Protein–RNA interactions for Protein: P35249

RFC4, Replication factor C subunit 4, humanhuman

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4P35249 AC012645.3-201ENST00000568506 470 ntTSL 3 BASIC22.53■■□□□ 1.2
RFC4P35249 TRIM29-221ENST00000627238 510 ntTSL 5 BASIC22.53■■□□□ 1.2
RFC4P35249 ZAR1L-202ENST00000533490 1564 ntAPPRIS P1 TSL 5 BASIC22.53■■□□□ 1.2
RFC4P35249 CACNB3-202ENST00000536187 1872 ntTSL 2 BASIC22.53■■□□□ 1.2
RFC4P35249 KRT1-201ENST00000252244 2451 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
RFC4P35249 PPTC7-201ENST00000354300 4996 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
RFC4P35249 TMEM59L-201ENST00000262817 1613 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
RFC4P35249 JMJD6-202ENST00000397625 1603 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
RFC4P35249 CHEK2-202ENST00000348295 1771 ntTSL 5 BASIC22.53■■□□□ 1.2
RFC4P35249 PRMT5-201ENST00000216350 2271 ntTSL 2 BASIC22.52■■□□□ 1.2
RFC4P35249 ANKRD53-202ENST00000360589 1666 ntAPPRIS ALT2 TSL 2 BASIC22.52■■□□□ 1.2
RFC4P35249 TBC1D10C-203ENST00000526387 1520 ntTSL 2 BASIC22.52■■□□□ 1.2
RFC4P35249 SOBP-201ENST00000317357 5245 ntAPPRIS P1 TSL 5 BASIC22.52■■□□□ 1.2
RFC4P35249 AC006504.4-201ENST00000592118 1568 ntBASIC22.52■■□□□ 1.2
RFC4P35249 COCH-201ENST00000216361 2397 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
RFC4P35249 LINC01105-206ENST00000456327 1434 ntTSL 5 BASIC22.52■■□□□ 1.2
RFC4P35249 H2AFZ-201ENST00000296417 979 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
RFC4P35249 CD82-202ENST00000342935 967 ntTSL 5 BASIC22.52■■□□□ 1.2
RFC4P35249 ID3-201ENST00000374561 1251 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
RFC4P35249 HOXB-AS4-202ENST00000480386 566 ntTSL 4 BASIC22.52■■□□□ 1.2
RFC4P35249 HOXC-AS3-202ENST00000513165 533 ntTSL 3 BASIC22.52■■□□□ 1.2
RFC4P35249 HOXD8-204ENST00000544999 1235 ntAPPRIS ALT2 TSL 5 BASIC22.52■■□□□ 1.2
RFC4P35249 ZFPM1-203ENST00000562437 502 ntTSL 2 BASIC22.52■■□□□ 1.2
RFC4P35249 AP002472.1-201ENST00000577490 586 ntBASIC22.52■■□□□ 1.2
RFC4P35249 PYCR1-207ENST00000577756 1144 ntTSL 2 BASIC22.52■■□□□ 1.2
RFC4P35249 EHMT1-204ENST00000462484 2707 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
RFC4P35249 NDN-201ENST00000331837 1931 ntAPPRIS P1 BASIC22.52■■□□□ 1.2
RFC4P35249 GFAP-203ENST00000435360 1779 ntTSL 2 BASIC22.52■■□□□ 1.2
RFC4P35249 RPS6KL1-216ENST00000557413 2425 ntAPPRIS P1 TSL 5 BASIC22.52■■□□□ 1.2
RFC4P35249 FGFR1-238ENST00000532791 5590 ntAPPRIS ALT1 TSL 5 BASIC22.52■■□□□ 1.2
RFC4P35249 GSN-204ENST00000373818 2657 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
RFC4P35249 YY1AP1-213ENST00000405763 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC22.52■■□□□ 1.19
