Protein–RNA interactions for Protein: P0C091

FREM3, FRAS1-related extracellular matrix protein 3, humanhuman

Predictions only

Length 2,139 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FREM3P0C091 KDM8-202ENST00000441782 1612 ntTSL 2 BASIC16.34■□□□□ 0.21
FREM3P0C091 MAP6-201ENST00000304771 3334 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
FREM3P0C091 LRRC32-202ENST00000404995 2656 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
FREM3P0C091 NOS1AP-206ENST00000530878 2894 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
FREM3P0C091 MAZ-212ENST00000568282 1593 ntTSL 5 BASIC16.33■□□□□ 0.21
FREM3P0C091 NRG2-205ENST00000361474 3020 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
FREM3P0C091 AL096828.2-201ENST00000567259 1965 ntBASIC16.33■□□□□ 0.21
FREM3P0C091 FZD10-201ENST00000229030 3281 ntAPPRIS P1 BASIC16.33■□□□□ 0.21
FREM3P0C091 FZD10-202ENST00000539839 3282 ntBASIC16.33■□□□□ 0.21
FREM3P0C091 NETO1-201ENST00000327305 3058 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
FREM3P0C091 ASB13-201ENST00000357700 2699 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
FREM3P0C091 LMNA-207ENST00000368301 2461 ntTSL 2 BASIC16.33■□□□□ 0.21
FREM3P0C091 SH3BP5-203ENST00000408919 1880 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
FREM3P0C091 PDLIM2-206ENST00000409141 1463 ntTSL 2 BASIC16.33■□□□□ 0.21
FREM3P0C091 SMN1-203ENST00000503079 1219 ntTSL 5 BASIC16.33■□□□□ 0.21
FREM3P0C091 AP005717.1-202ENST00000523563 419 ntTSL 3 BASIC16.33■□□□□ 0.21
FREM3P0C091 ZBED5-AS1-202ENST00000529014 771 ntTSL 5 BASIC16.33■□□□□ 0.21
FREM3P0C091 SSBP1-215ENST00000612337 884 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.21
FREM3P0C091 JAKMIP1-202ENST00000409021 2975 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
FREM3P0C091 SEL1L-204ENST00000555824 1631 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
FREM3P0C091 KIF25-AS1-201ENST00000414364 1420 ntTSL 2 BASIC16.33■□□□□ 0.2
FREM3P0C091 PARP16-202ENST00000444347 2352 ntTSL 2 BASIC16.33■□□□□ 0.2
FREM3P0C091 AC112777.1-201ENST00000540175 1423 ntBASIC16.33■□□□□ 0.2
FREM3P0C091 PRSS12-201ENST00000296498 4809 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
FREM3P0C091 AC005865.2-201ENST00000505276 2303 ntTSL 2 BASIC16.33■□□□□ 0.2
FREM3P0C091 IDUA-210ENST00000514224 2130 ntTSL 2 BASIC16.33■□□□□ 0.2
FREM3P0C091 APBB1-215ENST00000608394 2128 ntTSL 5 BASIC16.33■□□□□ 0.2
FREM3P0C091 APBB1-222ENST00000610474 2147 ntTSL 5 BASIC16.33■□□□□ 0.2
FREM3P0C091 NOL3-201ENST00000268605 1394 ntAPPRIS P3 TSL 3 BASIC16.33■□□□□ 0.2
FREM3P0C091 CABP1-201ENST00000288616 1369 ntAPPRIS P4 TSL 1 (best) BASIC16.33■□□□□ 0.2
FREM3P0C091 FBXL20-205ENST00000583610 1739 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.2
FREM3P0C091 MAEA-201ENST00000264750 2058 ntTSL 2 BASIC16.33■□□□□ 0.2
FREM3P0C091 PLK3-201ENST00000372201 2492 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
FREM3P0C091 MIR202HG-201ENST00000300167 384 ntTSL 2 BASIC16.33■□□□□ 0.2
FREM3P0C091 PSMB8-202ENST00000374882 1124 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
FREM3P0C091 MRPL28-203ENST00000429738 310 ntTSL 2 BASIC16.33■□□□□ 0.2
FREM3P0C091 RPP14-206ENST00000466547 805 ntAPPRIS P1 TSL 3 BASIC16.33■□□□□ 0.2
FREM3P0C091 AC064807.1-201ENST00000518942 816 ntTSL 3 BASIC16.33■□□□□ 0.2
FREM3P0C091 LINGO1-AS2-201ENST00000557799 663 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
FREM3P0C091 AC005332.3-201ENST00000589904 676 ntBASIC16.33■□□□□ 0.2
FREM3P0C091 AC022150.1-201ENST00000599222 640 ntTSL 3 BASIC16.33■□□□□ 0.2
FREM3P0C091 C1orf43-210ENST00000640799 1287 ntTSL 5 BASIC16.33■□□□□ 0.2
FREM3P0C091 MFSD14A-201ENST00000370152 2777 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
FREM3P0C091 FLVCR1-201ENST00000366971 5939 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
FREM3P0C091 MARK1-202ENST00000366918 5169 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
FREM3P0C091 NR4A2-204ENST00000409572 2878 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
FREM3P0C091 DCST1-204ENST00000423025 2199 ntAPPRIS ALT2 TSL 2 BASIC16.32■□□□□ 0.2
FREM3P0C091 DBNDD2-204ENST00000372712 1537 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
FREM3P0C091 GPANK1-204ENST00000375900 1814 ntAPPRIS P1 TSL 2 BASIC16.32■□□□□ 0.2
FREM3P0C091 PPP2R2C-209ENST00000515571 1832 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
