Protein–RNA interactions for Protein: P17405

SMPD1, Sphingomyelin phosphodiesterase, humanhuman

Predictions only

Length 629 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1P17405 GCDH-216ENST00000591470 1867 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
SMPD1P17405 FGF14-IT1-202ENST00000607251 2123 ntTSL 2 BASIC19.94■□□□□ 0.78
SMPD1P17405 RPL13P5-202ENST00000412023 1438 ntTSL 2 BASIC19.94■□□□□ 0.78
SMPD1P17405 SIGLEC16-201ENST00000599858 1437 ntBASIC19.94■□□□□ 0.78
SMPD1P17405 CROCCP3-202ENST00000420820 1947 ntBASIC19.94■□□□□ 0.78
SMPD1P17405 PCBP3-206ENST00000400314 2202 ntAPPRIS P2 TSL 5 BASIC19.94■□□□□ 0.78
SMPD1P17405 SMIM10L2A-201ENST00000417443 5230 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
SMPD1P17405 CXXC1-202ENST00000412036 2280 ntAPPRIS ALT1 TSL 1 (best) BASIC19.94■□□□□ 0.78
SMPD1P17405 FAM49B-214ENST00000519540 2021 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
SMPD1P17405 USP36-203ENST00000542802 6063 ntAPPRIS P2 TSL 1 (best) BASIC19.94■□□□□ 0.78
SMPD1P17405 MOSPD3-201ENST00000223054 1053 ntAPPRIS P1 TSL 2 BASIC19.94■□□□□ 0.78
SMPD1P17405 GSTZ1-202ENST00000349555 867 ntTSL 2 BASIC19.94■□□□□ 0.78
SMPD1P17405 COX5BP2-201ENST00000392354 334 ntBASIC19.94■□□□□ 0.78
SMPD1P17405 CHMP3-203ENST00000409225 1099 ntTSL 2 BASIC19.94■□□□□ 0.78
SMPD1P17405 AC134772.1-202ENST00000435578 549 ntTSL 4 BASIC19.94■□□□□ 0.78
SMPD1P17405 AC112482.1-201ENST00000492080 688 ntBASIC19.94■□□□□ 0.78
SMPD1P17405 MRNIP-205ENST00000518235 1244 ntAPPRIS ALT2 TSL 2 BASIC19.94■□□□□ 0.78
SMPD1P17405 AC040169.1-201ENST00000565382 521 ntBASIC19.94■□□□□ 0.78
SMPD1P17405 AC127496.4-201ENST00000571591 549 ntTSL 4 BASIC19.94■□□□□ 0.78
SMPD1P17405 FBF1-204ENST00000586631 621 ntAPPRIS ALT2 TSL 2 BASIC19.94■□□□□ 0.78
SMPD1P17405 NPAS4-204ENST00000639555 878 ntTSL 5 BASIC19.94■□□□□ 0.78
SMPD1P17405 MLX-201ENST00000246912 2586 ntAPPRIS P3 TSL 1 (best) BASIC19.94■□□□□ 0.78
SMPD1P17405 CDK18-217ENST00000506784 2143 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
SMPD1P17405 CCDC27-201ENST00000294600 2176 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
SMPD1P17405 AK3-202ENST00000381809 2736 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
SMPD1P17405 HFE2-204ENST00000475797 1381 ntTSL 2 BASIC19.94■□□□□ 0.78
SMPD1P17405 HMCES-201ENST00000383463 2515 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
SMPD1P17405 NKX1-2-201ENST00000451024 3364 ntAPPRIS P1 TSL 5 BASIC19.94■□□□□ 0.78
SMPD1P17405 AC008687.8-201ENST00000599795 1748 ntAPPRIS P1 TSL 2 BASIC19.93■□□□□ 0.78
SMPD1P17405 TMEFF1-201ENST00000374879 2611 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
SMPD1P17405 FCER2-202ENST00000360067 1482 ntAPPRIS ALT2 TSL 5 BASIC19.93■□□□□ 0.78
SMPD1P17405 MARK2-204ENST00000402010 4728 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