RFC4P35249 PARP2-202ENST00000429687 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC22.51■■□□□ 1.19
RFC4P35249 KRT8P47-201ENST00000604727 1398 ntBASIC22.51■■□□□ 1.19
RFC4P35249 AZU1-202ENST00000592205 1713 ntTSL 2 BASIC22.51■■□□□ 1.19
RFC4P35249 CLPB-202ENST00000340729 2071 ntTSL 2 BASIC22.51■■□□□ 1.19
RFC4P35249 PIANP-204ENST00000540656 2432 ntAPPRIS P3 TSL 2 BASIC22.51■■□□□ 1.19
RFC4P35249 GMCL1P1-201ENST00000463439 1581 ntBASIC22.51■■□□□ 1.19
RFC4P35249 RARRES1-201ENST00000237696 1952 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
RFC4P35249 ARMC12-201ENST00000288065 1169 ntTSL 1 (best) BASIC22.51■■□□□ 1.19
RFC4P35249 MRPS18A-202ENST00000372133 1062 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
RFC4P35249 ELK2BP-201ENST00000415014 1224 ntBASIC22.51■■□□□ 1.19
RFC4P35249 NKTR-203ENST00000442970 646 ntTSL 2 BASIC22.51■■□□□ 1.19
RFC4P35249 AC108073.2-201ENST00000464002 357 ntBASIC22.51■■□□□ 1.19
RFC4P35249 LMX1B-203ENST00000526117 1195 ntTSL 1 (best) BASIC22.51■■□□□ 1.19
RFC4P35249 MAL2-202ENST00000531508 892 ntTSL 3 BASIC22.51■■□□□ 1.19
RFC4P35249 TRMT112-202ENST00000535126 704 ntTSL 2 BASIC22.51■■□□□ 1.19
RFC4P35249 PXN-AS1-201ENST00000535200 1170 ntTSL 2 BASIC22.51■■□□□ 1.19
RFC4P35249 AC008992.1-201ENST00000591132 446 ntTSL 2 BASIC22.51■■□□□ 1.19
RFC4P35249 AL513190.1-201ENST00000621254 727 ntBASIC22.51■■□□□ 1.19
RFC4P35249 PTGER2-201ENST00000245457 2383 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
RFC4P35249 SLC22A1-203ENST00000457470 1452 ntTSL 5 BASIC22.51■■□□□ 1.19
RFC4P35249 TLX2-204ENST00000621092 1452 ntTSL 1 (best) BASIC22.51■■□□□ 1.19
RFC4P35249 C2orf27B-201ENST00000623129 1325 ntTSL 1 (best) BASIC22.51■■□□□ 1.19
RFC4P35249 NES-201ENST00000368223 5558 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
RFC4P35249 DEPTOR-203ENST00000523492 1397 ntTSL 2 BASIC22.5■■□□□ 1.19
RFC4P35249 ZIC3-202ENST00000370606 1968 ntTSL 5 BASIC22.5■■□□□ 1.19
RFC4P35249 RETREG2-203ENST00000430297 4618 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
RFC4P35249 CPEB2-202ENST00000345451 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC22.5■■□□□ 1.19
RFC4P35249 NABP2-201ENST00000267023 1417 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
RFC4P35249 KCNK6-201ENST00000263372 5722 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
RFC4P35249 AP4S1-202ENST00000313566 839 ntTSL 3 BASIC22.5■■□□□ 1.19
RFC4P35249 GUK1-203ENST00000366718 1275 ntAPPRIS P3 TSL 3 BASIC22.5■■□□□ 1.19
RFC4P35249 AL020989.1-201ENST00000422979 469 ntBASIC22.5■■□□□ 1.19
RFC4P35249 MKNK2P1-201ENST00000437526 628 ntBASIC22.5■■□□□ 1.19
RFC4P35249 DARS-AS1-203ENST00000438432 768 ntTSL 3 BASIC22.5■■□□□ 1.19
RFC4P35249 OR5AH1P-202ENST00000597822 431 ntTSL 3 BASIC22.5■■□□□ 1.19
