Protein–RNA interactions for Protein: P26045

PTPN3, Tyrosine-protein phosphatase non-receptor type 3, humanhuman

Predictions only

Length 913 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN3P26045 GGT1-205ENST00000403838 1033 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
PTPN3P26045 IFI27L2-206ENST00000556727 556 ntTSL 3 BASIC18.37■□□□□ 0.53
PTPN3P26045 AC126696.3-202ENST00000570159 553 ntTSL 5 BASIC18.37■□□□□ 0.53
PTPN3P26045 PSMD8-202ENST00000585598 541 ntTSL 5 BASIC18.37■□□□□ 0.53
PTPN3P26045 CLN3-259ENST00000637551 1083 ntTSL 5 BASIC18.37■□□□□ 0.53
PTPN3P26045 TRIM36-202ENST00000379617 1322 ntTSL 2 BASIC18.37■□□□□ 0.53
PTPN3P26045 CAB39-203ENST00000410084 1324 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
PTPN3P26045 AC022898.2-201ENST00000616822 1312 ntBASIC18.37■□□□□ 0.53
PTPN3P26045 SCARB1-203ENST00000415380 2731 ntTSL 2 BASIC18.37■□□□□ 0.53
PTPN3P26045 RNF113B-201ENST00000267291 1376 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
PTPN3P26045 KIF25-AS1-201ENST00000414364 1420 ntTSL 2 BASIC18.37■□□□□ 0.53
PTPN3P26045 P2RY6-207ENST00000538328 1425 ntAPPRIS P1 TSL 3 BASIC18.37■□□□□ 0.53
PTPN3P26045 LINC01311-201ENST00000565162 1445 ntBASIC18.37■□□□□ 0.53
PTPN3P26045 MACF1-233ENST00000602421 1423 ntTSL 2 BASIC18.37■□□□□ 0.53
PTPN3P26045 TRIM13-206ENST00000457662 1489 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
PTPN3P26045 HERPUD2-202ENST00000396081 3057 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
PTPN3P26045 THNSL2-205ENST00000449349 1616 ntTSL 5 BASIC18.37■□□□□ 0.53
PTPN3P26045 DCAF8-218ENST00000610139 1607 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
PTPN3P26045 AP005717.1-201ENST00000500705 1899 ntTSL 5 BASIC18.37■□□□□ 0.53
PTPN3P26045 GFY-201ENST00000576655 1876 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
PTPN3P26045 PABPC1L-217ENST00000537323 1910 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
PTPN3P26045 AC068446.2-201ENST00000500487 2165 ntTSL 2 BASIC18.37■□□□□ 0.53
PTPN3P26045 NOMO2-201ENST00000330537 4352 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
PTPN3P26045 NEXN-AS1-201ENST00000421331 2292 ntTSL 2 BASIC18.37■□□□□ 0.53
PTPN3P26045 ZNF346-208ENST00000511834 2306 ntTSL 5 BASIC18.37■□□□□ 0.53
PTPN3P26045 APMAP-201ENST00000217456 2430 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
PTPN3P26045 NOS1AP-206ENST00000530878 2894 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
PTPN3P26045 CRMP1-202ENST00000397890 2911 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
PTPN3P26045 PGM5-202ENST00000396396 3338 ntAPPRIS P1 TSL 2 BASIC18.36■□□□□ 0.53
PTPN3P26045 PLEKHG5-212ENST00000537245 4794 ntAPPRIS ALT2 TSL 2 BASIC18.36■□□□□ 0.53
PTPN3P26045 TSKS-201ENST00000246801 1883 ntAPPRIS P2 TSL 1 (best) BASIC18.36■□□□□ 0.53
PTPN3P26045 RHEBL1-201ENST00000301068 1210 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
PTPN3P26045 ANKRD6-201ENST00000339746 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC18.36■□□□□ 0.53
PTPN3P26045 LINC00311-201ENST00000366314 1566 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
PTPN3P26045 MRPL24-202ENST00000368211 883 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
PTPN3P26045 IGHGP-201ENST00000390555 1178 ntBASIC18.36■□□□□ 0.53
PTPN3P26045 QPRT-202ENST00000395384 2343 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
PTPN3P26045 SULT1A1-204ENST00000395609 1871 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
PTPN3P26045 ALAS2-203ENST00000396198 1936 ntTSL 5 BASIC18.36■□□□□ 0.53
PTPN3P26045 NR2C2-206ENST00000425241 2494 ntAPPRIS P1 TSL 2 BASIC18.36■□□□□ 0.53
PTPN3P26045 APEH-202ENST00000438011 2249 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
PTPN3P26045 KRT18P65-201ENST00000439811 1286 ntBASIC18.36■□□□□ 0.53
PTPN3P26045 SPDYE13P-201ENST00000445314 798 ntBASIC18.36■□□□□ 0.53
PTPN3P26045 PTPA-223ENST00000452489 2526 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
PTPN3P26045 LBX1-AS1-203ENST00000454527 740 ntTSL 5 BASIC18.36■□□□□ 0.53
PTPN3P26045 LY6E-213ENST00000522528 606 ntTSL 3 BASIC18.36■□□□□ 0.53
PTPN3P26045 PPOX-214ENST00000535223 664 ntTSL 3 BASIC18.36■□□□□ 0.53
PTPN3P26045 LTBR-211ENST00000543190 785 ntTSL 3 BASIC18.36■□□□□ 0.53
PTPN3P26045 ZNF500-202ENST00000545009 2440 ntTSL 2 BASIC18.36■□□□□ 0.53
PTPN3P26045 MRPL52-215ENST00000556840 398 ntTSL 2 BASIC18.36■□□□□ 0.53
