Protein–RNA interactions for Protein: P0CG40

SP9, Transcription factor Sp9, humanhuman

Predictions only

Length 484 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SP9P0CG40 HNRNPFP1-201ENST00000391730 1133 ntBASIC17.62■□□□□ 0.41
SP9P0CG40 ZNF655-216ENST00000449244 544 ntTSL 4 BASIC17.62■□□□□ 0.41
SP9P0CG40 PON3-205ENST00000451904 1053 ntTSL 3 BASIC17.62■□□□□ 0.41
SP9P0CG40 SLBP-205ENST00000488267 987 ntTSL 2 BASIC17.62■□□□□ 0.41
SP9P0CG40 AC067863.1-201ENST00000494933 530 ntBASIC17.62■□□□□ 0.41
SP9P0CG40 NECAP2-208ENST00000504551 768 ntTSL 5 BASIC17.62■□□□□ 0.41
SP9P0CG40 AP000892.1-201ENST00000504906 488 ntTSL 3 BASIC17.62■□□□□ 0.41
SP9P0CG40 POLD4-211ENST00000539074 714 ntTSL 3 BASIC17.62■□□□□ 0.41
SP9P0CG40 PPP1R14A-203ENST00000587515 607 ntTSL 2 BASIC17.62■□□□□ 0.41
SP9P0CG40 AC104971.3-201ENST00000589794 335 ntTSL 2 BASIC17.62■□□□□ 0.41
SP9P0CG40 ATP6AP2-220ENST00000636970 1187 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
SP9P0CG40 RASSF1-202ENST00000357043 1864 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
SP9P0CG40 GAS2L1-207ENST00000611648 2482 ntAPPRIS P1 TSL 2 BASIC17.62■□□□□ 0.41
SP9P0CG40 TMEM200B-202ENST00000521452 2501 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
SP9P0CG40 CLN3-203ENST00000357806 1469 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
SP9P0CG40 RBM34-201ENST00000408888 2054 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
SP9P0CG40 DXO-203ENST00000375356 1533 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
SP9P0CG40 APBB3-203ENST00000357560 2218 ntAPPRIS P3 TSL 5 BASIC17.62■□□□□ 0.41
SP9P0CG40 DMRT2-204ENST00000382251 2292 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
SP9P0CG40 RAP2C-202ENST00000370874 2333 ntAPPRIS P1 TSL 2 BASIC17.61■□□□□ 0.41
SP9P0CG40 ST6GALNAC4-201ENST00000335791 1691 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
SP9P0CG40 YTHDF3-213ENST00000621820 2363 ntTSL 2 BASIC17.61■□□□□ 0.41
SP9P0CG40 CHEK2-202ENST00000348295 1771 ntTSL 5 BASIC17.61■□□□□ 0.41
SP9P0CG40 DTX2-212ENST00000446820 1770 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
SP9P0CG40 PHOSPHO1-201ENST00000310544 1816 ntAPPRIS P1 TSL 2 BASIC17.61■□□□□ 0.41
SP9P0CG40 AD000671.2-201ENST00000589807 1925 ntAPPRIS P1 TSL 2 BASIC17.61■□□□□ 0.41
SP9P0CG40 DNAAF4-201ENST00000321149 1993 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
SP9P0CG40 ITLN1-201ENST00000326245 1183 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
SP9P0CG40 LINC00313-201ENST00000332440 579 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
SP9P0CG40 OSTC-201ENST00000361564 1077 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
SP9P0CG40 EDF1-203ENST00000371649 790 ntTSL 2 BASIC17.61■□□□□ 0.41
SP9P0CG40 C10orf35-201ENST00000373279 1065 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
SP9P0CG40 LINC01143-201ENST00000449073 625 ntTSL 2 BASIC17.61■□□□□ 0.41
SP9P0CG40 IDH3B-206ENST00000474315 1279 ntAPPRIS ALT1 TSL 1 (best) BASIC17.61■□□□□ 0.41
SP9P0CG40 FBXL21-206ENST00000495672 589 ntTSL 4 BASIC17.61■□□□□ 0.41
SP9P0CG40 APBB2-208ENST00000504305 1274 ntTSL 5 BASIC17.61■□□□□ 0.41
SP9P0CG40 TERF1P3-201ENST00000505638 1227 ntBASIC17.61■□□□□ 0.41
SP9P0CG40 NMU-203ENST00000507338 658 ntTSL 3 BASIC17.61■□□□□ 0.41
SP9P0CG40 LINC01485-205ENST00000523617 586 ntTSL 2 BASIC17.61■□□□□ 0.41
SP9P0CG40 DHRS4-205ENST00000558263 1089 ntTSL 5 BASIC17.61■□□□□ 0.41
SP9P0CG40 DHRS4L2-207ENST00000558753 556 ntTSL 2 BASIC17.61■□□□□ 0.41
SP9P0CG40 AC005606.1-201ENST00000567515 504 ntTSL 5 BASIC17.61■□□□□ 0.41
SP9P0CG40 HMOX2-208ENST00000570646 2147 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
SP9P0CG40 OR7E47P-204ENST00000575924 449 ntBASIC17.61■□□□□ 0.41
SP9P0CG40 AJ003147.2-201ENST00000576468 629 ntTSL 3 BASIC17.61■□□□□ 0.41
SP9P0CG40 AC002398.2-201ENST00000587767 660 ntTSL 5 BASIC17.61■□□□□ 0.41
SP9P0CG40 AC015911.4-201ENST00000588022 1070 ntBASIC17.61■□□□□ 0.41
SP9P0CG40 TATDN3-214ENST00000532324 1381 ntTSL 2 BASIC17.61■□□□□ 0.41
SP9P0CG40 CIAO1-203ENST00000488633 1533 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
SP9P0CG40 SH2D2A-201ENST00000368198 1599 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
