALT1 TSL 2 BASIC15.87■□□□□ 0.13
SOX2P48431 MAP4K3-202ENST00000341681 4271 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
SOX2P48431 CD40-202ENST00000372285 1729 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
SOX2P48431 ITGAV-202ENST00000374907 6903 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
SOX2P48431 VASN-201ENST00000304735 2806 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
SOX2P48431 C18orf8-201ENST00000269221 2162 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
SOX2P48431 BMP3-201ENST00000282701 5734 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
SOX2P48431 HARS-201ENST00000307633 1780 ntTSL 2 BASIC15.87■□□□□ 0.13
SOX2P48431 MUM1-216ENST00000627377 2235 ntAPPRIS ALT2 TSL 5 BASIC15.87■□□□□ 0.13
SOX2P48431 PDE2A-226ENST00000544570 3119 ntTSL 5 BASIC15.87■□□□□ 0.13
SOX2P48431 SAYSD1-201ENST00000229903 2020 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
SOX2P48431 DLK2-203ENST00000372488 1590 ntAPPRIS P3 TSL 1 (best) BASIC15.87■□□□□ 0.13
SOX2P48431 PHKG2-202ENST00000424889 1566 ntTSL 2 BASIC15.87■□□□□ 0.13
SOX2P48431 AC079922.2-201ENST00000457336 2022 ntTSL 2 BASIC15.87■□□□□ 0.13
SOX2P48431 TXNRD2-218ENST00000542719 2024 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
SOX2P48431 NFATC4-231ENST00000557451 5613 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
SOX2P48431 RGL3-202ENST00000393423 2278 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
SOX2P48431 ACVRL1-202ENST00000419526 1356 ntTSL 2 BASIC15.87■□□□□ 0.13
SOX2P48431 ZNF264-202ENST00000536056 2078 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
SOX2P48431 ANKRD24-202ENST00000318934 3906 ntAPPRIS P2 TSL 5 BASIC15.87■□□□□ 0.13
SOX2P48431 GGT5-201ENST00000263112 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
SOX2P48431 DPP6-202ENST00000377770 3710 ntAPPRIS P4 TSL 1 (best) BASIC15.86■□□□□ 0.13
SOX2P48431 ABCC3-202ENST00000427699 1881 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
SOX2P48431 TMEM234-203ENST00000373593 1411 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
SOX2P48431 ZNF211-211ENST00000541801 2629 ntAPPRIS ALT2 TSL 3 BASIC15.86■□□□□ 0.13
SOX2P48431 ARSA-204ENST00000395621 1918 ntAPPRIS P1 TSL 2 BASIC15.86■□□□□ 0.13
SOX2P48431 SLAIN2-201ENST00000264313 6299 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
SOX2P48431 LPAR5-202ENST00000431922 2695 ntAPPRIS P1 TSL 2 BASIC15.86■□□□□ 0.13
SOX2P48431 PLD3-205ENST00000409419 1966 ntAPPRIS P1 TSL 5 BASIC15.86■□□□□ 0.13
SOX2P48431 HIC2-201ENST00000407464 6798 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
SOX2P48431 SEMA3B-204ENST00000433753 2755 ntAPPRIS ALT1 TSL 1 (best) BASIC15.86■□□□□ 0.13
SOX2P48431 HOOK2-202ENST00000397668 2513 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
SOX2P48431 AL512380.2-201ENST00000637901 1780 ntTSL 5 BASIC15.86■□□□□ 0.13
SOX2P48431 FAM208B-201ENST00000328090 8626 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
SOX2P48431 C12orf42-205ENST00000548048 1532 ntAPPRIS ALT2 TSL 5 BASIC15.86■□□□□ 0.13
SOX2P48431 TIMM17B-201ENST00000376582 950 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
SOX2P48431 SEC61A2-206ENST00000379051 707 ntTSL 3 BASIC15.86■□□□□ 0.13
SOX2P48431 TSPAN4-209ENST00000409543 1031 ntAPPRIS P1 TSL 5 BASIC15.86■□□□□ 0.13
SOX2P48431 CYGB-204ENST00000589342 815 ntTSL 3 BASIC15.86■□□□□ 0.13
SOX2P48431 PSMC3IP-208ENST00000590760 664 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
SOX2P48431 RABAC1-210ENST00000601891 628 ntTSL 3 BASIC15.86■□□□□ 0.13
SOX2P48431 AC010531.6-201ENST00000602282 401 ntTSL 2 BASIC15.86■□□□□ 0.13
