Protein–RNA interactions for Protein: P0DP91

CSB-PGBD3, Chimeric ERCC6-PGBD3 protein, humanhuman

Predictions only

Length 1,061 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSB-PGBD3P0DP91 CYP4F8-210ENST00000612078 1889 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
CSB-PGBD3P0DP91 AC132938.6-201ENST00000623828 1655 ntBASIC23.77■■□□□ 1.4
CSB-PGBD3P0DP91 AC073621.1-201ENST00000392730 636 ntBASIC23.77■■□□□ 1.4
CSB-PGBD3P0DP91 KRT18P2-201ENST00000447938 1258 ntBASIC23.77■■□□□ 1.4
CSB-PGBD3P0DP91 AC136632.2-201ENST00000512891 861 ntBASIC23.77■■□□□ 1.4
CSB-PGBD3P0DP91 CPSF1-207ENST00000531727 704 ntTSL 3 BASIC23.77■■□□□ 1.4
CSB-PGBD3P0DP91 AC130456.4-201ENST00000568635 665 ntTSL 2 BASIC23.77■■□□□ 1.4
CSB-PGBD3P0DP91 PLD3-205ENST00000409419 1966 ntAPPRIS P1 TSL 5 BASIC23.77■■□□□ 1.4
CSB-PGBD3P0DP91 SLC25A22-228ENST00000628067 2692 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
CSB-PGBD3P0DP91 HTR1E-201ENST00000305344 2052 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
CSB-PGBD3P0DP91 SLC3A2-206ENST00000535296 2084 ntTSL 5 BASIC23.77■■□□□ 1.4
CSB-PGBD3P0DP91 PTGES2-AS1-201ENST00000443493 2100 ntBASIC23.77■■□□□ 1.4
CSB-PGBD3P0DP91 ERI1-203ENST00000519292 2107 ntAPPRIS P1 TSL 2 BASIC23.77■■□□□ 1.4
CSB-PGBD3P0DP91 UBE3C-201ENST00000348165 5229 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.39
CSB-PGBD3P0DP91 CYGB-201ENST00000293230 2158 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
CSB-PGBD3P0DP91 UQCC3-201ENST00000377953 1947 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
CSB-PGBD3P0DP91 CSK-202ENST00000439220 1900 ntAPPRIS P1 TSL 2 BASIC23.76■■□□□ 1.39
CSB-PGBD3P0DP91 MOV10L1-203ENST00000395852 1422 ntTSL 2 BASIC23.76■■□□□ 1.39
CSB-PGBD3P0DP91 FAM110A-203ENST00000381939 1737 ntAPPRIS P1 TSL 3 BASIC23.76■■□□□ 1.39
CSB-PGBD3P0DP91 PYCR1-217ENST00000629768 1740 ntTSL 5 BASIC23.76■■□□□ 1.39
CSB-PGBD3P0DP91 NEIL2-202ENST00000403422 2016 ntTSL 2 BASIC23.76■■□□□ 1.39
CSB-PGBD3P0DP91 GAS2L1-208ENST00000616432 2925 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
CSB-PGBD3P0DP91 BIN1-202ENST00000316724 2693 ntAPPRIS P4 TSL 1 (best) BASIC23.76■■□□□ 1.39
CSB-PGBD3P0DP91 TOR3A-201ENST00000352445 1182 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
CSB-PGBD3P0DP91 DUSP12-201ENST00000367943 1270 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
CSB-PGBD3P0DP91 SNHG11-205ENST00000421599 1046 ntTSL 3 BASIC23.76■■□□□ 1.39
CSB-PGBD3P0DP91 EEF1D-223ENST00000528610 923 ntAPPRIS ALT2 TSL 1 (best) BASIC23.76■■□□□ 1.39
CSB-PGBD3P0DP91 ETFA-208ENST00000559602 792 ntTSL 3 BASIC23.76■■□□□ 1.39
CSB-PGBD3P0DP91 ARMC7-204ENST00000582136 1204 ntTSL 2 BASIC23.76■■□□□ 1.39
CSB-PGBD3P0DP91 AC097376.2-204ENST00000609359 627 ntTSL 2 BASIC23.76■■□□□ 1.39
CSB-PGBD3P0DP91 AC244517.5-205ENST00000623615 575 ntTSL 4 BASIC23.76■■□□□ 1.39
CSB-PGBD3P0DP91 GMCL1P1-201ENST00000463439 1581 ntBASIC23.76■■□□□ 1.39
CSB-PGBD3P0DP91 PRR14-202ENST00000300835 2198 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