RFC4P35249 AL078644.1-201ENST00000609881 752 ntBASIC22.5■■□□□ 1.19
RFC4P35249 CLN3-255ENST00000637100 1284 ntTSL 5 BASIC22.5■■□□□ 1.19
RFC4P35249 GTF2IRD2-207ENST00000625377 1910 ntTSL 5 BASIC22.5■■□□□ 1.19
RFC4P35249 IDH3G-202ENST00000370092 1712 ntTSL 5 BASIC22.5■■□□□ 1.19
RFC4P35249 LPAR3-201ENST00000370611 1720 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
RFC4P35249 AGAP1-205ENST00000409538 6138 ntTSL 5 BASIC22.5■■□□□ 1.19
RFC4P35249 DLX2-201ENST00000234198 2453 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
RFC4P35249 EGR3-204ENST00000522910 1553 ntAPPRIS ALT1 TSL 2 BASIC22.5■■□□□ 1.19
RFC4P35249 SEL1L-204ENST00000555824 1631 ntTSL 1 (best) BASIC22.49■■□□□ 1.19
RFC4P35249 TMEM109-201ENST00000227525 2413 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
RFC4P35249 TECR-201ENST00000215567 1171 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
RFC4P35249 MYL6-202ENST00000348108 722 ntAPPRIS ALT1 TSL 3 BASIC22.49■■□□□ 1.19
RFC4P35249 FAM19A5-204ENST00000406880 833 ntTSL 3 BASIC22.49■■□□□ 1.19
RFC4P35249 HCG4B-203ENST00000450128 991 ntBASIC22.49■■□□□ 1.19
RFC4P35249 ARTN-206ENST00000472435 402 ntTSL 3 BASIC22.49■■□□□ 1.19
RFC4P35249 SPATA33-208ENST00000568929 1264 ntAPPRIS ALT2 TSL 2 BASIC22.49■■□□□ 1.19
RFC4P35249 CYB561-217ENST00000582997 877 ntTSL 5 BASIC22.49■■□□□ 1.19
RFC4P35249 AC092364.2-202ENST00000597012 1073 ntBASIC22.49■■□□□ 1.19
RFC4P35249 ORC5-208ENST00000626700 344 ntTSL 3 BASIC22.49■■□□□ 1.19
RFC4P35249 LINC01011-201ENST00000445000 2811 ntTSL 2 BASIC22.49■■□□□ 1.19
RFC4P35249 ZNF346-201ENST00000358149 2314 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
RFC4P35249 RGS19-202ENST00000395042 1593 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
RFC4P35249 ACBD4-207ENST00000586346 1579 ntTSL 1 (best) BASIC22.49■■□□□ 1.19
RFC4P35249 CCDC7-203ENST00000362006 2133 ntAPPRIS P2 TSL 1 (best) BASIC22.49■■□□□ 1.19
RFC4P35249 PAX4-204ENST00000463946 1613 ntTSL 1 (best) BASIC22.49■■□□□ 1.19
RFC4P35249 ELL2P1-201ENST00000413990 1906 ntBASIC22.49■■□□□ 1.19
RFC4P35249 EPS8L1-201ENST00000201647 2536 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
RFC4P35249 GMPPA-204ENST00000373908 1501 ntAPPRIS P1 TSL 5 BASIC22.48■■□□□ 1.19
RFC4P35249 SAMD11-216ENST00000620200 1874 ntTSL 5 BASIC22.48■■□□□ 1.19
RFC4P35249 EHBP1-209ENST00000431489 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC22.48■■□□□ 1.19
RFC4P35249 PDCD2L-201ENST00000246535 1171 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
RFC4P35249 SPACA4-201ENST00000321762 972 ntAPPRIS P1 BASIC22.48■■□□□ 1.19
RFC4P35249 PNMT-202ENST00000394246 821 ntTSL 2 BASIC22.48■■□□□ 1.19
Retrieved 100 of 98,524 protein–RNA pairs in 61.7 ms