Protein–RNA interactions for Protein: P31269

HOXA9, Homeobox protein Hox-A9, humanhuman

Predictions only

Length 272 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA9P31269 LCE1E-203ENST00000619588 267 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
HOXA9P31269 NPAS4-204ENST00000639555 878 ntTSL 5 BASIC18.67■□□□□ 0.58
HOXA9P31269 GGN-201ENST00000334928 2239 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
HOXA9P31269 NFATC4-220ENST00000555393 2235 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
HOXA9P31269 C2orf27B-201ENST00000623129 1325 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
HOXA9P31269 TNFSF13-205ENST00000396545 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC18.67■□□□□ 0.58
HOXA9P31269 AC010460.3-201ENST00000511359 1579 ntBASIC18.67■□□□□ 0.58
HOXA9P31269 SH3BP5-203ENST00000408919 1880 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
HOXA9P31269 SLC22A23-205ENST00000436008 6641 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
HOXA9P31269 MCC-208ENST00000514701 2855 ntTSL 2 BASIC18.67■□□□□ 0.58
HOXA9P31269 TMEM8A-204ENST00000431232 3691 ntAPPRIS P2 TSL 1 (best) BASIC18.67■□□□□ 0.58
HOXA9P31269 MOXD1-203ENST00000392401 2191 ntTSL 4 BASIC18.66■□□□□ 0.58
HOXA9P31269 CPQ-201ENST00000220763 1947 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
HOXA9P31269 TRMT44-205ENST00000513449 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
HOXA9P31269 FOXP4-205ENST00000409208 3341 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
HOXA9P31269 AL031598.1-201ENST00000561511 1773 ntBASIC18.66■□□□□ 0.58
HOXA9P31269 PCDHA4-201ENST00000378125 2328 ntTSL 5 BASIC18.66■□□□□ 0.58
HOXA9P31269 STARD7-AS1-202ENST00000446816 1527 ntTSL 2 BASIC18.66■□□□□ 0.58
HOXA9P31269 AL512785.2-202ENST00000367932 830 ntTSL 4 BASIC18.66■□□□□ 0.58
HOXA9P31269 DPM3-203ENST00000368400 409 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
HOXA9P31269 CENPM-204ENST00000402420 688 ntTSL 5 BASIC18.66■□□□□ 0.58
HOXA9P31269 VPS13A-AS1-201ENST00000415172 519 ntTSL 2 BASIC18.66■□□□□ 0.58
HOXA9P31269 AC005104.2-201ENST00000427818 678 ntBASIC18.66■□□□□ 0.58
HOXA9P31269 AFG3L1P-210ENST00000431757 569 ntTSL 4 BASIC18.66■□□□□ 0.58
HOXA9P31269 AC092183.1-201ENST00000469884 875 ntBASIC18.66■□□□□ 0.58
HOXA9P31269 AP005233.2-201ENST00000561588 372 ntTSL 3 BASIC18.66■□□□□ 0.58
HOXA9P31269 AC040169.1-201ENST00000565382 521 ntBASIC18.66■□□□□ 0.58
HOXA9P31269 BORCS8-206ENST00000585679 801 ntTSL 3 BASIC18.66■□□□□ 0.58
HOXA9P31269 AC243773.2-203ENST00000612281 640 ntTSL 3 BASIC18.66■□□□□ 0.58
HOXA9P31269 PGM5P2-202ENST00000637225 1043 ntBASIC18.66■□□□□ 0.58
HOXA9P31269 AC022898.2-201ENST00000616822 1312 ntBASIC18.66■□□□□ 0.58
HOXA9P31269 AL079301.1-201ENST00000424580 1633 ntTSL 2 BASIC18.66■□□□□ 0.58
HOXA9P31269 RPL32-202ENST00000396953 1734 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
HOXA9P31269 GIPR-201ENST00000263281 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
HOXA9P31269 GLRB-207ENST00000541722 2765 ntTSL 5 BASIC18.65■□□□□ 0.58
HOXA9P31269 TINAGL1-202ENST00000457433 2140 ntAPPRIS ALT2 TSL 2 BASIC18.65■□□□□ 0.58
HOXA9P31269 BTG3-202ENST00000348354 1456 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
HOXA9P31269 GPN3-202ENST00000537466 1491 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
HOXA9P31269 AP002414.3-201ENST00000589352 1468 ntBASIC18.65■□□□□ 0.58
HOXA9P31269 NOP14-202ENST00000398071 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
HOXA9P31269 KRT9-201ENST00000246662 2290 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
HOXA9P31269 LSM12-201ENST00000293406 2308 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
HOXA9P31269 KIF25-203ENST00000443060 1613 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
HOXA9P31269 ZHX1-C8orf76-201ENST00000357082 1257 ntAPPRIS P2 TSL 2 BASIC18.65■□□□□ 0.58
HOXA9P31269 C22orf39-203ENST00000399568 1005 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
HOXA9P31269 AGTRAP-205ENST00000400895 786 ntTSL 2 BASIC18.65■□□□□ 0.58
HOXA9P31269 CR559946.1-201ENST00000453835 531 ntTSL 4 BASIC18.65■□□□□ 0.58
HOXA9P31269 NDUFB2-208ENST00000471136 499 ntTSL 3 BASIC18.65■□□□□ 0.58
HOXA9P31269 AC091133.2-201ENST00000505903 428 ntTSL 3 BASIC18.65■□□□□ 0.58