SMPD1P17405 KLHL23-201ENST00000272797 2087 ntAPPRIS P1 TSL 2 BASIC19.93■□□□□ 0.78
SMPD1P17405 TWF1-201ENST00000395510 3045 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
SMPD1P17405 CHAC1-202ENST00000446533 1849 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
SMPD1P17405 DMRT3-201ENST00000190165 2183 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
SMPD1P17405 PRR14-202ENST00000300835 2198 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
SMPD1P17405 NOTCH2NL-201ENST00000362074 1874 ntAPPRIS P2 TSL 1 (best) BASIC19.93■□□□□ 0.78
SMPD1P17405 ACP6-201ENST00000392988 1555 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
SMPD1P17405 AL355310.2-201ENST00000369843 688 ntTSL 3 BASIC19.93■□□□□ 0.78
SMPD1P17405 LINC01705-201ENST00000438158 562 ntTSL 2 BASIC19.93■□□□□ 0.78
SMPD1P17405 AC097532.1-201ENST00000440802 322 ntTSL 2 BASIC19.93■□□□□ 0.78
SMPD1P17405 RNA5SP416-201ENST00000516838 111 ntBASIC19.93■□□□□ 0.78
SMPD1P17405 SMIM22-210ENST00000615471 928 ntAPPRIS ALT2 TSL 3 BASIC19.93■□□□□ 0.78
SMPD1P17405 AC073592.5-201ENST00000624854 528 ntBASIC19.93■□□□□ 0.78
SMPD1P17405 ACHE-205ENST00000419336 1906 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
SMPD1P17405 FBXL19-207ENST00000565690 2570 ntAPPRIS ALT2 TSL 5 BASIC19.93■□□□□ 0.78
SMPD1P17405 MATN4-205ENST00000537548 1991 ntAPPRIS ALT2 TSL 5 BASIC19.93■□□□□ 0.78
SMPD1P17405 STMN3-202ENST00000540534 2351 ntTSL 2 BASIC19.93■□□□□ 0.78
SMPD1P17405 PTCHD3-202ENST00000622555 1720 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
SMPD1P17405 ETV4-201ENST00000319349 2429 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
SMPD1P17405 SIRPAP1-201ENST00000448467 1770 ntBASIC19.93■□□□□ 0.78
SMPD1P17405 SET-201ENST00000322030 2915 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
SMPD1P17405 ZFP64-206ENST00000371523 2234 ntTSL 2 BASIC19.92■□□□□ 0.78
SMPD1P17405 IFRD2-204ENST00000436390 2275 ntAPPRIS P1 TSL 2 BASIC19.92■□□□□ 0.78
SMPD1P17405 ARMC9-201ENST00000349938 2300 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
SMPD1P17405 AC138969.1-205ENST00000381497 1552 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
SMPD1P17405 GABRB2-206ENST00000520240 2030 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
SMPD1P17405 PDE9A-205ENST00000349112 1616 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
SMPD1P17405 TMEM59-202ENST00000371337 600 ntTSL 2 BASIC19.92■□□□□ 0.78
SMPD1P17405 CRCP-205ENST00000431089 942 ntTSL 2 BASIC19.92■□□□□ 0.78
SMPD1P17405 AC103564.2-201ENST00000432853 1299 ntBASIC19.92■□□□□ 0.78
SMPD1P17405 AL133375.1-201ENST00000500590 980 ntTSL 5 BASIC19.92■□□□□ 0.78
SMPD1P17405 AC027117.2-201ENST00000522768 510 ntTSL 3 BASIC19.92■□□□□ 0.78
SMPD1P17405 PAX9-204ENST00000554201 1289 ntTSL 2 BASIC19.92■□□□□ 0.78
