Protein–RNA interactions for Protein: P04440

HLA-DPB1, HLA class II histocompatibility antigen, DP beta 1 chain, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPB1P04440 WT1-201ENST00000332351 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
HLA-DPB1P04440 GJA4-201ENST00000342280 1622 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
HLA-DPB1P04440 PEPD-203ENST00000436370 1638 ntTSL 2 BASIC16.23■□□□□ 0.19
HLA-DPB1P04440 KCNQ1-201ENST00000155840 3245 ntAPPRIS P2 TSL 1 (best) BASIC16.23■□□□□ 0.19
HLA-DPB1P04440 AC096719.1-201ENST00000510705 1874 ntTSL 5 BASIC16.22■□□□□ 0.19
HLA-DPB1P04440 DLGAP1-222ENST00000639615 1898 ntTSL 5 BASIC16.22■□□□□ 0.19
HLA-DPB1P04440 MTCL1-205ENST00000517570 6009 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
HLA-DPB1P04440 DTNB-209ENST00000407038 2294 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
HLA-DPB1P04440 TNIP1-208ENST00000520931 2680 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
HLA-DPB1P04440 TMEM177-204ENST00000424086 1738 ntAPPRIS P1 TSL 2 BASIC16.22■□□□□ 0.19
HLA-DPB1P04440 KRT17P2-201ENST00000300992 1314 ntBASIC16.22■□□□□ 0.19
HLA-DPB1P04440 PPP1R7-202ENST00000272983 1954 ntTSL 2 BASIC16.22■□□□□ 0.19
HLA-DPB1P04440 MARVELD3-202ENST00000299952 2214 ntAPPRIS ALT2 TSL 2 BASIC16.22■□□□□ 0.19
HLA-DPB1P04440 ODF2-204ENST00000372814 2249 ntTSL 2 BASIC16.22■□□□□ 0.19
HLA-DPB1P04440 EN2-201ENST00000297375 3395 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
HLA-DPB1P04440 LUC7L-202ENST00000337351 2097 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
HLA-DPB1P04440 BPGM-202ENST00000393132 2051 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
HLA-DPB1P04440 TAF1C-222ENST00000570117 2349 ntAPPRIS ALT2 TSL 2 BASIC16.22■□□□□ 0.19
HLA-DPB1P04440 AL138752.2-201ENST00000540557 2591 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
HLA-DPB1P04440 STX11-201ENST00000367568 1926 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
HLA-DPB1P04440 PCK2-205ENST00000558096 2433 ntTSL 2 BASIC16.22■□□□□ 0.19
HLA-DPB1P04440 METTL21A-206ENST00000432416 869 ntTSL 3 BASIC16.22■□□□□ 0.19
HLA-DPB1P04440 FDX2-206ENST00000492239 773 ntTSL 2 BASIC16.22■□□□□ 0.19
HLA-DPB1P04440 AC097488.1-201ENST00000507834 756 ntBASIC16.22■□□□□ 0.19
HLA-DPB1P04440 TMEM263-203ENST00000547242 811 ntAPPRIS P1 TSL 2 BASIC16.22■□□□□ 0.19
HLA-DPB1P04440 AL355075.4-201ENST00000554988 638 ntBASIC16.22■□□□□ 0.19
HLA-DPB1P04440 CFL2-205ENST00000555765 632 ntTSL 2 BASIC16.22■□□□□ 0.19
HLA-DPB1P04440 KLHL26-205ENST00000599006 989 ntTSL 5 BASIC16.22■□□□□ 0.19
HLA-DPB1P04440 SMAGP-204ENST00000603838 816 ntTSL 2 BASIC16.22■□□□□ 0.19
HLA-DPB1P04440 AP000692.2-201ENST00000608391 879 ntBASIC16.22■□□□□ 0.19
HLA-DPB1P04440 AL590094.1-202ENST00000634619 1131 ntTSL 5 BASIC16.22■□□□□ 0.19
HLA-DPB1P04440 RCC2P3-201ENST00000418112 1537 ntBASIC16.22■□□□□ 0.19
HLA-DPB1P04440 KCNMA1-261ENST00000639486 8850 ntAPPRIS ALT2 TSL 5 BASIC16.22■□□□□ 0.19
HLA-DPB1P04440 PTPN18-201ENST00000175756 3669 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