SOX2P48431 CD177P1-201ENST00000606252 935 ntBASIC15.86■□□□□ 0.13
SOX2P48431 SBNO2-204ENST00000587024 4861 ntAPPRIS ALT2 TSL 2 BASIC15.86■□□□□ 0.13
SOX2P48431 IGSF8-201ENST00000314485 2343 ntAPPRIS P2 TSL 1 (best) BASIC15.86■□□□□ 0.13
SOX2P48431 RHOT1-201ENST00000333942 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC15.86■□□□□ 0.13
SOX2P48431 CYP2W1-202ENST00000340150 2361 ntTSL 2 BASIC15.86■□□□□ 0.13
SOX2P48431 AGBL5-202ENST00000360131 3177 ntAPPRIS P3 TSL 1 (best) BASIC15.86■□□□□ 0.13
SOX2P48431 KCNMA1-261ENST00000639486 8850 ntAPPRIS ALT2 TSL 5 BASIC15.86■□□□□ 0.13
SOX2P48431 SIGIRR-220ENST00000531205 1649 ntTSL 2 BASIC15.86■□□□□ 0.13
SOX2P48431 LINC01126-201ENST00000623515 1646 ntBASIC15.86■□□□□ 0.13
SOX2P48431 LAMC1-201ENST00000258341 7889 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
SOX2P48431 PPP1R3G-201ENST00000405617 4907 ntAPPRIS P1 BASIC15.86■□□□□ 0.13
SOX2P48431 GHDC-202ENST00000414034 2496 ntTSL 2 BASIC15.86■□□□□ 0.13
SOX2P48431 DBX1-201ENST00000524983 1380 ntAPPRIS P1 TSL 5 BASIC15.86■□□□□ 0.13
SOX2P48431 NPTN-202ENST00000351217 2817 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
SOX2P48431 SPATA6L-207ENST00000475086 1444 ntAPPRIS P1 TSL 2 BASIC15.85■□□□□ 0.13
SOX2P48431 SLC2A5-201ENST00000377414 2344 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
SOX2P48431 TAF1C-222ENST00000570117 2349 ntAPPRIS ALT2 TSL 2 BASIC15.85■□□□□ 0.13
SOX2P48431 SPAG6-203ENST00000376624 2605 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
SOX2P48431 STRN4-204ENST00000539396 2608 ntTSL 2 BASIC15.85■□□□□ 0.13
SOX2P48431 PPP4R3A-208ENST00000555462 3236 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
SOX2P48431 C14orf180-201ENST00000331952 1455 ntAPPRIS ALT2 TSL 2 BASIC15.85■□□□□ 0.13
SOX2P48431 ZIC4-209ENST00000473123 1481 ntAPPRIS P1 TSL 2 BASIC15.85■□□□□ 0.13
SOX2P48431 AGAP6-201ENST00000374056 2703 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
SOX2P48431 RBCK1-202ENST00000356286 2774 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
SOX2P48431 FIBCD1-201ENST00000372337 1868 ntTSL 5 BASIC15.85■□□□□ 0.13
SOX2P48431 MID1IP1-202ENST00000378474 1889 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
SOX2P48431 SLC29A2-206ENST00000546034 2509 ntAPPRIS P1 TSL 5 BASIC15.85■□□□□ 0.13
SOX2P48431 PCGF6-202ENST00000369847 2230 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
SOX2P48431 TMEM240-201ENST00000378733 718 ntAPPRIS P1 TSL 2 BASIC15.85■□□□□ 0.13
SOX2P48431 TRPT1-203ENST00000394547 865 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
SOX2P48431 KRT18P23-201ENST00000435622 1283 ntBASIC15.85■□□□□ 0.13
SOX2P48431 AC097488.1-201ENST00000507834 756 ntBASIC15.85■□□□□ 0.13
SOX2P48431 PTTG1-205ENST00000520452 895 ntAPPRIS P1 TSL 3 BASIC15.85■□□□□ 0.13
SOX2P48431 LINC01301-204ENST00000530725 577 ntTSL 4 BASIC15.85■□□□□ 0.13
SOX2P48431 AC103855.2-201ENST00000533315 573 ntTSL 4 BASIC15.85■□□□□ 0.13
SOX2P48431 AC015712.2-203ENST00000560461 688 ntTSL 3 BASIC15.85■□□□□ 0.13
SOX2P48431 SPIB-206ENST00000596074 847 ntTSL 2 BASIC15.85■□□□□ 0.13
SOX2P48431 MMD2-204ENST00000612910 778 ntTSL 5 BASIC15.85■□□□□ 0.13
SOX2P48431 KLHDC3-201ENST00000244670 1903 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
SOX2P48431 AC104809.2-201ENST00000418218 2274 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
SOX2P48431 PIP5K1A-207ENST00000441902 2297 ntTSL 2 BASIC15.85■□□□□ 0.13
SOX2P48431 DNM3-203ENST00000367733 2322 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
SOX2P48431 YKT6-201ENST00000223369 2696 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 39.2 ms