SP9P0CG40 MRM2-203ENST00000440306 1570 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
SP9P0CG40 ACP5-201ENST00000218758 1630 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
SP9P0CG40 KIF25-203ENST00000443060 1613 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
SP9P0CG40 C10orf111-201ENST00000624760 1714 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
SP9P0CG40 RBM45-207ENST00000616198 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC17.61■□□□□ 0.41
SP9P0CG40 DUOXA1-201ENST00000267803 1996 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
SP9P0CG40 SMURF1-202ENST00000361368 5581 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
SP9P0CG40 DENND1A-201ENST00000373618 3003 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
SP9P0CG40 TMEM41A-201ENST00000296254 1060 ntTSL 2 BASIC17.6■□□□□ 0.41
SP9P0CG40 NDUFA3-201ENST00000303553 379 ntTSL 2 BASIC17.6■□□□□ 0.41
SP9P0CG40 KCNIP2-208ENST00000370046 923 ntTSL 5 BASIC17.6■□□□□ 0.41
SP9P0CG40 HSD17B10-203ENST00000375304 916 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
SP9P0CG40 TSSC4-202ENST00000380992 992 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
SP9P0CG40 RBM43-202ENST00000409092 579 ntAPPRIS ALT2 TSL 2 BASIC17.6■□□□□ 0.41
SP9P0CG40 SGO2-202ENST00000409203 1041 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
SP9P0CG40 AL391650.1-205ENST00000433939 579 ntAPPRIS P1 TSL 3 BASIC17.6■□□□□ 0.41
SP9P0CG40 AC078883.2-201ENST00000441212 558 ntTSL 3 BASIC17.6■□□□□ 0.41
SP9P0CG40 LINC01640-201ENST00000452505 550 ntTSL 4 BASIC17.6■□□□□ 0.41
SP9P0CG40 LINC01812-201ENST00000457448 725 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
SP9P0CG40 C9orf147-204ENST00000463223 863 ntTSL 3 BASIC17.6■□□□□ 0.41
SP9P0CG40 S100A2-206ENST00000497140 697 ntTSL 2 BASIC17.6■□□□□ 0.41
SP9P0CG40 CCDC74BP1-201ENST00000508880 1123 ntBASIC17.6■□□□□ 0.41
SP9P0CG40 ZNF710-AS1-201ENST00000558334 1168 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
SP9P0CG40 LIM2-202ENST00000596399 861 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
SP9P0CG40 GGTLC5P-201ENST00000617623 998 ntBASIC17.6■□□□□ 0.41
SP9P0CG40 ZDHHC11-209ENST00000511539 1303 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
SP9P0CG40 ZDHHC11B-204ENST00000622126 1301 ntTSL 5 BASIC17.6■□□□□ 0.41
SP9P0CG40 GID4-202ENST00000376345 1391 ntTSL 3 BASIC17.6■□□□□ 0.41
SP9P0CG40 PIP4K2A-206ENST00000545335 1436 ntTSL 2 BASIC17.6■□□□□ 0.41
SP9P0CG40 AL353593.2-201ENST00000602529 1483 ntBASIC17.6■□□□□ 0.41
SP9P0CG40 NKIRAS1-202ENST00000412028 1605 ntAPPRIS ALT1 TSL 5 BASIC17.6■□□□□ 0.41
SP9P0CG40 ENOPH1-202ENST00000505846 1689 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
SP9P0CG40 SIGIRR-203ENST00000431843 1720 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
SP9P0CG40 HOXC10-201ENST00000303460 1936 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
SP9P0CG40 AC073107.1-201ENST00000633579 1962 ntTSL 5 BASIC17.6■□□□□ 0.41
SP9P0CG40 DHRS7-201ENST00000216500 2322 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
SP9P0CG40 DRD2-202ENST00000362072 2789 ntAPPRIS P2 TSL 1 (best) BASIC17.6■□□□□ 0.41
SP9P0CG40 INSM1-201ENST00000310227 2829 ntAPPRIS P1 BASIC17.59■□□□□ 0.41
SP9P0CG40 ARFRP1-214ENST00000622789 2559 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
SP9P0CG40 KCNAB3-201ENST00000303790 2458 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
SP9P0CG40 AC011944.1-201ENST00000316148 1900 ntTSL 2 BASIC17.59■□□□□ 0.41
SP9P0CG40 NOTCH2NL-201ENST00000362074 1874 ntAPPRIS P2 TSL 1 (best) BASIC17.59■□□□□ 0.41
SP9P0CG40 CACNB3-202ENST00000536187 1872 ntTSL 2 BASIC17.59■□□□□ 0.41
SP9P0CG40 FAM3A-215ENST00000447601 1800 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
SP9P0CG40 AC132938.5-201ENST00000624980 1813 ntBASIC17.59■□□□□ 0.41
SP9P0CG40 MROH1-202ENST00000423230 1712 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
SP9P0CG40 AC006974.1-201ENST00000637928 1501 ntTSL 5 BASIC17.59■□□□□ 0.41
SP9P0CG40 SGF29-201ENST00000317058 1153 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
SP9P0CG40 XAGE1A-203ENST00000375602 614 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
SP9P0CG40 XAGE1B-203ENST00000375616 614 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 28.3 ms