Protein–RNA interactions for Protein: P16619

CCL3L1, C-C motif chemokine 3-like 1, humanhuman

Predictions only

Length 93 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL3L1P16619 ARID3A-201ENST00000263620 5941 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
CCL3L1P16619 SIGLEC6-203ENST00000359982 1811 ntAPPRIS ALT2 TSL 2 BASIC14.87□□□□□ -0.03
CCL3L1P16619 ACSM2B-208ENST00000565322 1834 ntTSL 2 BASIC14.87□□□□□ -0.03
CCL3L1P16619 ACSF3-202ENST00000378345 1541 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
CCL3L1P16619 TSEN34-202ENST00000396383 1548 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
CCL3L1P16619 ZNF470-201ENST00000330619 7151 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
CCL3L1P16619 LINC00574-201ENST00000420557 2318 ntTSL 2 BASIC14.87□□□□□ -0.03
CCL3L1P16619 MST1R-214ENST00000613534 2025 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
CCL3L1P16619 ZNF419-207ENST00000442920 1857 ntAPPRIS ALT2 TSL 2 BASIC14.87□□□□□ -0.03
CCL3L1P16619 FASTK-202ENST00000353841 1402 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
CCL3L1P16619 ACSF2-201ENST00000300441 2235 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
CCL3L1P16619 ZNF133-211ENST00000538547 2245 ntTSL 2 BASIC14.87□□□□□ -0.03
CCL3L1P16619 GPR32-201ENST00000270590 1269 ntAPPRIS P1 BASIC14.87□□□□□ -0.03
CCL3L1P16619 BAALC-202ENST00000306391 243 ntTSL 5 BASIC14.87□□□□□ -0.03
CCL3L1P16619 BAALC-204ENST00000330955 222 ntTSL 5 BASIC14.87□□□□□ -0.03
CCL3L1P16619 PAX3-208ENST00000409828 1254 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
CCL3L1P16619 TSPY12P-201ENST00000421279 868 ntBASIC14.87□□□□□ -0.03
CCL3L1P16619 ISOC2-202ENST00000425675 998 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
CCL3L1P16619 CNP-204ENST00000472031 1019 ntTSL 2 BASIC14.87□□□□□ -0.03
CCL3L1P16619 AC079031.1-201ENST00000542627 1035 ntTSL 3 BASIC14.87□□□□□ -0.03
CCL3L1P16619 TPM1-226ENST00000560959 925 ntTSL 2 BASIC14.87□□□□□ -0.03
CCL3L1P16619 ASF1B-205ENST00000592798 769 ntTSL 2 BASIC14.87□□□□□ -0.03
CCL3L1P16619 ZNF575-205ENST00000601282 1086 ntAPPRIS P1 TSL 2 BASIC14.87□□□□□ -0.03
CCL3L1P16619 AP000550.4-202ENST00000639755 178 ntBASIC14.87□□□□□ -0.03
CCL3L1P16619 KIRREL2-205ENST00000592409 2563 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
CCL3L1P16619 DKK1-201ENST00000373970 1790 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
CCL3L1P16619 ACP5-201ENST00000218758 1630 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
CCL3L1P16619 GTPBP2-202ENST00000307126 2933 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
CCL3L1P16619 WSCD1-209ENST00000574232 2129 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
CCL3L1P16619 ZZZ3-201ENST00000370798 2468 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
CCL3L1P16619 AMACR-205ENST00000426255 1316 ntTSL 2 BASIC14.87□□□□□ -0.03
CCL3L1P16619 WNT5B-201ENST00000310594 2184 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
CCL3L1P16619 ADCY9-201ENST00000294016 7725 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
CCL3L1P16619 TBX18-202ENST00000369663 6245 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
CCL3L1P16619 CMPK2-201ENST00000256722 2884 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
CCL3L1P16619 AC118553.2-203ENST00000639037 2590 ntAPPRIS P5 TSL 5 BASIC14.86□□□□□ -0.03
CCL3L1P16619 BMS1P4-202ENST00000584747 1716 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
CCL3L1P16619 MAEA-201ENST00000264750 2058 ntTSL 2 BASIC14.86□□□□□ -0.03
CCL3L1P16619 SGSM2-201ENST00000268989 4863 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
CCL3L1P16619 SLC2A8-202ENST00000373360 1937 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
CCL3L1P16619 UBE2Q2-208ENST00000569423 2969 ntTSL 2 BASIC14.86□□□□□ -0.03
CCL3L1P16619 LMNA-207ENST00000368301 2461 ntTSL 2 BASIC14.86□□□□□ -0.03
CCL3L1P16619 MORN1-203ENST00000378531 1798 ntAPPRIS P3 TSL 2 BASIC14.86□□□□□ -0.03
CCL3L1P16619 URI1-202ENST00000392271 3444 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
CCL3L1P16619 FRRS1L-201ENST00000561981 8197 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
CCL3L1P16619 TYMSOS-201ENST00000323813 844 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
CCL3L1P16619 AC093585.1-201ENST00000425183 428 ntTSL 2 BASIC14.86□□□□□ -0.03
CCL3L1P16619 CATIP-AS1-202ENST00000441749 480 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
CCL3L1P16619 DMKN-212ENST00000443640 842 ntAPPRIS ALT2 TSL 5 BASIC14.86□□□□□ -0.03
