Protein–RNA interactions for Protein: P35712

SOX6, Transcription factor SOX-6, humanhuman

Predictions only

Length 828 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX6P35712 MAEA-202ENST00000303400 2222 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
SOX6P35712 SUPT4H1-202ENST00000577396 1643 ntTSL 2 BASIC16.17■□□□□ 0.18
SOX6P35712 ZNF503-201ENST00000372524 3347 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
SOX6P35712 GALNT11-205ENST00000430044 2727 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
SOX6P35712 IZUMO2-201ENST00000293405 728 ntAPPRIS P2 TSL 1 (best) BASIC16.17■□□□□ 0.18
SOX6P35712 ASL-201ENST00000304874 2143 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
SOX6P35712 PPP1CA-202ENST00000358239 1054 ntTSL 2 BASIC16.17■□□□□ 0.18
SOX6P35712 ID1-201ENST00000376105 1233 ntBASIC16.17■□□□□ 0.18
SOX6P35712 LYPD5-202ENST00000414615 2137 ntAPPRIS P3 TSL 2 BASIC16.17■□□□□ 0.18
SOX6P35712 PRELID2-204ENST00000505416 738 ntAPPRIS P2 TSL 3 BASIC16.17■□□□□ 0.18
SOX6P35712 AC005829.2-201ENST00000571422 1056 ntBASIC16.17■□□□□ 0.18
SOX6P35712 ZNF263-205ENST00000574253 1139 ntTSL 2 BASIC16.17■□□□□ 0.18
SOX6P35712 NFATC1-208ENST00000586434 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
SOX6P35712 PTCRA-204ENST00000616441 1125 ntAPPRIS ALT2 TSL 2 BASIC16.17■□□□□ 0.18
SOX6P35712 INPP5J-202ENST00000400294 2393 ntTSL 2 BASIC16.17■□□□□ 0.18
SOX6P35712 JHDM1D-AS1-201ENST00000566699 2380 ntBASIC16.17■□□□□ 0.18
SOX6P35712 STK24-203ENST00000397517 4578 ntTSL 2 BASIC16.17■□□□□ 0.18
SOX6P35712 KRT17P1-201ENST00000399211 1546 ntBASIC16.17■□□□□ 0.18
SOX6P35712 SMOC1-201ENST00000361956 2040 ntAPPRIS ALT1 TSL 1 (best) BASIC16.17■□□□□ 0.18
SOX6P35712 SYNGR2-206ENST00000589711 2041 ntTSL 5 BASIC16.17■□□□□ 0.18
SOX6P35712 KLHDC3-201ENST00000244670 1903 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
SOX6P35712 PRSS53-201ENST00000280606 2181 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
SOX6P35712 DDX28-201ENST00000332395 2169 ntAPPRIS P1 BASIC16.17■□□□□ 0.18
SOX6P35712 CTSL-203ENST00000343150 2177 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
SOX6P35712 KLF6-204ENST00000469435 2169 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
SOX6P35712 PIGP-207ENST00000464265 3437 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
SOX6P35712 ABHD14B-206ENST00000483233 2056 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
SOX6P35712 NUP62-211ENST00000597029 2053 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
SOX6P35712 UBE2E3-209ENST00000602710 1556 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
SOX6P35712 OSBP2-202ENST00000401475 2468 ntTSL 2 BASIC16.17■□□□□ 0.18
SOX6P35712 ANKRD26-201ENST00000376087 6591 ntAPPRIS P2 TSL 5 BASIC16.16■□□□□ 0.18
SOX6P35712 PDE1C-201ENST00000321453 2898 ntAPPRIS ALT1 TSL 2 BASIC16.16■□□□□ 0.18
SOX6P35712 DOC2GP-204ENST00000639052 2548 ntBASIC16.16■□□□□ 0.18
SOX6P35712 MINOS1-NBL1-204ENST00000602662 1623 ntAPPRIS P1 TSL 2 BASIC16.16■□□□□ 0.18
SOX6P35712 C7orf31-201ENST00000283905 2673 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
SOX6P35712 FAM9B-202ENST00000362066 2047 ntTSL 2 BASIC16.16■□□□□ 0.18
SOX6P35712 GBA2-203ENST00000378103 3611 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
SOX6P35712 MEI1-215ENST00000540833 2326 ntTSL 5 BASIC16.16■□□□□ 0.18
SOX6P35712 PRSS36-207ENST00000569305 2723 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
SOX6P35712 KCNE3-201ENST00000310128 3143 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
SOX6P35712 UHMK1-202ENST00000489294 8478 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
SOX6P35712 NRSN2-202ENST00000382291 2088 ntAPPRIS P1 TSL 2 BASIC16.16■□□□□ 0.18
SOX6P35712 HOXB6-201ENST00000225648 1660 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
SOX6P35712 UVSSA-209ENST00000512728 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
SOX6P35712 NAA20-202ENST00000334982 1260 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
SOX6P35712 PSEN1-203ENST00000394157 1249 ntTSL 2 BASIC16.16■□□□□ 0.18
SOX6P35712 NOXO1-203ENST00000397280 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
SOX6P35712 FAM229A-204ENST00000432622 699 ntAPPRIS P2 TSL 2 BASIC16.16■□□□□ 0.18
SOX6P35712 RPS2P52-201ENST00000469610 820 ntBASIC16.16■□□□□ 0.18
SOX6P35712 FBXL8-203ENST00000518148 1054 ntTSL 2 BASIC16.16■□□□□ 0.18
