Protein–RNA interactions for Protein: P08254

MMP3, Stromelysin-1, humanhuman

Predictions only

Length 477 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP3P08254 UNC93B6-202ENST00000528242 690 ntBASIC19.84■□□□□ 0.77
MMP3P08254 AC106782.2-201ENST00000563252 992 ntTSL 3 BASIC19.84■□□□□ 0.77
MMP3P08254 DCTPP1-203ENST00000567983 801 ntTSL 5 BASIC19.84■□□□□ 0.77
MMP3P08254 AC018529.2-201ENST00000612024 828 ntTSL 4 BASIC19.84■□□□□ 0.77
MMP3P08254 MIF4GD-204ENST00000577542 1531 ntTSL 3 BASIC19.84■□□□□ 0.77
MMP3P08254 PTGES-201ENST00000340607 1774 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
MMP3P08254 PTCHD3-202ENST00000622555 1720 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
MMP3P08254 SWSAP1-201ENST00000312423 1684 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
MMP3P08254 TBC1D10C-209ENST00000542590 1659 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
MMP3P08254 RBM26-207ENST00000622611 5230 ntTSL 2 BASIC19.84■□□□□ 0.77
MMP3P08254 AC004817.3-201ENST00000602957 2129 ntBASIC19.84■□□□□ 0.77
MMP3P08254 APBB1-215ENST00000608394 2128 ntTSL 5 BASIC19.84■□□□□ 0.77
MMP3P08254 APBB1-222ENST00000610474 2147 ntTSL 5 BASIC19.84■□□□□ 0.77
MMP3P08254 PRICKLE4-204ENST00000458694 1646 ntAPPRIS P2 TSL 5 BASIC19.84■□□□□ 0.77
MMP3P08254 WDR45-206ENST00000376368 1381 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
MMP3P08254 FOXP3-206ENST00000557224 1371 ntTSL 2 BASIC19.83■□□□□ 0.77
MMP3P08254 GAS2L1P2-202ENST00000442849 2262 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
MMP3P08254 GABRB2-206ENST00000520240 2030 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
MMP3P08254 MEN1-205ENST00000377316 2868 ntTSL 5 BASIC19.83■□□□□ 0.77
MMP3P08254 PPP1R3F-202ENST00000376188 2443 ntTSL 2 BASIC19.83■□□□□ 0.77
MMP3P08254 GRM5-202ENST00000305447 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.77
MMP3P08254 AC087500.1-202ENST00000571689 1715 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
MMP3P08254 PLPBP-201ENST00000328195 2558 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
MMP3P08254 PPP1CC-201ENST00000335007 2559 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
MMP3P08254 GLRB-207ENST00000541722 2765 ntTSL 5 BASIC19.83■□□□□ 0.77
MMP3P08254 PIH1D1-201ENST00000262265 1192 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
MMP3P08254 DPY30-201ENST00000295066 631 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
MMP3P08254 DPY30-202ENST00000342166 708 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
MMP3P08254 COX5BP2-201ENST00000392354 334 ntBASIC19.83■□□□□ 0.77
MMP3P08254 SPDYE21P-201ENST00000413323 827 ntBASIC19.83■□□□□ 0.77
MMP3P08254 PRR29-203ENST00000425164 1266 ntTSL 2 BASIC19.83■□□□□ 0.77
MMP3P08254 AL591424.1-201ENST00000442569 1213 ntBASIC19.83■□□□□ 0.77
MMP3P08254 SMIM27-204ENST00000453396 1003 ntAPPRIS ALT2 TSL 3 BASIC19.83■□□□□ 0.77
MMP3P08254 FLJ20021-201ENST00000527564 790 ntTSL 2 BASIC19.83■□□□□ 0.77
MMP3P08254 AC068389.2-201ENST00000529518 430 ntTSL 2 BASIC19.83■□□□□ 0.77
MMP3P08254 FAU-209ENST00000531743 697 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
MMP3P08254 AC127496.4-201ENST00000571591 549 ntTSL 4 BASIC19.83■□□□□ 0.77
MMP3P08254 AL022328.2-201ENST00000608016 640 ntTSL 3 BASIC19.83■□□□□ 0.77
MMP3P08254 NXNL2-205ENST00000618633 739 ntTSL 5 BASIC19.83■□□□□ 0.77
MMP3P08254 PRDM14-201ENST00000276594 2344 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
MMP3P08254 PCOLCE-AS1-201ENST00000442166 2537 ntTSL 2 BASIC19.83■□□□□ 0.76
MMP3P08254 GIT1-201ENST00000225394 3768 ntAPPRIS P3 TSL 1 (best) BASIC19.83■□□□□ 0.76
MMP3P08254 VRK3-225ENST00000601912 1668 ntAPPRIS ALT2 TSL 5 BASIC19.83■□□□□ 0.76
MMP3P08254 ZNF281-202ENST00000367352 2933 ntAPPRIS ALT2 TSL 2 BASIC19.83■□□□□ 0.76
MMP3P08254 CXXC1-202ENST00000412036 2280 ntAPPRIS ALT1 TSL 1 (best) BASIC19.83■□□□□ 0.76
MMP3P08254 SIGLEC16-201ENST00000599858 1437 ntBASIC19.83■□□□□ 0.76
MMP3P08254 PANK1-201ENST00000307534 6976 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
MMP3P08254 IGFALS-202ENST00000415638 2136 ntTSL 2 BASIC19.82■□□□□ 0.76
MMP3P08254 ZNF296-201ENST00000303809 1744 ntAPPRIS P2 TSL 1 (best) BASIC19.82■□□□□ 0.76
MMP3P08254 SEMA3B-210ENST00000611067 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