CSB-PGBD3P0DP91 KRT18P28-201ENST00000453838 1332 ntBASIC23.76■■□□□ 1.39
CSB-PGBD3P0DP91 AP004609.1-201ENST00000498872 1646 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
CSB-PGBD3P0DP91 GGN-201ENST00000334928 2239 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
CSB-PGBD3P0DP91 RIMKLB-202ENST00000357529 5830 ntAPPRIS P1 TSL 5 BASIC23.76■■□□□ 1.39
CSB-PGBD3P0DP91 COLEC12-201ENST00000400256 5742 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
CSB-PGBD3P0DP91 NAB2-202ENST00000342556 2318 ntTSL 5 BASIC23.76■■□□□ 1.39
CSB-PGBD3P0DP91 AC005332.7-201ENST00000614046 2005 ntBASIC23.76■■□□□ 1.39
CSB-PGBD3P0DP91 KIF25-AS1-201ENST00000414364 1420 ntTSL 2 BASIC23.76■■□□□ 1.39
CSB-PGBD3P0DP91 IRF7-203ENST00000397566 2051 ntAPPRIS P4 TSL 1 (best) BASIC23.75■■□□□ 1.39
CSB-PGBD3P0DP91 KLC1-217ENST00000554280 2426 ntTSL 5 BASIC23.75■■□□□ 1.39
CSB-PGBD3P0DP91 SLC22A1-203ENST00000457470 1452 ntTSL 5 BASIC23.75■■□□□ 1.39
CSB-PGBD3P0DP91 MED29-202ENST00000594368 1471 ntTSL 2 BASIC23.75■■□□□ 1.39
CSB-PGBD3P0DP91 ATP1B1-201ENST00000367815 1883 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
CSB-PGBD3P0DP91 AC010460.3-201ENST00000511359 1579 ntBASIC23.75■■□□□ 1.39
CSB-PGBD3P0DP91 AC027097.1-202ENST00000592201 1954 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
CSB-PGBD3P0DP91 SIGLEC8-202ENST00000340550 1293 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
CSB-PGBD3P0DP91 AL512785.2-202ENST00000367932 830 ntTSL 4 BASIC23.75■■□□□ 1.39
CSB-PGBD3P0DP91 IGKV4-1-201ENST00000390243 538 ntAPPRIS P1 BASIC23.75■■□□□ 1.39
CSB-PGBD3P0DP91 MCFD2-205ENST00000409218 648 ntAPPRIS P1 TSL 2 BASIC23.75■■□□□ 1.39
CSB-PGBD3P0DP91 AL122058.1-202ENST00000426580 252 ntTSL 3 BASIC23.75■■□□□ 1.39
CSB-PGBD3P0DP91 AC063976.1-201ENST00000457890 381 ntTSL 2 BASIC23.75■■□□□ 1.39
CSB-PGBD3P0DP91 DDIT4-AS1-201ENST00000491934 847 ntTSL 5 BASIC23.75■■□□□ 1.39
CSB-PGBD3P0DP91 ATP6V0D1-203ENST00000540149 1262 ntTSL 2 BASIC23.75■■□□□ 1.39
CSB-PGBD3P0DP91 AL121820.2-201ENST00000556301 279 ntTSL 2 BASIC23.75■■□□□ 1.39
CSB-PGBD3P0DP91 HOPX-214ENST00000556614 1138 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
CSB-PGBD3P0DP91 AC092384.3-201ENST00000561980 531 ntTSL 4 BASIC23.75■■□□□ 1.39
CSB-PGBD3P0DP91 AC018558.2-201ENST00000566562 480 ntTSL 3 BASIC23.75■■□□□ 1.39
CSB-PGBD3P0DP91 AC073592.4-201ENST00000623827 446 ntBASIC23.75■■□□□ 1.39
CSB-PGBD3P0DP91 SMARCD3-202ENST00000356800 1669 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
CSB-PGBD3P0DP91 STIM2-211ENST00000639195 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC23.75■■□□□ 1.39
CSB-PGBD3P0DP91 SLC25A20-201ENST00000319017 1879 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
CSB-PGBD3P0DP91 KIF25-203ENST00000443060 1613 ntAPPRIS P1 TSL 5 BASIC23.74■■□□□ 1.39
CSB-PGBD3P0DP91 COPS8-202ENST00000392008 1654 ntTSL 2 BASIC23.74■■□□□ 1.39
