Protein–RNA interactions for Protein: P18206

VCL, Vinculin, humanhuman

Predictions only

Length 1,134 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VCLP18206 C1QTNF1-209ENST00000581774 1368 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
VCLP18206 MIB2-201ENST00000355826 3290 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
VCLP18206 KANK1-204ENST00000382293 5249 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
VCLP18206 PTTG1IP-203ENST00000397887 2413 ntTSL 4 BASIC18.12■□□□□ 0.49
VCLP18206 ATP2A3-201ENST00000309890 4826 ntTSL 5 BASIC18.12■□□□□ 0.49
VCLP18206 POFUT2-201ENST00000331343 4825 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
VCLP18206 WRB-201ENST00000333781 1616 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
VCLP18206 EML2-203ENST00000536630 2791 ntAPPRIS ALT2 TSL 2 BASIC18.12■□□□□ 0.49
VCLP18206 GRB7-202ENST00000394204 1667 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
VCLP18206 NOMO3-201ENST00000263012 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
VCLP18206 RNF128-201ENST00000255499 2817 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
VCLP18206 AC133785.1-201ENST00000429282 2824 ntTSL 2 BASIC18.12■□□□□ 0.49
VCLP18206 CD1E-205ENST00000368160 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
VCLP18206 SLC26A11-212ENST00000572725 1862 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
VCLP18206 PFDN6-206ENST00000463584 1915 ntTSL 3 BASIC18.11■□□□□ 0.49
VCLP18206 ALDOC-201ENST00000226253 1982 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
VCLP18206 AL096870.2-201ENST00000565988 2108 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
VCLP18206 CYP7B1-201ENST00000310193 2202 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
VCLP18206 DTX2-202ENST00000413936 2472 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
VCLP18206 ARFRP1-213ENST00000619493 2456 ntAPPRIS P1 TSL 3 BASIC18.11■□□□□ 0.49
VCLP18206 SBF2-AS1-201ENST00000498905 2709 ntTSL 5 BASIC18.11■□□□□ 0.49
VCLP18206 PXK-206ENST00000463280 2825 ntTSL 2 BASIC18.11■□□□□ 0.49
VCLP18206 UBE3A-201ENST00000232165 5051 ntAPPRIS P3 TSL 5 BASIC18.11■□□□□ 0.49
VCLP18206 E2F2-201ENST00000361729 5191 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
VCLP18206 PARP12-201ENST00000263549 3796 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
VCLP18206 MADCAM1-203ENST00000382683 603 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
VCLP18206 SMYD3-204ENST00000403792 1209 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
VCLP18206 PLPP5-202ENST00000422581 853 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
VCLP18206 GRP-204ENST00000529320 824 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
VCLP18206 CD320-202ENST00000537716 1119 ntTSL 2 BASIC18.11■□□□□ 0.49
VCLP18206 AL136038.4-201ENST00000603606 1261 ntBASIC18.11■□□□□ 0.49
VCLP18206 DHRS2-210ENST00000611765 1287 ntAPPRIS ALT2 TSL 2 BASIC18.11■□□□□ 0.49
VCLP18206 SMIM29-209ENST00000636500 1186 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
VCLP18206 ZFYVE21-202ENST00000311141 1383 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
VCLP18206 AL163051.1-201ENST00000569214 1512 ntBASIC18.11■□□□□ 0.49
VCLP18206 CENPT-215ENST00000564817 1638 ntAPPRIS ALT2 TSL 5 BASIC18.11■□□□□ 0.49
VCLP18206 SUFU-201ENST00000369899 1839 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
VCLP18206 ISG20-201ENST00000306072 1856 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
VCLP18206 CCDC63-202ENST00000545036 1887 ntAPPRIS ALT2 TSL 2 BASIC18.11■□□□□ 0.49
VCLP18206 PRSS23-209ENST00000533902 2043 ntTSL 4 BASIC18.11■□□□□ 0.49
VCLP18206 NRBP1-204ENST00000379863 2174 ntTSL 5 BASIC18.11■□□□□ 0.49
VCLP18206 SEPHS1-202ENST00000378614 2387 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
VCLP18206 C3orf18-201ENST00000357203 2655 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
VCLP18206 TMEM183A-201ENST00000367242 3019 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
VCLP18206 XXYLT1-201ENST00000310380 2727 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
VCLP18206 KANSL2-212ENST00000550347 2714 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
VCLP18206 TNRC18P3-201ENST00000441896 2691 ntBASIC18.1■□□□□ 0.49
VCLP18206 C6orf47-202ENST00000375911 2475 ntAPPRIS P1 BASIC18.1■□□□□ 0.49
VCLP18206 TTC3-203ENST00000399010 2115 ntTSL 5 BASIC18.1■□□□□ 0.49
