Protein–RNA interactions for Protein: P40818

USP8, Ubiquitin carboxyl-terminal hydrolase 8, humanhuman

Predictions only

Length 1,118 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP8P40818 SMAD3-201ENST00000327367 6247 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
USP8P40818 RPN2-201ENST00000237530 2515 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
USP8P40818 NARFL-218ENST00000568545 2486 ntTSL 2 BASIC19.63■□□□□ 0.73
USP8P40818 MED17-201ENST00000251871 5142 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
USP8P40818 UBQLN4-201ENST00000368309 3576 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
USP8P40818 TPD52L1-202ENST00000368388 2147 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
USP8P40818 HNRNPK-202ENST00000360384 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC19.63■□□□□ 0.73
USP8P40818 EXO5-202ENST00000358527 1892 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
USP8P40818 MYBPH-201ENST00000255416 1805 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
USP8P40818 TRAF4-201ENST00000262395 2923 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
USP8P40818 TRIL-201ENST00000539664 4935 ntAPPRIS P1 BASIC19.62■□□□□ 0.73
USP8P40818 DSCR9-201ENST00000454482 1644 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
USP8P40818 LRRC32-202ENST00000404995 2656 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
USP8P40818 AJUBA-202ENST00000361265 2569 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
USP8P40818 RAB33B-201ENST00000305626 4562 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
USP8P40818 ACD-215ENST00000620761 1483 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
USP8P40818 KLHDC4-227ENST00000622456 1422 ntTSL 5 BASIC19.62■□□□□ 0.73
USP8P40818 CYP7B1-201ENST00000310193 2202 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
USP8P40818 CUTC-202ENST00000370476 1346 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
USP8P40818 OCIAD2-201ENST00000273860 636 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
USP8P40818 GPR6-201ENST00000275169 1089 ntAPPRIS P1 BASIC19.62■□□□□ 0.73
USP8P40818 VKORC1-202ENST00000319788 1077 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
USP8P40818 MFGE8-203ENST00000542878 1172 ntTSL 2 BASIC19.62■□□□□ 0.73
USP8P40818 ETFA-216ENST00000560726 942 ntTSL 3 BASIC19.62■□□□□ 0.73
USP8P40818 NEK4P2-201ENST00000580004 1012 ntBASIC19.62■□□□□ 0.73
USP8P40818 TXNL4A-211ENST00000592837 611 ntTSL 2 BASIC19.62■□□□□ 0.73
USP8P40818 OCIAD2-210ENST00000620187 697 ntTSL 3 BASIC19.62■□□□□ 0.73
USP8P40818 AC092865.7-201ENST00000641832 219 ntBASIC19.62■□□□□ 0.73
USP8P40818 CASZ1-202ENST00000377022 7936 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
USP8P40818 THAP3-203ENST00000377627 2053 ntAPPRIS P3 TSL 2 BASIC19.62■□□□□ 0.73
USP8P40818 CCDC92-201ENST00000238156 2787 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
USP8P40818 PANX1-202ENST00000436171 2750 ntAPPRIS ALT1 TSL 1 (best) BASIC19.62■□□□□ 0.73
USP8P40818 PCDHGC5-202ENST00000610789 2763 ntAPPRIS ALT2 BASIC19.62■□□□□ 0.73
USP8P40818 FCMR-201ENST00000367091 1950 ntAPPRIS P3 TSL 1 (best) BASIC19.62■□□□□ 0.73
USP8P40818 ADARB1-202ENST00000360697 6604 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
USP8P40818 RGMB-AS1-201ENST00000498871 1903 ntTSL 2 BASIC19.62■□□□□ 0.73
USP8P40818 AC005833.1-201ENST00000280684 4237 ntAPPRIS P1 BASIC19.62■□□□□ 0.73
USP8P40818 TLL1-204ENST00000507499 4818 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
USP8P40818 KLC2-203ENST00000394066 2591 ntTSL 2 BASIC19.62■□□□□ 0.73
USP8P40818 LMNA-207ENST00000368301 2461 ntTSL 2 BASIC19.62■□□□□ 0.73
USP8P40818 CDH23-205ENST00000398809 4533 ntTSL 5 BASIC19.62■□□□□ 0.73
USP8P40818 SBNO2-204ENST00000587024 4861 ntAPPRIS ALT2 TSL 2 BASIC19.62■□□□□ 0.73
USP8P40818 NKD2-202ENST00000296849 2155 ntAPPRIS P3 TSL 1 (best) BASIC19.61■□□□□ 0.73
USP8P40818 FAM3A-204ENST00000369643 1521 ntAPPRIS P1 TSL 2 BASIC19.61■□□□□ 0.73
USP8P40818 FFAR2-202ENST00000599180 2133 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
USP8P40818 KANSL2-212ENST00000550347 2714 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
USP8P40818 FBXO33-201ENST00000298097 3853 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
USP8P40818 HPCA-201ENST00000373467 1468 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