CSB-PGBD3P0DP91 TRMT44-205ENST00000513449 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC23.74■■□□□ 1.39
CSB-PGBD3P0DP91 AC105001.2-201ENST00000554914 1753 ntAPPRIS P1 TSL 2 BASIC23.74■■□□□ 1.39
CSB-PGBD3P0DP91 SEPT9-246ENST00000592951 1793 ntAPPRIS ALT2 TSL 2 BASIC23.74■■□□□ 1.39
CSB-PGBD3P0DP91 ZNF593-201ENST00000270812 698 ntTSL 2 BASIC23.74■■□□□ 1.39
CSB-PGBD3P0DP91 ZHX1-C8orf76-201ENST00000357082 1257 ntAPPRIS P2 TSL 2 BASIC23.74■■□□□ 1.39
CSB-PGBD3P0DP91 HCCS-203ENST00000380763 1000 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
CSB-PGBD3P0DP91 APCDD1L-AS1-201ENST00000420279 555 ntTSL 5 BASIC23.74■■□□□ 1.39
CSB-PGBD3P0DP91 LINC02123-201ENST00000514869 885 ntTSL 1 (best) BASIC23.74■■□□□ 1.39
CSB-PGBD3P0DP91 MCCC2-209ENST00000629193 1128 ntTSL 1 (best) BASIC23.74■■□□□ 1.39
CSB-PGBD3P0DP91 HEXDC-203ENST00000577944 1820 ntTSL 5 BASIC23.74■■□□□ 1.39
CSB-PGBD3P0DP91 KNOP1-205ENST00000568230 1311 ntAPPRIS ALT2 TSL 5 BASIC23.74■■□□□ 1.39
CSB-PGBD3P0DP91 CACNB3-202ENST00000536187 1872 ntTSL 2 BASIC23.74■■□□□ 1.39
CSB-PGBD3P0DP91 TRIM7-205ENST00000422067 1954 ntTSL 1 (best) BASIC23.74■■□□□ 1.39
CSB-PGBD3P0DP91 TULP1-201ENST00000229771 2162 ntAPPRIS P2 TSL 1 (best) BASIC23.74■■□□□ 1.39
CSB-PGBD3P0DP91 DUS1L-202ENST00000354321 2151 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
CSB-PGBD3P0DP91 JMJD6-202ENST00000397625 1603 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
CSB-PGBD3P0DP91 ERCC2-203ENST00000391944 2334 ntTSL 1 (best) BASIC23.73■■□□□ 1.39
CSB-PGBD3P0DP91 DYNC1LI2-201ENST00000258198 4515 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
CSB-PGBD3P0DP91 CHAC1-202ENST00000446533 1849 ntTSL 1 (best) BASIC23.73■■□□□ 1.39
CSB-PGBD3P0DP91 SH3BP5-203ENST00000408919 1880 ntTSL 1 (best) BASIC23.73■■□□□ 1.39
CSB-PGBD3P0DP91 DUOXA1-201ENST00000267803 1996 ntTSL 1 (best) BASIC23.73■■□□□ 1.39
CSB-PGBD3P0DP91 GYG2P1-204ENST00000382966 639 ntTSL 3 BASIC23.73■■□□□ 1.39
CSB-PGBD3P0DP91 METTL21AP1-201ENST00000438852 635 ntBASIC23.73■■□□□ 1.39
CSB-PGBD3P0DP91 AP006288.1-201ENST00000446065 395 ntBASIC23.73■■□□□ 1.39
CSB-PGBD3P0DP91 MRFAP1-203ENST00000507420 563 ntAPPRIS P1 TSL 4 BASIC23.73■■□□□ 1.39
CSB-PGBD3P0DP91 RPL8-207ENST00000528957 1015 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
CSB-PGBD3P0DP91 LINGO1-AS2-201ENST00000557799 663 ntTSL 1 (best) BASIC23.73■■□□□ 1.39
CSB-PGBD3P0DP91 LINC01413-201ENST00000564843 772 ntTSL 3 BASIC23.73■■□□□ 1.39
CSB-PGBD3P0DP91 TMEM220-203ENST00000578345 559 ntAPPRIS ALT2 TSL 2 BASIC23.73■■□□□ 1.39
CSB-PGBD3P0DP91 CROCCP3-203ENST00000589964 255 ntTSL 3 BASIC23.73■■□□□ 1.39
CSB-PGBD3P0DP91 AD001527.2-201ENST00000622994 785 ntBASIC23.73■■□□□ 1.39
CSB-PGBD3P0DP91 DLK1-202ENST00000341267 4722 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
CSB-PGBD3P0DP91 AP001476.1-201ENST00000451618 2198 ntTSL 2 BASIC23.73■■□□□ 1.39
CSB-PGBD3P0DP91 IL17RC-215ENST00000455057 2244 ntAPPRIS ALT2 TSL 1 (best) BASIC23.73■■□□□ 1.39
Retrieved 100 of 98,524 protein–RNA pairs in 28.5 ms