Protein–RNA interactions for Protein: P29279

CTGF, Connective tissue growth factor, humanhuman

Predictions only

Length 349 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTGFP29279 NMRK2-201ENST00000168977 1126 ntAPPRIS P3 TSL 2 BASIC20.19■□□□□ 0.82
CTGFP29279 UBXN1-201ENST00000294119 1291 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
CTGFP29279 HMGN4-201ENST00000377575 1225 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
CTGFP29279 CD99-202ENST00000381180 530 ntTSL 2 BASIC20.19■□□□□ 0.82
CTGFP29279 LINC00029-202ENST00000414668 1117 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
CTGFP29279 IRF3-204ENST00000442265 315 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
CTGFP29279 FAM153C-206ENST00000507848 1071 ntAPPRIS ALT2 TSL 2 BASIC20.19■□□□□ 0.82
CTGFP29279 AP000344.2-201ENST00000512987 629 ntBASIC20.19■□□□□ 0.82
CTGFP29279 SFTPC-210ENST00000524255 681 ntTSL 2 BASIC20.19■□□□□ 0.82
CTGFP29279 CCND1-203ENST00000536559 553 ntTSL 3 BASIC20.19■□□□□ 0.82
CTGFP29279 AC004801.5-202ENST00000546804 530 ntTSL 4 BASIC20.19■□□□□ 0.82
CTGFP29279 AC087741.1-203ENST00000576824 820 ntTSL 3 BASIC20.19■□□□□ 0.82
CTGFP29279 AC004408.1-201ENST00000579256 573 ntTSL 4 BASIC20.19■□□□□ 0.82
CTGFP29279 AC005498.2-205ENST00000593218 784 ntBASIC20.19■□□□□ 0.82
CTGFP29279 NMRK2-205ENST00000616156 1139 ntAPPRIS ALT2 TSL 5 BASIC20.19■□□□□ 0.82
CTGFP29279 SEPT2-203ENST00000391971 3315 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
CTGFP29279 TULP1-201ENST00000229771 2162 ntAPPRIS P2 TSL 1 (best) BASIC20.19■□□□□ 0.82
CTGFP29279 PUDP-203ENST00000424830 1334 ntTSL 3 BASIC20.19■□□□□ 0.82
CTGFP29279 BCAR1-209ENST00000546196 1340 ntBASIC20.19■□□□□ 0.82
CTGFP29279 C11orf80-214ENST00000532565 1948 ntAPPRIS ALT2 TSL 5 BASIC20.19■□□□□ 0.82
CTGFP29279 NEU4-202ENST00000391969 2526 ntAPPRIS P1 TSL 2 BASIC20.19■□□□□ 0.82
CTGFP29279 TMEM250-205ENST00000561457 2804 ntAPPRIS P1 TSL 2 BASIC20.19■□□□□ 0.82
CTGFP29279 WDR61-201ENST00000267973 1387 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
CTGFP29279 NABP2-201ENST00000267023 1417 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
CTGFP29279 FGFR2-208ENST00000360144 3001 ntTSL 2 BASIC20.19■□□□□ 0.82
CTGFP29279 AFG3L1P-217ENST00000557444 2447 ntBASIC20.18■□□□□ 0.82
CTGFP29279 FGF14-IT1-202ENST00000607251 2123 ntTSL 2 BASIC20.18■□□□□ 0.82
CTGFP29279 ASZ1-201ENST00000284629 1865 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
CTGFP29279 GTF2IRD2-207ENST00000625377 1910 ntTSL 5 BASIC20.18■□□□□ 0.82
CTGFP29279 SIMC1-203ENST00000429602 2694 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
CTGFP29279 C22orf39-201ENST00000333059 1221 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
CTGFP29279 GPX7-201ENST00000361314 1228 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
CTGFP29279 THAP7-202ENST00000399133 1144 ntAPPRIS P1 TSL 2 BASIC20.18■□□□□ 0.82
CTGFP29279 NKTR-203ENST00000442970 646 ntTSL 2 BASIC20.18■□□□□ 0.82
CTGFP29279 IFT20-209ENST00000579419 787 ntAPPRIS ALT1 TSL 3 BASIC20.18■□□□□ 0.82
CTGFP29279 INO80C-206ENST00000586489 594 ntTSL 3 BASIC20.18■□□□□ 0.82
CTGFP29279 AC016168.1-201ENST00000591422 722 ntTSL 3 BASIC20.18■□□□□ 0.82
CTGFP29279 SLC9A3-AS1-205ENST00000606319 477 ntTSL 3 BASIC20.18■□□□□ 0.82
CTGFP29279 TMEM109-201ENST00000227525 2413 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
CTGFP29279 NARS2-201ENST00000281038 2519 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
CTGFP29279 TPSAB1-202ENST00000461509 1357 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
CTGFP29279 AP001476.1-201ENST00000451618 2198 ntTSL 2 BASIC20.18■□□□□ 0.82
CTGFP29279 FHL1-219ENST00000618438 2178 ntTSL 3 BASIC20.18■□□□□ 0.82
CTGFP29279 SAMD11-216ENST00000620200 1874 ntTSL 5 BASIC20.18■□□□□ 0.82
CTGFP29279 AL049757.1-201ENST00000616842 1596 ntBASIC20.17■□□□□ 0.82
CTGFP29279 NAF1-202ENST00000422287 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
CTGFP29279 DHRS2-201ENST00000250383 1705 ntAPPRIS P3 TSL 1 (best) BASIC20.17■□□□□ 0.82
CTGFP29279 CA4-201ENST00000300900 1154 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
CTGFP29279 CTRB2-201ENST00000303037 901 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
