Protein–RNA interactions for Protein: P48065

SLC6A12, Sodium- and chloride-dependent betaine transporter, humanhuman

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A12P48065 MAGEA6-201ENST00000329342 1740 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
SLC6A12P48065 PSRC1-204ENST00000369909 1742 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
SLC6A12P48065 MAGEA3-201ENST00000370278 1724 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
SLC6A12P48065 SAMD11-214ENST00000618323 2159 ntTSL 5 BASIC17.37■□□□□ 0.37
SLC6A12P48065 DDX42-202ENST00000389924 3939 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
SLC6A12P48065 ANKRD6-201ENST00000339746 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC17.37■□□□□ 0.37
SLC6A12P48065 CACNB3-202ENST00000536187 1872 ntTSL 2 BASIC17.37■□□□□ 0.37
SLC6A12P48065 SPSB3-201ENST00000301717 1449 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
SLC6A12P48065 MAP2K5-202ENST00000340972 1491 ntTSL 2 BASIC17.37■□□□□ 0.37
SLC6A12P48065 MBD3-201ENST00000156825 5518 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
SLC6A12P48065 EML3-217ENST00000531557 2509 ntTSL 5 BASIC17.37■□□□□ 0.37
SLC6A12P48065 CTSB-204ENST00000453527 2011 ntAPPRIS P1 TSL 2 BASIC17.37■□□□□ 0.37
SLC6A12P48065 EMX1-202ENST00000394111 1528 ntTSL 3 BASIC17.37■□□□□ 0.37
SLC6A12P48065 FAM83H-201ENST00000388913 5654 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
SLC6A12P48065 TMEM222-201ENST00000374076 1599 ntAPPRIS P2 TSL 1 (best) BASIC17.36■□□□□ 0.37
SLC6A12P48065 ROR1-201ENST00000371079 5832 ntAPPRIS P2 TSL 1 (best) BASIC17.36■□□□□ 0.37
SLC6A12P48065 FKBP10-201ENST00000321562 2662 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
SLC6A12P48065 C3orf70-201ENST00000335012 5901 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
SLC6A12P48065 ZNF419-204ENST00000415379 2186 ntAPPRIS ALT2 TSL 2 BASIC17.36■□□□□ 0.37
SLC6A12P48065 NCOA6-207ENST00000616167 3271 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
SLC6A12P48065 CMIP-209ENST00000566513 2288 ntTSL 5 BASIC17.36■□□□□ 0.37
SLC6A12P48065 SLCO6A1-202ENST00000389019 2340 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
SLC6A12P48065 ZCWPW1-202ENST00000398027 2356 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
SLC6A12P48065 PMEPA1-202ENST00000341744 4845 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
SLC6A12P48065 RNF166-203ENST00000541206 2419 ntTSL 2 BASIC17.36■□□□□ 0.37
SLC6A12P48065 NUDT8-201ENST00000301490 809 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
SLC6A12P48065 SUV39H2-204ENST00000378325 1292 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
SLC6A12P48065 AC004540.1-203ENST00000421862 907 ntTSL 5 BASIC17.36■□□□□ 0.37
SLC6A12P48065 HAGLR-204ENST00000425005 623 ntTSL 3 BASIC17.36■□□□□ 0.37
SLC6A12P48065 AP001625.2-201ENST00000442605 575 ntTSL 2 BASIC17.36■□□□□ 0.37
SLC6A12P48065 AC112698.1-201ENST00000510299 916 ntBASIC17.36■□□□□ 0.37
SLC6A12P48065 MYL6-209ENST00000548293 753 ntAPPRIS P3 TSL 2 BASIC17.36■□□□□ 0.37
SLC6A12P48065 EIF2AK4-209ENST00000560648 687 ntTSL 3 BASIC17.36■□□□□ 0.37
SLC6A12P48065 CLN6-204ENST00000564752 900 ntTSL 3 BASIC17.36■□□□□ 0.37
SLC6A12P48065 CLN6-214ENST00000636314 442 ntTSL 3 BASIC17.36■□□□□ 0.37
SLC6A12P48065 ANKRD20A8P-203ENST00000641373 517 ntBASIC17.36■□□□□ 0.37
SLC6A12P48065 ETS1-208ENST00000535549 4594 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
SLC6A12P48065 SERPINB6-208ENST00000616722 2047 ntTSL 2 BASIC17.36■□□□□ 0.37
SLC6A12P48065 CDK2AP2-201ENST00000301488 1378 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
SLC6A12P48065 IFNAR2-204ENST00000382264 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
SLC6A12P48065 CCDC74B-202ENST00000392984 1353 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
SLC6A12P48065 MARK2-207ENST00000502399 2885 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
SLC6A12P48065 NOS1AP-206ENST00000530878 2894 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
SLC6A12P48065 AQP5-201ENST00000293599 1450 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
SLC6A12P48065 CCDC137-201ENST00000329214 2468 ntAPPRIS P2 TSL 1 (best) BASIC17.36■□□□□ 0.37
SLC6A12P48065 MAP6-201ENST00000304771 3334 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
SLC6A12P48065 STAMBPL1-203ENST00000371926 2532 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
SLC6A12P48065 RCAN3-209ENST00000616511 2527 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