PTPN3P26045 ZNF444P1-201ENST00000559497 298 ntBASIC18.36■□□□□ 0.53
PTPN3P26045 EIF2AK4-209ENST00000560648 687 ntTSL 3 BASIC18.36■□□□□ 0.53
PTPN3P26045 CLDN7-204ENST00000571881 735 ntTSL 3 BASIC18.36■□□□□ 0.53
PTPN3P26045 LETM1P2-201ENST00000597330 2178 ntBASIC18.36■□□□□ 0.53
PTPN3P26045 MAGEA3-203ENST00000598245 1762 ntAPPRIS P1 TSL 2 BASIC18.36■□□□□ 0.53
PTPN3P26045 AC083849.1-201ENST00000615227 514 ntBASIC18.36■□□□□ 0.53
PTPN3P26045 MAGEA6-204ENST00000616035 1762 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
PTPN3P26045 AC064853.5-201ENST00000641976 258 ntAPPRIS P1 BASIC18.36■□□□□ 0.53
PTPN3P26045 CCDC91-220ENST00000545336 2738 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
PTPN3P26045 ISLR2-201ENST00000361742 4817 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
PTPN3P26045 A4GALT-203ENST00000401850 2321 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
PTPN3P26045 ZNF454-202ENST00000519564 2142 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
PTPN3P26045 C18orf8-208ENST00000590868 2002 ntTSL 2 BASIC18.35■□□□□ 0.53
PTPN3P26045 TMEM216-203ENST00000515837 1958 ntAPPRIS P2 TSL 2 BASIC18.35■□□□□ 0.53
PTPN3P26045 CSK-202ENST00000439220 1900 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
PTPN3P26045 MPP5-201ENST00000261681 5552 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
PTPN3P26045 SLC22A7-201ENST00000372574 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
PTPN3P26045 FYTTD1-205ENST00000424384 1758 ntTSL 2 BASIC18.35■□□□□ 0.53
PTPN3P26045 FBXL3-201ENST00000355619 3503 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
PTPN3P26045 PYCR1-217ENST00000629768 1740 ntTSL 5 BASIC18.35■□□□□ 0.53
PTPN3P26045 MAP6-201ENST00000304771 3334 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
PTPN3P26045 AC004832.3-202ENST00000439838 1470 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
PTPN3P26045 XXYLT1-201ENST00000310380 2727 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
PTPN3P26045 SMIM24-201ENST00000215531 1329 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
PTPN3P26045 NTMT1-211ENST00000617943 1346 ntTSL 3 BASIC18.35■□□□□ 0.53
PTPN3P26045 GPRC5B-201ENST00000300571 5213 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
PTPN3P26045 ZNF211-203ENST00000299871 2577 ntAPPRIS ALT2 TSL 3 BASIC18.35■□□□□ 0.53
PTPN3P26045 RAB4B-EGLN2-201ENST00000594136 2554 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
PTPN3P26045 DGCR6-201ENST00000331444 1214 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
PTPN3P26045 PAX3-208ENST00000409828 1254 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
PTPN3P26045 AP003733.1-201ENST00000491725 852 ntBASIC18.35■□□□□ 0.53
PTPN3P26045 AC091133.2-201ENST00000505903 428 ntTSL 3 BASIC18.35■□□□□ 0.53
PTPN3P26045 AC116353.4-201ENST00000507279 576 ntTSL 4 BASIC18.35■□□□□ 0.53
PTPN3P26045 LIMD2-211ENST00000583211 1298 ntTSL 3 BASIC18.35■□□□□ 0.53
PTPN3P26045 MIR2117HG-201ENST00000588060 506 ntTSL 4 BASIC18.35■□□□□ 0.53
PTPN3P26045 ZDHHC8P1-204ENST00000433168 2309 ntTSL 2 BASIC18.35■□□□□ 0.53
PTPN3P26045 LINC00683-201ENST00000578803 2221 ntTSL 2 BASIC18.35■□□□□ 0.53
PTPN3P26045 GDF7-201ENST00000272224 9749 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
PTPN3P26045 ZNFX1-203ENST00000371754 5235 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
PTPN3P26045 NEU1-206ENST00000375631 2045 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
PTPN3P26045 AL109910.2-201ENST00000607733 1953 ntTSL 2 BASIC18.35■□□□□ 0.53
PTPN3P26045 MAEA-219ENST00000514708 1945 ntTSL 2 BASIC18.35■□□□□ 0.53
PTPN3P26045 MSL1-202ENST00000398532 4707 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
PTPN3P26045 TCTN1-204ENST00000397659 1885 ntAPPRIS P4 TSL 1 (best) BASIC18.35■□□□□ 0.53
PTPN3P26045 ZNF274-202ENST00000345813 2678 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
PTPN3P26045 FAM157B-201ENST00000446912 1795 ntTSL 2 BASIC18.35■□□□□ 0.53
PTPN3P26045 GOLGA2P7-201ENST00000316967 2525 ntTSL 2 BASIC18.34■□□□□ 0.53
PTPN3P26045 LZTS1-203ENST00000522290 1614 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
PTPN3P26045 SLC12A4-201ENST00000316341 4765 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
PTPN3P26045 ARPC1B-201ENST00000252725 1551 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 41.3 ms