VCLP18206 SSUH2-202ENST00000341795 1799 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
VCLP18206 OSMR-202ENST00000502536 1740 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
VCLP18206 ZNF114-206ENST00000600687 1742 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
VCLP18206 SRP9-203ENST00000366839 1596 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
VCLP18206 MIR4300HG-201ENST00000500502 1397 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
VCLP18206 NDUFB9-206ENST00000522532 1319 ntTSL 2 BASIC18.1■□□□□ 0.49
VCLP18206 SRRM2-AS1-203ENST00000571305 1344 ntTSL 2 BASIC18.1■□□□□ 0.49
VCLP18206 TNNC1-201ENST00000232975 714 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
VCLP18206 HBZP1-201ENST00000354915 429 ntBASIC18.1■□□□□ 0.49
VCLP18206 EEF1D-202ENST00000395119 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
VCLP18206 PVRIG2P-201ENST00000435460 978 ntBASIC18.1■□□□□ 0.49
VCLP18206 RPL26L1-205ENST00000519974 695 ntAPPRIS P1 TSL 3 BASIC18.1■□□□□ 0.49
VCLP18206 AP006284.1-202ENST00000527113 527 ntTSL 4 BASIC18.1■□□□□ 0.49
VCLP18206 AC091076.1-201ENST00000610741 619 ntBASIC18.1■□□□□ 0.49
VCLP18206 RNASET2-213ENST00000611959 1124 ntTSL 5 BASIC18.1■□□□□ 0.49
VCLP18206 GJA3-201ENST00000241125 5211 ntAPPRIS P1 TSL 3 BASIC18.1■□□□□ 0.49
VCLP18206 PPP1R18-201ENST00000274853 4599 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
VCLP18206 PPP1R18-205ENST00000615527 4597 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
VCLP18206 PTPDC1-202ENST00000375360 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
VCLP18206 NPBWR1-201ENST00000331251 2687 ntAPPRIS P1 BASIC18.1■□□□□ 0.49
VCLP18206 SYNE3-202ENST00000553340 2615 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
VCLP18206 RSBN1-205ENST00000615321 2418 ntTSL 2 BASIC18.1■□□□□ 0.49
VCLP18206 MYC-207ENST00000621592 2366 ntAPPRIS ALT1 TSL 1 (best) BASIC18.1■□□□□ 0.49
VCLP18206 ST6GALNAC6-201ENST00000291839 2280 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
VCLP18206 SERPINH1-215ENST00000533603 2299 ntAPPRIS P1 TSL 2 BASIC18.1■□□□□ 0.49
VCLP18206 EEF1D-205ENST00000442189 2207 ntAPPRIS P4 TSL 1 (best) BASIC18.1■□□□□ 0.49
VCLP18206 ADRA1A-205ENST00000380582 2089 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
VCLP18206 CTNNBL1-204ENST00000405275 2076 ntTSL 5 BASIC18.1■□□□□ 0.49
VCLP18206 INPP4A-204ENST00000409540 3231 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
VCLP18206 PRRT1-201ENST00000211413 1909 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
VCLP18206 EDC3-214ENST00000568176 1825 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
VCLP18206 TBXA2R-204ENST00000589966 1814 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
VCLP18206 NSFL1C-206ENST00000476071 2800 ntTSL 5 BASIC18.09■□□□□ 0.49
VCLP18206 FAM222A-201ENST00000358906 2731 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
VCLP18206 SKOR1-202ENST00000380035 3675 ntAPPRIS ALT2 TSL 5 BASIC18.09■□□□□ 0.49
VCLP18206 AC020661.1-201ENST00000503052 1584 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
VCLP18206 ADGRG2-208ENST00000379873 4698 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
VCLP18206 ZNF22-201ENST00000298299 2551 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
VCLP18206 STEAP1B-201ENST00000404369 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
VCLP18206 STARD7-AS1-202ENST00000446816 1527 ntTSL 2 BASIC18.09■□□□□ 0.49
VCLP18206 GAL3ST4-201ENST00000360039 2537 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
VCLP18206 CDK11B-208ENST00000629289 2490 ntTSL 5 BASIC18.09■□□□□ 0.49
VCLP18206 CDK11B-209ENST00000629312 2496 ntTSL 5 BASIC18.09■□□□□ 0.49
VCLP18206 LUC7L-201ENST00000293872 1456 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
VCLP18206 AC124067.4-201ENST00000519691 2379 ntBASIC18.09■□□□□ 0.49
VCLP18206 BSCL2-201ENST00000278893 1364 ntAPPRIS ALT2 TSL 2 BASIC18.09■□□□□ 0.49
VCLP18206 ZACN-201ENST00000334586 1335 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
VCLP18206 NEK2-205ENST00000540251 1318 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
VCLP18206 SNCG-201ENST00000348795 684 ntTSL 2 BASIC18.09■□□□□ 0.49
VCLP18206 ICAM4-202ENST00000380770 1211 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
VCLP18206 MIR149-201ENST00000384879 89 ntBASIC18.09■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 57.2 ms