CCL3L1P16619 MHENCR-202ENST00000449500 801 ntTSL 2 BASIC14.86□□□□□ -0.03
CCL3L1P16619 HOXD8-203ENST00000450510 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
CCL3L1P16619 DMKN-215ENST00000451297 1111 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
CCL3L1P16619 AC234772.2-201ENST00000456532 375 ntTSL 3 BASIC14.86□□□□□ -0.03
CCL3L1P16619 NTF4-201ENST00000593537 932 ntAPPRIS P1 BASIC14.86□□□□□ -0.03
CCL3L1P16619 AC124016.1-202ENST00000609575 619 ntTSL 2 BASIC14.86□□□□□ -0.03
CCL3L1P16619 CALM2-209ENST00000628793 1103 ntTSL 5 BASIC14.86□□□□□ -0.03
CCL3L1P16619 PSRC1-205ENST00000409138 1826 ntTSL 2 BASIC14.86□□□□□ -0.03
CCL3L1P16619 PPP2R2C-209ENST00000515571 1832 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
CCL3L1P16619 GDF7-201ENST00000272224 9749 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
CCL3L1P16619 SQOR-201ENST00000260324 2003 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
CCL3L1P16619 TTLL3-209ENST00000426895 2767 ntAPPRIS P2 TSL 2 BASIC14.86□□□□□ -0.03
CCL3L1P16619 AFG3L1P-203ENST00000418696 2965 ntTSL 2 BASIC14.86□□□□□ -0.03
CCL3L1P16619 FAM72C-201ENST00000369175 1658 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
CCL3L1P16619 C19orf48-202ENST00000391812 1666 ntAPPRIS P1 TSL 2 BASIC14.86□□□□□ -0.03
CCL3L1P16619 DAP3-214ENST00000471642 1671 ntTSL 5 BASIC14.86□□□□□ -0.03
CCL3L1P16619 FAM72B-207ENST00000619376 1659 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
CCL3L1P16619 NFKB2-201ENST00000189444 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC14.86□□□□□ -0.03
CCL3L1P16619 SMIM24-201ENST00000215531 1329 ntAPPRIS P2 TSL 1 (best) BASIC14.86□□□□□ -0.03
CCL3L1P16619 SLC12A9-215ENST00000540482 2269 ntTSL 2 BASIC14.86□□□□□ -0.03
CCL3L1P16619 MRC2-201ENST00000303375 5988 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
CCL3L1P16619 USP18-201ENST00000215794 2129 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
CCL3L1P16619 CHTF8-203ENST00000448552 2903 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
CCL3L1P16619 CDH22-203ENST00000537909 3902 ntAPPRIS P1 TSL 2 BASIC14.86□□□□□ -0.03
CCL3L1P16619 CDK2AP2-201ENST00000301488 1378 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
CCL3L1P16619 ARPC1B-201ENST00000252725 1551 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
CCL3L1P16619 IGF2-207ENST00000434045 1583 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
CCL3L1P16619 FAM213B-201ENST00000378424 2765 ntAPPRIS ALT2 TSL 5 BASIC14.85□□□□□ -0.03
CCL3L1P16619 PHF12-201ENST00000268756 2957 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
CCL3L1P16619 CBX1-201ENST00000225603 2232 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
CCL3L1P16619 TMEM59L-201ENST00000262817 1613 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
CCL3L1P16619 RAD51-203ENST00000423169 1611 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
CCL3L1P16619 ENTPD2-202ENST00000355097 2095 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
CCL3L1P16619 SLC22A1-203ENST00000457470 1452 ntTSL 5 BASIC14.85□□□□□ -0.03
CCL3L1P16619 HAAO-201ENST00000294973 1265 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
CCL3L1P16619 TMEM88-201ENST00000301599 875 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
CCL3L1P16619 LBX1-AS1-204ENST00000456391 421 ntTSL 5 BASIC14.85□□□□□ -0.03
CCL3L1P16619 RBM14-RBM4-203ENST00000500635 829 ntTSL 2 BASIC14.85□□□□□ -0.03
CCL3L1P16619 AC022424.1-201ENST00000512155 889 ntTSL 3 BASIC14.85□□□□□ -0.03
CCL3L1P16619 VEGFA-222ENST00000520948 1199 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
CCL3L1P16619 CCDC92-201ENST00000238156 2787 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
CCL3L1P16619 POLR1D-220ENST00000637071 1943 ntTSL 5 BASIC14.85□□□□□ -0.03
CCL3L1P16619 ADAM33-203ENST00000379861 3674 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
CCL3L1P16619 FLJ13224-201ENST00000313737 1514 ntBASIC14.85□□□□□ -0.03
CCL3L1P16619 PTK6-201ENST00000217185 2401 ntTSL 2 BASIC14.85□□□□□ -0.03
CCL3L1P16619 FAM157B-201ENST00000446912 1795 ntTSL 2 BASIC14.85□□□□□ -0.03
CCL3L1P16619 NOC2LP1-202ENST00000452600 2235 ntBASIC14.85□□□□□ -0.03
CCL3L1P16619 MGLL-204ENST00000434178 4941 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
CCL3L1P16619 SMC4-201ENST00000344722 5356 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
CCL3L1P16619 GPS1-201ENST00000306823 1842 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
CCL3L1P16619 NAA60-201ENST00000360862 2522 ntTSL 2 BASIC14.85□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 42.7 ms