Protein–RNA interactions for Protein: P43699

NKX2-1, Homeobox protein Nkx-2.1, humanhuman

Predicted RBP Predictions only

Length 371 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-1P43699 ANAPC11-219ENST00000583839 499 ntAPPRIS P1 TSL 2 BASIC14.77□□□□□ -0.05
NKX2-1P43699 AC003102.1-201ENST00000588279 569 ntTSL 4 BASIC14.77□□□□□ -0.05
NKX2-1P43699 AC083880.1-201ENST00000608266 535 ntBASIC14.77□□□□□ -0.05
NKX2-1P43699 AL160396.2-202ENST00000636692 566 ntAPPRIS ALT2 TSL 5 BASIC14.77□□□□□ -0.05
NKX2-1P43699 QSOX1-201ENST00000367600 2519 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.05
NKX2-1P43699 GALNT9-201ENST00000328957 2410 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
NKX2-1P43699 WDR59-202ENST00000536050 1752 ntTSL 2 BASIC14.77□□□□□ -0.05
NKX2-1P43699 FEM1C-201ENST00000274457 5816 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
NKX2-1P43699 SSB-201ENST00000260956 1709 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
NKX2-1P43699 CYP2D7-201ENST00000358097 1655 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
NKX2-1P43699 ARHGAP4-204ENST00000393721 2721 ntTSL 5 BASIC14.77□□□□□ -0.05
NKX2-1P43699 FBXO7-201ENST00000266087 2195 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
NKX2-1P43699 MIDN-201ENST00000300952 3790 ntAPPRIS P2 TSL 5 BASIC14.77□□□□□ -0.05
NKX2-1P43699 LRFN3-201ENST00000246529 2513 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
NKX2-1P43699 SLC2A6-202ENST00000371899 2528 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
NKX2-1P43699 FOXE1-201ENST00000375123 3462 ntAPPRIS P1 BASIC14.76□□□□□ -0.05
NKX2-1P43699 AP5S1-201ENST00000246041 1960 ntAPPRIS P1 TSL 4 BASIC14.76□□□□□ -0.05
NKX2-1P43699 NUDT17-201ENST00000334513 1473 ntAPPRIS P1 TSL 5 BASIC14.76□□□□□ -0.05
NKX2-1P43699 C19orf66-209ENST00000591813 1481 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
NKX2-1P43699 PABPC1L-201ENST00000217073 1851 ntAPPRIS P1 TSL 5 BASIC14.76□□□□□ -0.05
NKX2-1P43699 MON2-201ENST00000393629 5612 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
NKX2-1P43699 GUCA1A-201ENST00000053469 1874 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
NKX2-1P43699 CISD2-201ENST00000273986 2327 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
NKX2-1P43699 ZNF454-201ENST00000320129 2332 ntAPPRIS P1 TSL 2 BASIC14.76□□□□□ -0.05
NKX2-1P43699 A4GALT-203ENST00000401850 2321 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
NKX2-1P43699 NEK3-206ENST00000611833 2345 ntAPPRIS ALT2 TSL 5 BASIC14.76□□□□□ -0.05
NKX2-1P43699 STRADA-254ENST00000640999 2336 ntAPPRIS ALT1 TSL 5 BASIC14.76□□□□□ -0.05
NKX2-1P43699 PPP4R3A-208ENST00000555462 3236 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
NKX2-1P43699 FNDC5-201ENST00000373471 2732 ntAPPRIS ALT2 TSL 2 BASIC14.76□□□□□ -0.05
NKX2-1P43699 WIPF2-210ENST00000585043 2693 ntAPPRIS P2 TSL 1 (best) BASIC14.76□□□□□ -0.05
NKX2-1P43699 EPN2-203ENST00000395618 2216 ntTSL 2 BASIC14.76□□□□□ -0.05