USP8P40818 TMPRSS9-205ENST00000613480 2568 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
USP8P40818 TRAF3IP1-202ENST00000391993 4003 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
USP8P40818 RTBDN-201ENST00000322912 1328 ntAPPRIS P3 TSL 1 (best) BASIC19.61■□□□□ 0.73
USP8P40818 RABEP2-202ENST00000358201 2821 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
USP8P40818 AC007952.1-201ENST00000399087 553 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
USP8P40818 AC007952.2-202ENST00000399093 556 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
USP8P40818 PRTN3-202ENST00000544537 1036 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
USP8P40818 AL023973.1-201ENST00000624619 620 ntBASIC19.61■□□□□ 0.73
USP8P40818 AC106017.2-202ENST00000628484 536 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
USP8P40818 DNAJB6-218ENST00000634080 1005 ntTSL 2 BASIC19.61■□□□□ 0.73
USP8P40818 ATOH1-201ENST00000306011 2212 ntAPPRIS P1 BASIC19.61■□□□□ 0.73
USP8P40818 SLCO4A1-202ENST00000370507 2665 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
USP8P40818 RUVBL1-202ENST00000464873 2126 ntTSL 2 BASIC19.61■□□□□ 0.73
USP8P40818 LINC01126-201ENST00000623515 1646 ntBASIC19.61■□□□□ 0.73
USP8P40818 NOS3-210ENST00000484524 2537 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
USP8P40818 LINC00634-201ENST00000381348 1510 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
USP8P40818 HAUS8-202ENST00000448593 1545 ntAPPRIS ALT2 TSL 5 BASIC19.61■□□□□ 0.73
USP8P40818 ARHGAP11A-201ENST00000361627 5898 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
USP8P40818 ZNF48-205ENST00000613509 3339 ntAPPRIS P1 TSL 2 BASIC19.6■□□□□ 0.73
USP8P40818 CDK11B-201ENST00000340677 2534 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
USP8P40818 VPS26A-202ENST00000373382 3229 ntAPPRIS P1 TSL 5 BASIC19.6■□□□□ 0.73
USP8P40818 BIRC7-202ENST00000342412 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
USP8P40818 SLC23A3-207ENST00000455516 2048 ntTSL 2 BASIC19.6■□□□□ 0.73
USP8P40818 SCGB3A1-201ENST00000292641 521 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
USP8P40818 AP000523.1-201ENST00000398242 1049 ntBASIC19.6■□□□□ 0.73
USP8P40818 ICAM1-202ENST00000423829 1296 ntTSL 2 BASIC19.6■□□□□ 0.73
USP8P40818 NDUFV2-207ENST00000497577 868 ntTSL 2 BASIC19.6■□□□□ 0.73
USP8P40818 AC090970.2-201ENST00000561318 865 ntTSL 5 BASIC19.6■□□□□ 0.73
USP8P40818 MIR3180-4-201ENST00000582223 153 ntBASIC19.6■□□□□ 0.73
USP8P40818 NUDT16L1-203ENST00000586252 922 ntTSL 3 BASIC19.6■□□□□ 0.73
USP8P40818 CALM3-208ENST00000596362 1203 ntAPPRIS P1 TSL 2 BASIC19.6■□□□□ 0.73
USP8P40818 AC140113.3-201ENST00000605663 199 ntBASIC19.6■□□□□ 0.73
USP8P40818 PHOSPHO2-206ENST00000616481 1252 ntAPPRIS P1 TSL 3 BASIC19.6■□□□□ 0.73
USP8P40818 PHOSPHO2-208ENST00000617738 1053 ntAPPRIS P1 TSL 2 BASIC19.6■□□□□ 0.73
USP8P40818 AC005363.2-201ENST00000618631 242 ntBASIC19.6■□□□□ 0.73
USP8P40818 AP3D1-201ENST00000345016 4870 ntAPPRIS P3 TSL 1 (best) BASIC19.6■□□□□ 0.73
USP8P40818 LINC00574-201ENST00000420557 2318 ntTSL 2 BASIC19.6■□□□□ 0.73
USP8P40818 ZNF644-201ENST00000337393 5763 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
USP8P40818 PDE4D-204ENST00000358923 2969 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
USP8P40818 OGFOD2-212ENST00000538755 1949 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
USP8P40818 BTBD3-201ENST00000254977 4686 ntAPPRIS ALT1 TSL 2 BASIC19.6■□□□□ 0.73
USP8P40818 SMARCA4-203ENST00000429416 5691 ntTSL 2 BASIC19.6■□□□□ 0.73
USP8P40818 LRCH2-201ENST00000317135 4929 ntAPPRIS P3 TSL 1 (best) BASIC19.6■□□□□ 0.73
USP8P40818 TRAPPC11-201ENST00000334690 4552 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
USP8P40818 MTHFD1L-211ENST00000611279 3475 ntAPPRIS ALT1 TSL 5 BASIC19.6■□□□□ 0.73
USP8P40818 GABRB1-201ENST00000295454 2143 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
USP8P40818 ATRIP-203ENST00000357105 2403 ntTSL 2 BASIC19.6■□□□□ 0.73
USP8P40818 EIPR1-201ENST00000382125 1766 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
USP8P40818 FAM210A-201ENST00000322247 4340 ntAPPRIS P1 TSL 2 BASIC19.6■□□□□ 0.73
USP8P40818 SATB1-201ENST00000338745 7810 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
USP8P40818 MARCH1-203ENST00000503008 5877 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
USP8P40818 STN1-201ENST00000224950 1417 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 51.7 ms