FREM3P0C091 FGF2-201ENST00000264498 6775 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
FREM3P0C091 PRRT2-212ENST00000636619 2065 ntTSL 5 BASIC16.32■□□□□ 0.2
FREM3P0C091 ZNF133-211ENST00000538547 2245 ntTSL 2 BASIC16.32■□□□□ 0.2
FREM3P0C091 KRTCAP3-202ENST00000407293 942 ntTSL 2 BASIC16.32■□□□□ 0.2
FREM3P0C091 TSPY12P-201ENST00000421279 868 ntBASIC16.32■□□□□ 0.2
FREM3P0C091 LINC01700-201ENST00000433952 1598 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
FREM3P0C091 LEF1-AS1-201ENST00000436413 1045 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
FREM3P0C091 BOC-211ENST00000484034 1286 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
FREM3P0C091 STK32A-AS1-201ENST00000504297 863 ntTSL 3 BASIC16.32■□□□□ 0.2
FREM3P0C091 ERI1-203ENST00000519292 2107 ntAPPRIS P1 TSL 2 BASIC16.32■□□□□ 0.2
FREM3P0C091 LYNX1-204ENST00000614491 4708 ntAPPRIS P1 TSL 2 BASIC16.32■□□□□ 0.2
FREM3P0C091 RELL2-201ENST00000297164 2520 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
FREM3P0C091 MID1IP1-201ENST00000336949 2536 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
FREM3P0C091 PTPA-223ENST00000452489 2526 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
FREM3P0C091 OGFOD2-212ENST00000538755 1949 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
FREM3P0C091 NFATC4-223ENST00000555802 1476 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
FREM3P0C091 POR-209ENST00000439269 1858 ntTSL 2 BASIC16.32■□□□□ 0.2
FREM3P0C091 MB21D2-201ENST00000392452 3368 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
FREM3P0C091 TPD52L1-202ENST00000368388 2147 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
FREM3P0C091 SERPINB6-207ENST00000612421 1570 ntTSL 2 BASIC16.32■□□□□ 0.2
FREM3P0C091 MAPKAPK3-201ENST00000357955 2500 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
FREM3P0C091 CCS-201ENST00000310190 942 ntTSL 5 BASIC16.31■□□□□ 0.2
FREM3P0C091 CARHSP1-201ENST00000311052 746 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
FREM3P0C091 ID2-202ENST00000331129 623 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
FREM3P0C091 RABL2B-209ENST00000435118 1126 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
FREM3P0C091 AC073111.4-202ENST00000486297 585 ntTSL 4 BASIC16.31■□□□□ 0.2
FREM3P0C091 LINC02237-202ENST00000521904 477 ntTSL 3 BASIC16.31■□□□□ 0.2
FREM3P0C091 TMEM218-203ENST00000526175 972 ntAPPRIS P1 TSL 3 BASIC16.31■□□□□ 0.2
FREM3P0C091 SNHG15-203ENST00000578968 982 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
FREM3P0C091 AC008878.2-201ENST00000601870 942 ntAPPRIS P1 TSL 4 BASIC16.31■□□□□ 0.2
FREM3P0C091 AL353801.3-201ENST00000609898 542 ntBASIC16.31■□□□□ 0.2
FREM3P0C091 ZCCHC17-205ENST00000615916 1652 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
FREM3P0C091 AC132938.6-201ENST00000623828 1655 ntBASIC16.31■□□□□ 0.2
FREM3P0C091 TNKS2-201ENST00000371627 6157 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
FREM3P0C091 GMPR-201ENST00000259727 1515 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
FREM3P0C091 SDC1-203ENST00000403076 1523 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
FREM3P0C091 PNMA6E-201ENST00000445091 2192 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
FREM3P0C091 KDM1A-202ENST00000400181 3059 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
FREM3P0C091 LRRC43-201ENST00000339777 2028 ntAPPRIS P2 TSL 5 BASIC16.31■□□□□ 0.2
FREM3P0C091 C19orf25-207ENST00000588871 2128 ntTSL 5 BASIC16.31■□□□□ 0.2
FREM3P0C091 SLC22A1-203ENST00000457470 1452 ntTSL 5 BASIC16.31■□□□□ 0.2
FREM3P0C091 ZIC3-202ENST00000370606 1968 ntTSL 5 BASIC16.31■□□□□ 0.2
FREM3P0C091 KLK5-201ENST00000336334 1563 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
FREM3P0C091 TDP2-202ENST00000378198 2071 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
FREM3P0C091 ZMYND11-214ENST00000509513 2065 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
FREM3P0C091 POLR1D-220ENST00000637071 1943 ntTSL 5 BASIC16.31■□□□□ 0.2
FREM3P0C091 ITGB5-201ENST00000296181 4372 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
FREM3P0C091 FAM157B-201ENST00000446912 1795 ntTSL 2 BASIC16.31■□□□□ 0.2
FREM3P0C091 C18orf32-201ENST00000318240 1128 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
FREM3P0C091 MUC1-204ENST00000343256 648 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 25.8 ms