SMPD1P17405 AC006557.2-201ENST00000592985 1240 ntBASIC19.92■□□□□ 0.78
SMPD1P17405 ACYP2-209ENST00000607452 831 ntTSL 2 BASIC19.92■□□□□ 0.78
SMPD1P17405 HOTTIP_1.1-201ENST00000620415 57 ntBASIC19.92■□□□□ 0.78
SMPD1P17405 ZNF114-206ENST00000600687 1742 ntAPPRIS P1 TSL 5 BASIC19.92■□□□□ 0.78
SMPD1P17405 IQCJ-SCHIP1-207ENST00000638749 2633 ntAPPRIS P3 TSL 1 (best) BASIC19.92■□□□□ 0.78
SMPD1P17405 SMAD7-201ENST00000262158 3087 ntAPPRIS P3 TSL 1 (best) BASIC19.92■□□□□ 0.78
SMPD1P17405 DHRS7-212ENST00000611054 1321 ntTSL 5 BASIC19.92■□□□□ 0.78
SMPD1P17405 SIGLEC10-204ENST00000436984 1776 ntTSL 2 BASIC19.92■□□□□ 0.78
SMPD1P17405 ATP9A-202ENST00000338821 8106 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
SMPD1P17405 AC073592.3-201ENST00000625118 1834 ntBASIC19.92■□□□□ 0.78
SMPD1P17405 GIT1-201ENST00000225394 3768 ntAPPRIS P3 TSL 1 (best) BASIC19.92■□□□□ 0.78
SMPD1P17405 CECR2-202ENST00000342247 6178 ntAPPRIS ALT2 TSL 5 BASIC19.92■□□□□ 0.78
SMPD1P17405 ARHGAP5-203ENST00000396582 5786 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
SMPD1P17405 NFATC4-228ENST00000556759 2025 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
SMPD1P17405 LINC00894-202ENST00000425602 1597 ntTSL 2 BASIC19.91■□□□□ 0.78
SMPD1P17405 APBB1-215ENST00000608394 2128 ntTSL 5 BASIC19.91■□□□□ 0.78
SMPD1P17405 APBB1-222ENST00000610474 2147 ntTSL 5 BASIC19.91■□□□□ 0.78
SMPD1P17405 ADM-208ENST00000534464 1640 ntTSL 2 BASIC19.91■□□□□ 0.78
SMPD1P17405 SLC6A9-201ENST00000357730 2168 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
SMPD1P17405 TMPRSS5-201ENST00000299882 2232 ntAPPRIS P3 TSL 1 (best) BASIC19.91■□□□□ 0.78
SMPD1P17405 STX17-212ENST00000534052 2424 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
SMPD1P17405 GRM6-201ENST00000231188 6143 ntAPPRIS P1 TSL 2 BASIC19.91■□□□□ 0.78
SMPD1P17405 AL512785.2-202ENST00000367932 830 ntTSL 4 BASIC19.91■□□□□ 0.78
SMPD1P17405 TSTD1-203ENST00000368024 457 ntTSL 2 BASIC19.91■□□□□ 0.78
SMPD1P17405 PMP22-202ENST00000395936 816 ntTSL 3 BASIC19.91■□□□□ 0.78
SMPD1P17405 GNB2-205ENST00000419828 1285 ntTSL 5 BASIC19.91■□□□□ 0.78
SMPD1P17405 AC091133.2-201ENST00000505903 428 ntTSL 3 BASIC19.91■□□□□ 0.78
SMPD1P17405 AP000442.1-201ENST00000533552 769 ntTSL 5 BASIC19.91■□□□□ 0.78
SMPD1P17405 AC004801.5-202ENST00000546804 530 ntTSL 4 BASIC19.91■□□□□ 0.78
SMPD1P17405 TWSG1-202ENST00000581641 1119 ntTSL 2 BASIC19.91■□□□□ 0.78
SMPD1P17405 AC005256.1-202ENST00000592934 415 ntTSL 2 BASIC19.91■□□□□ 0.78
SMPD1P17405 MIR1199-201ENST00000621445 119 ntBASIC19.91■□□□□ 0.78
SMPD1P17405 AZIN2-203ENST00000373441 1443 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
SMPD1P17405 LMCD1-204ENST00000426878 1431 ntTSL 2 BASIC19.91■□□□□ 0.78
SMPD1P17405 ATG3-201ENST00000283290 1570 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 43.8 ms