Protein–RNA interactions for Protein: P04085

PDGFA, Platelet-derived growth factor subunit A, humanhuman

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFAP04085 HBZ-201ENST00000252951 755 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
PDGFAP04085 TMEM128-201ENST00000254742 1737 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
PDGFAP04085 TAF5L-201ENST00000258281 3112 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
PDGFAP04085 TRA2B-202ENST00000342294 288 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
PDGFAP04085 IFNLR1-205ENST00000374421 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
PDGFAP04085 C1QC-203ENST00000374640 1163 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
PDGFAP04085 SERPINF2-202ENST00000382061 2265 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
PDGFAP04085 OTOS-202ENST00000391989 645 ntAPPRIS P1 TSL 3 BASIC16.83■□□□□ 0.28
PDGFAP04085 PPP3CA-203ENST00000394854 4685 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
PDGFAP04085 AIFM3-203ENST00000405089 2333 ntAPPRIS ALT1 TSL 2 BASIC16.83■□□□□ 0.28
PDGFAP04085 EWSR1-207ENST00000406548 2207 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
PDGFAP04085 CTBP2-205ENST00000411419 2036 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
PDGFAP04085 IGF2-206ENST00000418738 934 ntAPPRIS P2 TSL 1 (best) BASIC16.83■□□□□ 0.28
PDGFAP04085 POM121L3P-201ENST00000419331 1163 ntBASIC16.83■□□□□ 0.28
PDGFAP04085 LINC02028-204ENST00000449350 1419 ntTSL 3 BASIC16.83■□□□□ 0.28
PDGFAP04085 RGMB-AS1-201ENST00000498871 1903 ntTSL 2 BASIC16.83■□□□□ 0.28
PDGFAP04085 SDC2-202ENST00000518385 1583 ntTSL 5 BASIC16.83■□□□□ 0.28
PDGFAP04085 NCAM1-AS1-202ENST00000533638 618 ntTSL 4 BASIC16.83■□□□□ 0.28
PDGFAP04085 AC009065.1-201ENST00000564055 1225 ntBASIC16.83■□□□□ 0.28
PDGFAP04085 MIEN1-205ENST00000577810 806 ntTSL 3 BASIC16.83■□□□□ 0.28
PDGFAP04085 AL049840.3-201ENST00000602669 611 ntBASIC16.83■□□□□ 0.28
PDGFAP04085 AL591684.3-201ENST00000605187 298 ntBASIC16.83■□□□□ 0.28
PDGFAP04085 KRT89P-201ENST00000620027 1478 ntBASIC16.83■□□□□ 0.28
PDGFAP04085 LRRC23-201ENST00000007969 1615 ntAPPRIS P4 TSL 1 (best) BASIC16.83■□□□□ 0.28
PDGFAP04085 KIAA1522-204ENST00000401073 5438 ntAPPRIS P3 TSL 2 BASIC16.83■□□□□ 0.28
PDGFAP04085 NUDT4-202ENST00000415493 4839 ntAPPRIS ALT1 TSL 1 (best) BASIC16.83■□□□□ 0.28
PDGFAP04085 KDM1A-201ENST00000356634 3033 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.28
PDGFAP04085 SPATA18-202ENST00000419395 2816 ntTSL 2 BASIC16.83■□□□□ 0.28
PDGFAP04085 FOXI3-201ENST00000428390 2804 ntAPPRIS P1 TSL 3 BASIC16.83■□□□□ 0.28
PDGFAP04085 PCDHA2-203ENST00000526136 5254 ntAPPRIS P2 TSL 1 (best) BASIC16.83■□□□□ 0.28
PDGFAP04085 EIF2AK3-201ENST00000303236 4646 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
PDGFAP04085 WNT8B-201ENST00000343737 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
PDGFAP04085 WFIKKN1-201ENST00000319070 2028 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
PDGFAP04085 CCT7-215ENST00000539919 2031 ntTSL 2 BASIC16.82■□□□□ 0.28
PDGFAP04085 SIX5-203ENST00000560168 1975 ntTSL 4 BASIC16.82■□□□□ 0.28
PDGFAP04085 SLC26A11-212ENST00000572725 1862 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
PDGFAP04085 EDC3-214ENST00000568176 1825 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
PDGFAP04085 FNBP1-202ENST00000420781 5410 ntAPPRIS ALT1 TSL 1 (best) BASIC16.82■□□□□ 0.28
PDGFAP04085 KIAA1324L-207ENST00000444627 3527 ntTSL 5 BASIC16.82■□□□□ 0.28
PDGFAP04085 LYNX1-204ENST00000614491 4708 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
PDGFAP04085 SQSTM1-202ENST00000389805 2986 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
PDGFAP04085 TMC6-202ENST00000322914 2786 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
PDGFAP04085 IL17RC-201ENST00000295981 2621 ntAPPRIS P4 TSL 2 BASIC16.82■□□□□ 0.28
PDGFAP04085 AC011270.2-201ENST00000624293 2550 ntBASIC16.82■□□□□ 0.28
PDGFAP04085 FARP1-242ENST00000627049 5103 ntTSL 5 BASIC16.82■□□□□ 0.28
PDGFAP04085 ANKRD37-201ENST00000335174 1141 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
PDGFAP04085 HES2-202ENST00000377836 507 ntTSL 2 BASIC16.82■□□□□ 0.28
PDGFAP04085 TM4SF19-TCTEX1D2-201ENST00000442633 964 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
PDGFAP04085 AC097372.2-201ENST00000510996 732 ntTSL 3 BASIC16.82■□□□□ 0.28