MMP3P08254 TWF1-201ENST00000395510 3045 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
MMP3P08254 ADAP1-205ENST00000449296 2093 ntTSL 2 BASIC19.82■□□□□ 0.76
MMP3P08254 CNEP1R1-203ENST00000458059 2965 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
MMP3P08254 NFIX-202ENST00000360105 5459 ntTSL 5 BASIC19.82■□□□□ 0.76
MMP3P08254 DPM3-203ENST00000368400 409 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
MMP3P08254 OARD1-201ENST00000373154 1129 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
MMP3P08254 RFXANK-202ENST00000392324 1059 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
MMP3P08254 VPS13A-AS1-201ENST00000415172 519 ntTSL 2 BASIC19.82■□□□□ 0.76
MMP3P08254 AC016999.1-201ENST00000447880 452 ntTSL 3 BASIC19.82■□□□□ 0.76
MMP3P08254 AC091182.1-202ENST00000518765 713 ntTSL 2 BASIC19.82■□□□□ 0.76
MMP3P08254 SPCS2-202ENST00000526361 772 ntTSL 2 BASIC19.82■□□□□ 0.76
MMP3P08254 SLC25A3P1-206ENST00000569142 925 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
MMP3P08254 SDCCAG3P1-201ENST00000589292 1150 ntBASIC19.82■□□□□ 0.76
MMP3P08254 AC073592.5-201ENST00000624854 528 ntBASIC19.82■□□□□ 0.76
MMP3P08254 PIANP-201ENST00000320591 2323 ntAPPRIS P3 TSL 1 (best) BASIC19.82■□□□□ 0.76
MMP3P08254 MARK2-211ENST00000513765 2671 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
MMP3P08254 NSMF-201ENST00000265663 2981 ntAPPRIS P3 TSL 1 (best) BASIC19.82■□□□□ 0.76
MMP3P08254 SRP68-201ENST00000307877 2649 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
MMP3P08254 SLC29A2-201ENST00000311161 2262 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
MMP3P08254 TPGS2-219ENST00000593035 1727 ntAPPRIS ALT2 TSL 2 BASIC19.82■□□□□ 0.76
MMP3P08254 KCNH2-202ENST00000330883 3267 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
MMP3P08254 TMEM79-203ENST00000405535 2201 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
MMP3P08254 NOTCH2NL-201ENST00000362074 1874 ntAPPRIS P2 TSL 1 (best) BASIC19.82■□□□□ 0.76
MMP3P08254 LINC01819-201ENST00000422351 2156 ntTSL 5 BASIC19.81■□□□□ 0.76
MMP3P08254 ACSM2A-201ENST00000219054 1988 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
MMP3P08254 FCER2-202ENST00000360067 1482 ntAPPRIS ALT2 TSL 5 BASIC19.81■□□□□ 0.76
MMP3P08254 AC002310.2-202ENST00000492040 1488 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
MMP3P08254 SOX21-201ENST00000376945 2778 ntAPPRIS P1 BASIC19.81■□□□□ 0.76
MMP3P08254 ADM-208ENST00000534464 1640 ntTSL 2 BASIC19.81■□□□□ 0.76
MMP3P08254 NPEPL1-203ENST00000525817 1780 ntTSL 2 BASIC19.81■□□□□ 0.76
MMP3P08254 PLGRKT-201ENST00000223864 932 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
MMP3P08254 ROMO1-201ENST00000336695 496 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
MMP3P08254 VMO1-202ENST00000354194 651 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
MMP3P08254 KRT18P27-201ENST00000427733 1299 ntBASIC19.81■□□□□ 0.76
MMP3P08254 AC103564.2-201ENST00000432853 1299 ntBASIC19.81■□□□□ 0.76
MMP3P08254 KRT18P3-201ENST00000451602 1288 ntBASIC19.81■□□□□ 0.76
MMP3P08254 CR559946.1-201ENST00000453835 531 ntTSL 4 BASIC19.81■□□□□ 0.76
MMP3P08254 NMU-202ENST00000505262 693 ntTSL 3 BASIC19.81■□□□□ 0.76
MMP3P08254 AC025162.1-201ENST00000554022 565 ntTSL 4 BASIC19.81■□□□□ 0.76
MMP3P08254 BEAN1-203ENST00000561796 1078 ntAPPRIS P2 TSL 1 (best) BASIC19.81■□□□□ 0.76
MMP3P08254 INSM2-201ENST00000307169 3013 ntAPPRIS P1 BASIC19.81■□□□□ 0.76
MMP3P08254 FAM171A2-201ENST00000293443 3160 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
MMP3P08254 LRRC1-202ENST00000370888 3180 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
MMP3P08254 ACOT4-201ENST00000326303 2362 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
MMP3P08254 TMPRSS2-206ENST00000458356 1701 ntAPPRIS P1 TSL 2 BASIC19.81■□□□□ 0.76
MMP3P08254 SNX11-201ENST00000359238 2315 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
MMP3P08254 RGS11-203ENST00000359740 1371 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
MMP3P08254 STARD7-AS1-202ENST00000446816 1527 ntTSL 2 BASIC19.81■□□□□ 0.76
MMP3P08254 CHAC1-202ENST00000446533 1849 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
MMP3P08254 SALRNA1-201ENST00000555871 2086 ntTSL 4 BASIC19.8■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 46.1 ms