SLC6A12P48065 SIGIRR-203ENST00000431843 1720 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
SLC6A12P48065 PCDHA8-201ENST00000378123 2616 ntAPPRIS ALT2 BASIC17.35■□□□□ 0.37
SLC6A12P48065 ZNF211-211ENST00000541801 2629 ntAPPRIS ALT2 TSL 3 BASIC17.35■□□□□ 0.37
SLC6A12P48065 NECAB1-201ENST00000417640 5289 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
SLC6A12P48065 RPRD1A-201ENST00000357384 1850 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
SLC6A12P48065 ZCCHC23-201ENST00000500526 1951 ntTSL 2 BASIC17.35■□□□□ 0.37
SLC6A12P48065 GRAMD2B-218ENST00000542322 2977 ntTSL 2 BASIC17.35■□□□□ 0.37
SLC6A12P48065 SDHA-213ENST00000510361 2148 ntTSL 2 BASIC17.35■□□□□ 0.37
SLC6A12P48065 FGFR3-202ENST00000340107 4293 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
SLC6A12P48065 C20orf196-201ENST00000303142 1154 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
SLC6A12P48065 NDUFA1-201ENST00000371437 766 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
SLC6A12P48065 VKORC1-205ENST00000394975 1012 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
SLC6A12P48065 KRT18P21-201ENST00000515767 1272 ntBASIC17.35■□□□□ 0.37
SLC6A12P48065 AL449423.1-201ENST00000578935 435 ntTSL 3 BASIC17.35■□□□□ 0.37
SLC6A12P48065 FCGRT-210ENST00000596975 1054 ntTSL 5 BASIC17.35■□□□□ 0.37
SLC6A12P48065 AC116407.2-201ENST00000613639 860 ntBASIC17.35■□□□□ 0.37
SLC6A12P48065 NTMT1-203ENST00000372483 1315 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
SLC6A12P48065 WWC3-201ENST00000380861 6647 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
SLC6A12P48065 AC074389.1-201ENST00000382528 1423 ntTSL 2 BASIC17.35■□□□□ 0.37
SLC6A12P48065 TLE3-226ENST00000627388 5742 ntAPPRIS ALT1 TSL 5 BASIC17.35■□□□□ 0.37
SLC6A12P48065 AC002310.2-202ENST00000492040 1488 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
SLC6A12P48065 IGF2-207ENST00000434045 1583 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
SLC6A12P48065 Z83836.1-201ENST00000624605 1642 ntBASIC17.35■□□□□ 0.37
SLC6A12P48065 LRRC27-214ENST00000625755 1738 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
SLC6A12P48065 PRPF31-202ENST00000391755 1767 ntTSL 5 BASIC17.35■□□□□ 0.37
SLC6A12P48065 ECE2-201ENST00000324557 1823 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
SLC6A12P48065 UBXN6-202ENST00000394765 1809 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
SLC6A12P48065 AC009949.1-201ENST00000623048 1830 ntBASIC17.35■□□□□ 0.37
SLC6A12P48065 HSPB9-201ENST00000565659 1922 ntAPPRIS P1 BASIC17.35■□□□□ 0.37
SLC6A12P48065 ERMARD-210ENST00000588451 2146 ntTSL 5 BASIC17.35■□□□□ 0.37
SLC6A12P48065 NOL4-211ENST00000589544 2221 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
SLC6A12P48065 CCT4-204ENST00000544079 2261 ntTSL 2 BASIC17.35■□□□□ 0.37
SLC6A12P48065 GNE-201ENST00000377902 2565 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
SLC6A12P48065 SPAST-203ENST00000615843 5212 ntAPPRIS P4 TSL 1 (best) BASIC17.34■□□□□ 0.37
SLC6A12P48065 ZXDB-201ENST00000374888 5894 ntAPPRIS P1 BASIC17.34■□□□□ 0.37
SLC6A12P48065 RABAC1-201ENST00000222008 821 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
SLC6A12P48065 RASL11B-201ENST00000248706 1995 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
SLC6A12P48065 BAALC-202ENST00000306391 243 ntTSL 5 BASIC17.34■□□□□ 0.37
SLC6A12P48065 BAALC-204ENST00000330955 222 ntTSL 5 BASIC17.34■□□□□ 0.37
SLC6A12P48065 OARD1-201ENST00000373154 1129 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
SLC6A12P48065 DKK1-201ENST00000373970 1790 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
SLC6A12P48065 ZNF32-201ENST00000374433 1137 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
SLC6A12P48065 UQCC3-201ENST00000377953 1947 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
SLC6A12P48065 B3GALNT1-202ENST00000392779 3221 ntAPPRIS P1 TSL 2 BASIC17.34■□□□□ 0.37
SLC6A12P48065 MIEF2-202ENST00000395703 718 ntTSL 3 BASIC17.34■□□□□ 0.37
SLC6A12P48065 ELP5-204ENST00000396628 1423 ntAPPRIS P2 TSL 1 (best) BASIC17.34■□□□□ 0.37
SLC6A12P48065 LRRC23-209ENST00000443597 1628 ntAPPRIS P4 TSL 1 (best) BASIC17.34■□□□□ 0.37
SLC6A12P48065 AC068472.1-201ENST00000474589 881 ntBASIC17.34■□□□□ 0.37
SLC6A12P48065 AHRR-209ENST00000512529 1912 ntTSL 5 BASIC17.34■□□□□ 0.37
SLC6A12P48065 MAZ-212ENST00000568282 1593 ntTSL 5 BASIC17.34■□□□□ 0.37
SLC6A12P48065 AC011498.3-201ENST00000590159 569 ntTSL 4 BASIC17.34■□□□□ 0.37
SLC6A12P48065 MED29-202ENST00000594368 1471 ntTSL 2 BASIC17.34■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 36.1 ms