PDGFAP04085 POLD2P1-201ENST00000511220 997 ntBASIC16.82■□□□□ 0.28
PDGFAP04085 MRPL52-210ENST00000555345 895 ntTSL 2 BASIC16.82■□□□□ 0.28
PDGFAP04085 CCDC61-202ENST00000594087 1017 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
PDGFAP04085 MARC2-202ENST00000366913 2134 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
PDGFAP04085 VWA8-AS1-201ENST00000611103 2079 ntTSL 2 BASIC16.82■□□□□ 0.28
PDGFAP04085 GPR146-201ENST00000397095 1969 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
PDGFAP04085 P2RX2-206ENST00000389110 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
PDGFAP04085 Z98044.1-201ENST00000632503 1764 ntBASIC16.82■□□□□ 0.28
PDGFAP04085 STK11-201ENST00000326873 2611 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
PDGFAP04085 BORCS6-201ENST00000389017 2575 ntAPPRIS P1 BASIC16.82■□□□□ 0.28
PDGFAP04085 SERPINB6-207ENST00000612421 1570 ntTSL 2 BASIC16.81■□□□□ 0.28
PDGFAP04085 FBLN7-202ENST00000331203 2301 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
PDGFAP04085 ZNF667-AS1-201ENST00000585445 1521 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
PDGFAP04085 RAB4A-201ENST00000366690 2966 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
PDGFAP04085 ASB6-202ENST00000277459 2180 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
PDGFAP04085 PODXL2-201ENST00000342480 2186 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
PDGFAP04085 PRORSD1P-202ENST00000563365 2154 ntBASIC16.81■□□□□ 0.28
PDGFAP04085 AC011416.4-201ENST00000639283 2195 ntTSL 5 BASIC16.81■□□□□ 0.28
PDGFAP04085 ARFIP2-203ENST00000423813 1430 ntTSL 2 BASIC16.81■□□□□ 0.28
PDGFAP04085 KRT8P50-201ENST00000562022 1438 ntBASIC16.81■□□□□ 0.28
PDGFAP04085 AQP8-201ENST00000219660 1359 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
PDGFAP04085 GTPBP8-203ENST00000383678 1360 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
PDGFAP04085 DUSP15-204ENST00000398083 1212 ntTSL 5 BASIC16.81■□□□□ 0.28
PDGFAP04085 ODF3B-202ENST00000401779 869 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
PDGFAP04085 ODF3B-203ENST00000403326 643 ntTSL 3 BASIC16.81■□□□□ 0.28
PDGFAP04085 PAX3-208ENST00000409828 1254 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
PDGFAP04085 ODF3B-205ENST00000428989 762 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
PDGFAP04085 TXNRD2-212ENST00000485358 850 ntTSL 2 BASIC16.81■□□□□ 0.28
PDGFAP04085 AC096582.2-201ENST00000510860 516 ntBASIC16.81■□□□□ 0.28
PDGFAP04085 ENDOV-205ENST00000518644 625 ntTSL 4 BASIC16.81■□□□□ 0.28
PDGFAP04085 COX6C-204ENST00000520271 571 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
PDGFAP04085 MRPL49-206ENST00000531705 489 ntTSL 5 BASIC16.81■□□□□ 0.28
PDGFAP04085 DYNLL1-204ENST00000548214 616 ntTSL 2 BASIC16.81■□□□□ 0.28
PDGFAP04085 L2HGDH-205ENST00000555423 841 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
PDGFAP04085 SMAD3-210ENST00000559092 584 ntTSL 4 BASIC16.81■□□□□ 0.28
PDGFAP04085 AC099518.3-201ENST00000564808 809 ntAPPRIS P5 TSL 4 BASIC16.81■□□□□ 0.28
PDGFAP04085 AC012615.3-201ENST00000592884 500 ntTSL 3 BASIC16.81■□□□□ 0.28
PDGFAP04085 AC011530.1-201ENST00000593999 558 ntTSL 2 BASIC16.81■□□□□ 0.28
PDGFAP04085 NOMO3-202ENST00000399336 4356 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
PDGFAP04085 CDK11A-205ENST00000378633 2458 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
PDGFAP04085 SEPT8-216ENST00000620483 4335 ntTSL 5 BASIC16.81■□□□□ 0.28
PDGFAP04085 AL357033.4-201ENST00000617703 1807 ntBASIC16.81■□□□□ 0.28
PDGFAP04085 CELF2-217ENST00000638035 1849 ntAPPRIS P3 TSL 5 BASIC16.81■□□□□ 0.28
PDGFAP04085 SHANK1-202ENST00000359082 6459 ntTSL 5 BASIC16.81■□□□□ 0.28
PDGFAP04085 MYEOV-201ENST00000308946 2287 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
PDGFAP04085 PKD2-201ENST00000237596 5056 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
PDGFAP04085 PCDHB2-202ENST00000622947 2231 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
PDGFAP04085 ZNF74-201ENST00000357502 2788 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
PDGFAP04085 PTPA-203ENST00000348141 2737 ntTSL 5 BASIC16.81■□□□□ 0.28
PDGFAP04085 PTPA-207ENST00000393370 2737 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
PDGFAP04085 ZNF394-201ENST00000337673 2179 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 25.2 ms