NKX2-1P43699 AC060780.1-201ENST00000635600 1782 ntTSL 5 BASIC14.76□□□□□ -0.05
NKX2-1P43699 STAT5A-207ENST00000546010 3086 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
NKX2-1P43699 AC091390.4-202ENST00000476426 537 ntBASIC14.76□□□□□ -0.05
NKX2-1P43699 CMTM3-207ENST00000564060 824 ntTSL 2 BASIC14.76□□□□□ -0.05
NKX2-1P43699 CMTM3-211ENST00000565922 615 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
NKX2-1P43699 TMEM191B-201ENST00000612978 1220 ntAPPRIS P2 TSL 5 BASIC14.76□□□□□ -0.05
NKX2-1P43699 AC103746.1-201ENST00000617440 1133 ntTSL 3 BASIC14.76□□□□□ -0.05
NKX2-1P43699 GPRIN2-201ENST00000374314 1696 ntAPPRIS P1 BASIC14.76□□□□□ -0.05
NKX2-1P43699 MEGF6-201ENST00000294599 4501 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
NKX2-1P43699 TCAF2-203ENST00000425618 2448 ntTSL 2 BASIC14.76□□□□□ -0.05
NKX2-1P43699 PARP16-202ENST00000444347 2352 ntTSL 2 BASIC14.76□□□□□ -0.05
NKX2-1P43699 ELMOD1-202ENST00000443271 1990 ntAPPRIS P1 TSL 2 BASIC14.76□□□□□ -0.05
NKX2-1P43699 ASTN2-205ENST00000361209 4622 ntAPPRIS P2 TSL 1 (best) BASIC14.76□□□□□ -0.05
NKX2-1P43699 SCAMP4-201ENST00000316097 2684 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
NKX2-1P43699 DOCK7-203ENST00000404627 2678 ntTSL 2 BASIC14.76□□□□□ -0.05
NKX2-1P43699 RASSF8-AS1-202ENST00000500276 2610 ntTSL 2 BASIC14.76□□□□□ -0.05
NKX2-1P43699 LMBR1L-204ENST00000547382 2235 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
NKX2-1P43699 MRPL3-202ENST00000425847 1457 ntTSL 2 BASIC14.76□□□□□ -0.05
NKX2-1P43699 PKD1P5-201ENST00000532415 10291 ntBASIC14.76□□□□□ -0.05
NKX2-1P43699 CLEC18B-206ENST00000620745 1847 ntTSL 5 BASIC14.76□□□□□ -0.05
NKX2-1P43699 KL-201ENST00000380099 5006 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
NKX2-1P43699 IFNGR1-201ENST00000367739 2139 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
NKX2-1P43699 IL12RB2-202ENST00000371000 2454 ntTSL 2 BASIC14.75□□□□□ -0.05
NKX2-1P43699 ETV7-202ENST00000340181 1719 ntAPPRIS P3 TSL 1 (best) BASIC14.75□□□□□ -0.05
NKX2-1P43699 DHRS4L2-201ENST00000335125 1370 ntAPPRIS P2 TSL 1 (best) BASIC14.75□□□□□ -0.05
NKX2-1P43699 CSF1-203ENST00000369801 1364 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
NKX2-1P43699 CREB3L1-206ENST00000621158 2687 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
NKX2-1P43699 NAT6-201ENST00000354862 1330 ntAPPRIS P3 TSL 1 (best) BASIC14.75□□□□□ -0.05
NKX2-1P43699 CEACAM3-202ENST00000357396 1316 ntAPPRIS P3 TSL 1 (best) BASIC14.75□□□□□ -0.05
NKX2-1P43699 RENBP-201ENST00000369997 1322 ntTSL 5 BASIC14.75□□□□□ -0.05
NKX2-1P43699 SARAF-214ENST00000545648 1976 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
NKX2-1P43699 TNFRSF19-202ENST00000382258 1625 ntAPPRIS P4 TSL 1 (best) BASIC14.75□□□□□ -0.05
NKX2-1P43699 LGALS12-203ENST00000394618 1618 ntAPPRIS P3 TSL 1 (best) BASIC14.75□□□□□ -0.05
NKX2-1P43699 PIN1-201ENST00000247970 997 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
NKX2-1P43699 PARL-201ENST00000311101 1240 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