HOXA9P31269 AC068389.2-201ENST00000529518 430 ntTSL 2 BASIC18.65■□□□□ 0.58
HOXA9P31269 CHMP1A-208ENST00000550102 803 ntTSL 5 BASIC18.65■□□□□ 0.58
HOXA9P31269 AC025162.1-201ENST00000554022 565 ntTSL 4 BASIC18.65■□□□□ 0.58
HOXA9P31269 UMOD-203ENST00000396138 2399 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
HOXA9P31269 GOLGA6L10-207ENST00000610657 1705 ntAPPRIS P2 TSL 2 BASIC18.65■□□□□ 0.58
HOXA9P31269 POLD3-203ENST00000527458 2122 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
HOXA9P31269 AOC3-204ENST00000591562 2522 ntTSL 2 BASIC18.65■□□□□ 0.58
HOXA9P31269 ZNF517-202ENST00000525105 1383 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
HOXA9P31269 PSMC3IP-204ENST00000587209 1381 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
HOXA9P31269 EWSR1-208ENST00000414183 2189 ntAPPRIS P4 TSL 2 BASIC18.65■□□□□ 0.58
HOXA9P31269 YTHDC2-207ENST00000515883 2629 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
HOXA9P31269 AP001351.1-201ENST00000501397 1865 ntTSL 2 BASIC18.65■□□□□ 0.58
HOXA9P31269 SEPT4-201ENST00000317256 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.58
HOXA9P31269 LRRC43-201ENST00000339777 2028 ntAPPRIS P2 TSL 5 BASIC18.64■□□□□ 0.58
HOXA9P31269 TNXA-203ENST00000507684 2038 ntBASIC18.64■□□□□ 0.58
HOXA9P31269 ARHGAP5-203ENST00000396582 5786 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
HOXA9P31269 LRRC14-201ENST00000292524 5328 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
HOXA9P31269 TP53I3-202ENST00000335934 1635 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
HOXA9P31269 INO80E-207ENST00000563197 2103 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
HOXA9P31269 FIP1L1-202ENST00000337488 2198 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
HOXA9P31269 PSTK-201ENST00000368887 1705 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.57
HOXA9P31269 ANKRD24-201ENST00000262970 3711 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.57
HOXA9P31269 RAMP1-201ENST00000254661 910 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
HOXA9P31269 COX5BP2-201ENST00000392354 334 ntBASIC18.64■□□□□ 0.57
HOXA9P31269 SPDYE21P-201ENST00000413323 827 ntBASIC18.64■□□□□ 0.57
HOXA9P31269 UPF3AP3-201ENST00000420996 769 ntBASIC18.64■□□□□ 0.57
HOXA9P31269 C21orf33-205ENST00000427803 1077 ntTSL 2 BASIC18.64■□□□□ 0.57
HOXA9P31269 MIR503HG-203ENST00000441492 649 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
HOXA9P31269 BX005266.1-201ENST00000473402 457 ntBASIC18.64■□□□□ 0.57
HOXA9P31269 FAM172A-207ENST00000509739 1031 ntTSL 2 BASIC18.64■□□□□ 0.57
HOXA9P31269 RNA5SP416-201ENST00000516838 111 ntBASIC18.64■□□□□ 0.57
HOXA9P31269 SPCS2-202ENST00000526361 772 ntTSL 2 BASIC18.64■□□□□ 0.57
HOXA9P31269 SNHG15-206ENST00000580528 1073 ntTSL 2 BASIC18.64■□□□□ 0.57
HOXA9P31269 CYGB-205ENST00000590175 830 ntTSL 3 BASIC18.64■□□□□ 0.57
HOXA9P31269 SMIM22-210ENST00000615471 928 ntAPPRIS ALT2 TSL 3 BASIC18.64■□□□□ 0.57
HOXA9P31269 MIR1199-201ENST00000621445 119 ntBASIC18.64■□□□□ 0.57
HOXA9P31269 ARHGAP22-203ENST00000374172 2380 ntTSL 2 BASIC18.64■□□□□ 0.57
HOXA9P31269 HSP90B1-210ENST00000614327 1338 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
HOXA9P31269 CYP4F8-210ENST00000612078 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
HOXA9P31269 CDK17-203ENST00000543119 2442 ntTSL 2 BASIC18.64■□□□□ 0.57
HOXA9P31269 PCDHGB3-202ENST00000618934 2445 ntAPPRIS P1 BASIC18.64■□□□□ 0.57
HOXA9P31269 COL9A3-201ENST00000343916 2485 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
HOXA9P31269 KRT8P47-201ENST00000604727 1398 ntBASIC18.64■□□□□ 0.57
HOXA9P31269 MOV10L1-203ENST00000395852 1422 ntTSL 2 BASIC18.64■□□□□ 0.57
HOXA9P31269 CLDN15-208ENST00000611078 1509 ntTSL 5 BASIC18.64■□□□□ 0.57
HOXA9P31269 HMGA1-205ENST00000447654 2159 ntAPPRIS P4 TSL 1 (best) BASIC18.64■□□□□ 0.57
HOXA9P31269 AP001476.1-201ENST00000451618 2198 ntTSL 2 BASIC18.64■□□□□ 0.57
HOXA9P31269 GRK2-201ENST00000308595 3466 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
HOXA9P31269 ENTPD8-202ENST00000371506 2222 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
HOXA9P31269 STMN4-202ENST00000350889 2288 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
HOXA9P31269 MXD3-202ENST00000427908 2269 ntTSL 2 BASIC18.63■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 30.9 ms