HLA-DPB1P04440 RBM17-201ENST00000379888 2755 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
HLA-DPB1P04440 CYTH2-204ENST00000452733 4780 ntAPPRIS P2 TSL 1 (best) BASIC16.22■□□□□ 0.19
HLA-DPB1P04440 VIM-201ENST00000224237 1868 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
HLA-DPB1P04440 TRIM74-201ENST00000285805 1350 ntAPPRIS P2 TSL 1 (best) BASIC16.22■□□□□ 0.19
HLA-DPB1P04440 TRIM73-201ENST00000323819 1358 ntAPPRIS P2 TSL 1 (best) BASIC16.22■□□□□ 0.19
HLA-DPB1P04440 GAL3ST1-206ENST00000406955 1635 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
HLA-DPB1P04440 SMARCB1-204ENST00000407422 1643 ntAPPRIS ALT1 TSL 1 (best) BASIC16.22■□□□□ 0.19
HLA-DPB1P04440 RBPJL-201ENST00000343694 2489 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
HLA-DPB1P04440 CDC14B-208ENST00000463569 1734 ntAPPRIS ALT2 TSL 5 BASIC16.22■□□□□ 0.19
HLA-DPB1P04440 OSMR-202ENST00000502536 1740 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
HLA-DPB1P04440 ANXA6-201ENST00000354546 2593 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
HLA-DPB1P04440 KLC2-203ENST00000394066 2591 ntTSL 2 BASIC16.22■□□□□ 0.19
HLA-DPB1P04440 PDZD8-201ENST00000334464 9699 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
HLA-DPB1P04440 SCUBE2-202ENST00000450649 2912 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
HLA-DPB1P04440 GPR137-204ENST00000438980 1596 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
HLA-DPB1P04440 VARS-215ENST00000375663 4312 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
HLA-DPB1P04440 TSPAN3-201ENST00000267970 6467 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
HLA-DPB1P04440 TBC1D2B-201ENST00000300584 6067 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.19
HLA-DPB1P04440 PHGDH-209ENST00000641074 1780 ntBASIC16.21■□□□□ 0.19
HLA-DPB1P04440 KDM6A-212ENST00000543216 5655 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
HLA-DPB1P04440 UCHL5-202ENST00000367449 1507 ntAPPRIS ALT1 TSL 1 (best) BASIC16.21■□□□□ 0.19
HLA-DPB1P04440 TMEM132E-201ENST00000321639 5631 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.19
HLA-DPB1P04440 PDE4A-201ENST00000293683 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
HLA-DPB1P04440 TNRC18P3-201ENST00000441896 2691 ntBASIC16.21■□□□□ 0.19
HLA-DPB1P04440 AIFM3-203ENST00000405089 2333 ntAPPRIS ALT1 TSL 2 BASIC16.21■□□□□ 0.19
HLA-DPB1P04440 IL17C-201ENST00000244241 1044 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
HLA-DPB1P04440 TCTEX1D2-201ENST00000325318 673 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
HLA-DPB1P04440 TSTD1-202ENST00000368023 574 ntAPPRIS ALT2 TSL 2 BASIC16.21■□□□□ 0.19
HLA-DPB1P04440 AP000593.1-201ENST00000393668 712 ntBASIC16.21■□□□□ 0.19
HLA-DPB1P04440 HDAC11-203ENST00000402271 1018 ntTSL 3 BASIC16.21■□□□□ 0.19
HLA-DPB1P04440 AL162231.1-203ENST00000416454 465 ntAPPRIS ALT2 TSL 2 BASIC16.21■□□□□ 0.19
HLA-DPB1P04440 CRYGFP-201ENST00000418459 633 ntBASIC16.21■□□□□ 0.19
HLA-DPB1P04440 RBM17P1-201ENST00000453646 1190 ntBASIC16.21■□□□□ 0.19