NKX2-1P43699 HLA-DRB1-201ENST00000360004 1229 ntAPPRIS P1 BASIC14.75□□□□□ -0.05
NKX2-1P43699 HOXA9-202ENST00000396345 797 ntTSL 2 BASIC14.75□□□□□ -0.05
NKX2-1P43699 DGCR6L-202ENST00000405465 962 ntTSL 3 BASIC14.75□□□□□ -0.05
NKX2-1P43699 AC004951.3-201ENST00000418645 1148 ntBASIC14.75□□□□□ -0.05
NKX2-1P43699 JDP2-202ENST00000419727 972 ntAPPRIS P1 TSL 2 BASIC14.75□□□□□ -0.05
NKX2-1P43699 AC004980.1-204ENST00000429707 299 ntBASIC14.75□□□□□ -0.05
NKX2-1P43699 AC092171.1-201ENST00000455866 753 ntTSL 2 BASIC14.75□□□□□ -0.05
NKX2-1P43699 AC099522.1-201ENST00000505955 881 ntTSL 3 BASIC14.75□□□□□ -0.05
NKX2-1P43699 ATP6V0E1-204ENST00000519911 718 ntTSL 2 BASIC14.75□□□□□ -0.05
NKX2-1P43699 B3GAT3-205ENST00000534026 1120 ntTSL 2 BASIC14.75□□□□□ -0.05
NKX2-1P43699 SQSTM1-216ENST00000626660 274 ntTSL 5 BASIC14.75□□□□□ -0.05
NKX2-1P43699 MTFP1-206ENST00000629597 482 ntTSL 5 BASIC14.75□□□□□ -0.05
NKX2-1P43699 CMIP-201ENST00000398040 2825 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
NKX2-1P43699 SLC26A11-212ENST00000572725 1862 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
NKX2-1P43699 ARHGAP39-202ENST00000377307 4673 ntAPPRIS P3 TSL 5 BASIC14.75□□□□□ -0.05
NKX2-1P43699 PTK7-202ENST00000230419 4272 ntAPPRIS P3 TSL 1 (best) BASIC14.75□□□□□ -0.05
NKX2-1P43699 BCAM-206ENST00000589651 2686 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
NKX2-1P43699 PDIA5-201ENST00000316218 1799 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
NKX2-1P43699 AC009102.3-201ENST00000623118 1491 ntBASIC14.75□□□□□ -0.05
NKX2-1P43699 SCN3B-202ENST00000392770 6061 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
NKX2-1P43699 PSRC1-204ENST00000369909 1742 ntAPPRIS P3 TSL 1 (best) BASIC14.75□□□□□ -0.05
NKX2-1P43699 PLD3-205ENST00000409419 1966 ntAPPRIS P1 TSL 5 BASIC14.74□□□□□ -0.05
NKX2-1P43699 FOXO3-201ENST00000343882 7308 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
NKX2-1P43699 AC099343.3-201ENST00000605834 2503 ntBASIC14.74□□□□□ -0.05
NKX2-1P43699 BAP1-202ENST00000460680 3937 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
NKX2-1P43699 STK35-201ENST00000381482 6685 ntAPPRIS P1 TSL 5 BASIC14.74□□□□□ -0.05
NKX2-1P43699 BOC-212ENST00000485230 2173 ntTSL 2 BASIC14.74□□□□□ -0.05
NKX2-1P43699 IL4I1-204ENST00000595948 2407 ntAPPRIS P4 TSL 1 (best) BASIC14.74□□□□□ -0.05
NKX2-1P43699 COL18A1-203ENST00000359759 6586 ntAPPRIS ALT2 TSL 5 BASIC14.74□□□□□ -0.05
NKX2-1P43699 NEK10-202ENST00000341435 2638 ntTSL 2 BASIC14.74□□□□□ -0.05
NKX2-1P43699 AC010198.1-201ENST00000500076 1552 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
NKX2-1P43699 GIGYF1-201ENST00000275732 6530 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
NKX2-1P43699 RAB39A-201ENST00000320578 1830 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
NKX2-1P43699 ABLIM2-203ENST00000361737 3396 ntAPPRIS ALT2 TSL 2 BASIC14.74□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 50.6 ms