SOX6P35712 SNHG6-203ENST00000520944 638 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
SOX6P35712 NOXO1-205ENST00000566005 1144 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
SOX6P35712 RBPJ-205ENST00000355476 5990 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
SOX6P35712 LMF1-201ENST00000262301 2621 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
SOX6P35712 SACS-AS1-201ENST00000443092 2234 ntTSL 2 BASIC16.16■□□□□ 0.18
SOX6P35712 TDRD6-201ENST00000316081 6817 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
SOX6P35712 GRIN2C-202ENST00000347612 2929 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
SOX6P35712 PPP1R7-202ENST00000272983 1954 ntTSL 2 BASIC16.16■□□□□ 0.18
SOX6P35712 CDC25B-202ENST00000340833 1978 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
SOX6P35712 THUMPD2-204ENST00000505747 1970 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
SOX6P35712 GAS7-213ENST00000580865 2417 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
SOX6P35712 KCNJ2-AS1-201ENST00000590966 2442 ntBASIC16.16■□□□□ 0.18
SOX6P35712 LRRFIP1-201ENST00000244815 4370 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
SOX6P35712 TSKS-201ENST00000246801 1883 ntAPPRIS P2 TSL 1 (best) BASIC16.16■□□□□ 0.18
SOX6P35712 TSC22D4-202ENST00000393991 1469 ntTSL 2 BASIC16.16■□□□□ 0.18
SOX6P35712 PHGDH-209ENST00000641074 1780 ntBASIC16.15■□□□□ 0.18
SOX6P35712 UQCC3-201ENST00000377953 1947 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
SOX6P35712 TBC1D3I-202ENST00000618620 1900 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
SOX6P35712 SARS2-201ENST00000221431 2057 ntAPPRIS P2 TSL 1 (best) BASIC16.15■□□□□ 0.18
SOX6P35712 PRKAG1-206ENST00000548065 2071 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
SOX6P35712 DMTN-223ENST00000523782 2235 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
SOX6P35712 TNKS1BP1-207ENST00000532437 5952 ntAPPRIS P2 TSL 1 (best) BASIC16.15■□□□□ 0.18
SOX6P35712 WIPF2-210ENST00000585043 2693 ntAPPRIS P2 TSL 1 (best) BASIC16.15■□□□□ 0.18
SOX6P35712 NPC1L1-203ENST00000423141 2554 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
SOX6P35712 CDH6-205ENST00000514738 2569 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
SOX6P35712 HOXA6-201ENST00000222728 989 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
SOX6P35712 MED10-201ENST00000255764 1141 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
SOX6P35712 USP42-201ENST00000306177 5155 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
SOX6P35712 C12orf29-201ENST00000356891 2919 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
SOX6P35712 PPOX-202ENST00000367999 1740 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
SOX6P35712 NAIF1-201ENST00000373078 3399 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
SOX6P35712 MIPEPP3-201ENST00000412105 444 ntBASIC16.15■□□□□ 0.18
SOX6P35712 SERPINH1P1-201ENST00000419794 1249 ntBASIC16.15■□□□□ 0.18
SOX6P35712 HLA-L-209ENST00000420110 1011 ntBASIC16.15■□□□□ 0.18
SOX6P35712 ACAA1-209ENST00000450296 1570 ntTSL 5 BASIC16.15■□□□□ 0.18
SOX6P35712 MTAP-204ENST00000460874 1434 ntTSL 2 BASIC16.15■□□□□ 0.18
SOX6P35712 AC105285.1-202ENST00000499322 1866 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
SOX6P35712 AL160286.2-201ENST00000567150 934 ntBASIC16.15■□□□□ 0.18
SOX6P35712 MIR4758-201ENST00000577688 71 ntBASIC16.15■□□□□ 0.18
SOX6P35712 SLC25A35-202ENST00000577745 1860 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
SOX6P35712 AC104771.1-201ENST00000603335 964 ntBASIC16.15■□□□□ 0.18
SOX6P35712 HNF1A-216ENST00000617366 2473 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
SOX6P35712 OGFR-204ENST00000621591 1194 ntTSL 5 BASIC16.15■□□□□ 0.18
SOX6P35712 MARK4-211ENST00000622871 1147 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
SOX6P35712 MARS-234ENST00000630571 216 ntTSL 5 BASIC16.15■□□□□ 0.18
SOX6P35712 MARS-235ENST00000630803 183 ntTSL 3 BASIC16.15■□□□□ 0.18
SOX6P35712 CCDC71L-202ENST00000523505 4232 ntAPPRIS P2 BASIC16.15■□□□□ 0.18
SOX6P35712 GPR83-202ENST00000539203 1909 ntTSL 5 BASIC16.15■□□□□ 0.18
SOX6P35712 SIGIRR-201ENST00000332725 1639 ntAPPRIS P1 TSL 2 BASIC16.15■□□□□ 0.18
SOX6P35712 HMBS-214ENST00000542729 1469 ntTSL 2 BASIC16.15■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 26.2 ms