HLA-DPB1P04440 TSPY15P-201ENST00000457163 923 ntBASIC16.21■□□□□ 0.19
HLA-DPB1P04440 USP46-AS1-201ENST00000503051 1048 ntTSL 3 BASIC16.21■□□□□ 0.19
HLA-DPB1P04440 CKBP1-201ENST00000565489 1086 ntBASIC16.21■□□□□ 0.19
HLA-DPB1P04440 ZNF667-AS1-208ENST00000594783 475 ntTSL 3 BASIC16.21■□□□□ 0.19
HLA-DPB1P04440 C16orf74-202ENST00000602583 1237 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
HLA-DPB1P04440 OAZ1-211ENST00000602676 1148 ntAPPRIS P3 TSL 5 BASIC16.21■□□□□ 0.19
HLA-DPB1P04440 ZADH2-201ENST00000322342 7732 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
HLA-DPB1P04440 MRI1-201ENST00000040663 1735 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
HLA-DPB1P04440 ERBB2-205ENST00000578199 2526 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
HLA-DPB1P04440 COL9A1-201ENST00000320755 3059 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
HLA-DPB1P04440 RNF128-201ENST00000255499 2817 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
HLA-DPB1P04440 EGR2-203ENST00000439032 2844 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
HLA-DPB1P04440 CCDC112-205ENST00000506442 2145 ntAPPRIS ALT2 TSL 2 BASIC16.21■□□□□ 0.18
HLA-DPB1P04440 NSUN5-201ENST00000252594 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.18
HLA-DPB1P04440 HASPIN-201ENST00000325418 2797 ntAPPRIS P1 BASIC16.21■□□□□ 0.18
HLA-DPB1P04440 PTP4A3-201ENST00000329397 2785 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
HLA-DPB1P04440 LPAR2-201ENST00000407877 1791 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
HLA-DPB1P04440 OARD1-202ENST00000424266 1337 ntAPPRIS P1 TSL 2 BASIC16.2■□□□□ 0.18
HLA-DPB1P04440 ETNK2-202ENST00000367201 2431 ntAPPRIS ALT2 TSL 2 BASIC16.2■□□□□ 0.18
HLA-DPB1P04440 MAPKAP1-208ENST00000394063 2977 ntTSL 5 BASIC16.2■□□□□ 0.18
HLA-DPB1P04440 TBL2-201ENST00000305632 3161 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
HLA-DPB1P04440 EPHA10-201ENST00000319637 2050 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
HLA-DPB1P04440 SLC25A29-215ENST00000556505 1540 ntTSL 2 BASIC16.2■□□□□ 0.18
HLA-DPB1P04440 BTNL9-202ENST00000376841 1626 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
HLA-DPB1P04440 PRDM5-212ENST00000515109 2259 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
HLA-DPB1P04440 ABCC5-204ENST00000392579 1848 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
HLA-DPB1P04440 CLCN2-204ENST00000434054 2897 ntAPPRIS ALT2 TSL 2 BASIC16.2■□□□□ 0.18
HLA-DPB1P04440 UNC93B2-201ENST00000285383 730 ntBASIC16.2■□□□□ 0.18
HLA-DPB1P04440 SSNA1-201ENST00000322310 896 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
HLA-DPB1P04440 UXT-201ENST00000333119 574 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
HLA-DPB1P04440 MDK-201ENST00000359803 985 ntAPPRIS P2 TSL 2 BASIC16.2■□□□□ 0.18
HLA-DPB1P04440 WWTR1-201ENST00000360632 2103 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
HLA-DPB1P04440 RTBDN-202ENST00000393233 1000 ntAPPRIS ALT2 TSL 3 BASIC16.2■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 37.1 ms