CTGFP29279 NUPR2-201ENST00000329309 603 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
CTGFP29279 ARHGAP11B-201ENST00000428041 1017 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
CTGFP29279 PAWRP1-201ENST00000451083 565 ntBASIC20.17■□□□□ 0.82
CTGFP29279 ADA-207ENST00000537820 1128 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
CTGFP29279 AC096734.2-201ENST00000562054 433 ntBASIC20.17■□□□□ 0.82
CTGFP29279 AC004771.3-201ENST00000574260 551 ntTSL 4 BASIC20.17■□□□□ 0.82
CTGFP29279 AC138761.1-201ENST00000584393 385 ntBASIC20.17■□□□□ 0.82
CTGFP29279 AL513210.1-201ENST00000629608 234 ntBASIC20.17■□□□□ 0.82
CTGFP29279 FAM193A-211ENST00000637812 4885 ntAPPRIS ALT2 TSL 5 BASIC20.17■□□□□ 0.82
CTGFP29279 NUDC-201ENST00000321265 1800 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
CTGFP29279 COPS7A-210ENST00000539735 1832 ntAPPRIS P1 TSL 5 BASIC20.17■□□□□ 0.82
CTGFP29279 COMT-202ENST00000361682 2437 ntAPPRIS P3 TSL 1 (best) BASIC20.17■□□□□ 0.82
CTGFP29279 EPS8L1-201ENST00000201647 2536 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
CTGFP29279 TUBA3FP-202ENST00000422086 1974 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
CTGFP29279 NCF1C-201ENST00000438382 1427 ntBASIC20.17■□□□□ 0.82
CTGFP29279 EPDR1-201ENST00000199448 2599 ntAPPRIS P3 TSL 1 (best) BASIC20.17■□□□□ 0.82
CTGFP29279 LAYN-203ENST00000436913 2590 ntTSL 2 BASIC20.17■□□□□ 0.82
CTGFP29279 CHGA-202ENST00000334654 1474 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
CTGFP29279 AC243965.2-201ENST00000612576 2671 ntTSL 5 BASIC20.17■□□□□ 0.82
CTGFP29279 RASL11A-201ENST00000241463 1543 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
CTGFP29279 GPAT2P1-202ENST00000471661 1569 ntTSL 2 BASIC20.17■□□□□ 0.82
CTGFP29279 JMJD6-202ENST00000397625 1603 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
CTGFP29279 CYP2D6-203ENST00000360608 1684 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
CTGFP29279 CCT5-205ENST00000506600 1939 ntTSL 2 BASIC20.16■□□□□ 0.82
CTGFP29279 C11orf58-201ENST00000228136 2049 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
CTGFP29279 LGALS7B-201ENST00000314980 483 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
CTGFP29279 CKLF-204ENST00000362093 412 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
CTGFP29279 COX5BP2-201ENST00000392354 334 ntBASIC20.16■□□□□ 0.82
CTGFP29279 AC004461.1-201ENST00000412461 403 ntBASIC20.16■□□□□ 0.82
CTGFP29279 AC103564.2-201ENST00000432853 1299 ntBASIC20.16■□□□□ 0.82
CTGFP29279 AL391650.1-205ENST00000433939 579 ntAPPRIS P1 TSL 3 BASIC20.16■□□□□ 0.82
CTGFP29279 RHOQP3-201ENST00000437982 621 ntBASIC20.16■□□□□ 0.82
CTGFP29279 HLA-J-203ENST00000494367 1087 ntBASIC20.16■□□□□ 0.82
CTGFP29279 AC109322.1-201ENST00000524499 1264 ntBASIC20.16■□□□□ 0.82
CTGFP29279 WDR25-203ENST00000542471 1214 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
CTGFP29279 GREM1-201ENST00000560677 623 ntTSL 4 BASIC20.16■□□□□ 0.82
CTGFP29279 AC108449.3-201ENST00000560714 585 ntTSL 3 BASIC20.16■□□□□ 0.82
CTGFP29279 PRR29-209ENST00000582540 967 ntTSL 2 BASIC20.16■□□□□ 0.82
CTGFP29279 AC010654.1-201ENST00000615722 808 ntBASIC20.16■□□□□ 0.82
CTGFP29279 AR-204ENST00000504326 3615 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
CTGFP29279 BDKRB2-201ENST00000539359 1600 ntTSL 2 BASIC20.16■□□□□ 0.82
CTGFP29279 ESPN-205ENST00000461727 1869 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
CTGFP29279 AC027097.1-202ENST00000592201 1954 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
CTGFP29279 CBX1-201ENST00000225603 2232 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
CTGFP29279 CLIC1-208ENST00000375784 1254 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
CTGFP29279 AMACR-204ENST00000382085 1195 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
CTGFP29279 TIMM17B-202ENST00000396779 1099 ntTSL 5 BASIC20.15■□□□□ 0.82
CTGFP29279 LINC01481-203ENST00000549651 883 ntTSL 2 BASIC20.15■□□□□ 0.82
CTGFP29279 AC091812.2-201ENST00000619081 385 ntBASIC20.15■□□□□ 0.82
CTGFP29279 AC092902.6-201ENST00000641783 218 ntBASIC20.15■□□□□ 0.82
CTGFP29279 ZFPL1-201ENST00000294258 1371 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 53.8 ms