Protein–RNA interactions for Protein: P02656

APOC3, Apolipoprotein C-III, humanhuman

Predictions only

Length 99 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOC3P02656 CYP2T1P-202ENST00000641596 2535 ntBASIC14.5□□□□□ -0.09
APOC3P02656 SLC3A2-203ENST00000377890 2161 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
APOC3P02656 SHTN1-203ENST00000392901 2190 ntAPPRIS ALT2 TSL 2 BASIC14.5□□□□□ -0.09
APOC3P02656 FDXR-205ENST00000544854 1827 ntTSL 2 BASIC14.5□□□□□ -0.09
APOC3P02656 PRR7-201ENST00000323249 1480 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
APOC3P02656 FMNL3-202ENST00000352151 4006 ntAPPRIS P3 TSL 2 BASIC14.5□□□□□ -0.09
APOC3P02656 UROC1-202ENST00000383579 2735 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
APOC3P02656 CERKL-201ENST00000339098 1677 ntAPPRIS P3 TSL 1 (best) BASIC14.49□□□□□ -0.09
APOC3P02656 NCCRP1-201ENST00000339852 1978 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
APOC3P02656 INPPL1-207ENST00000538751 4656 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
APOC3P02656 USP36-201ENST00000312010 5234 ntAPPRIS P2 TSL 5 BASIC14.49□□□□□ -0.09
APOC3P02656 CENPH-206ENST00000515001 1305 ntTSL 2 BASIC14.49□□□□□ -0.09
APOC3P02656 PDE4A-203ENST00000380702 4781 ntAPPRIS P4 TSL 1 (best) BASIC14.49□□□□□ -0.09
APOC3P02656 AC007009.1-201ENST00000458624 429 ntTSL 2 BASIC14.49□□□□□ -0.09
APOC3P02656 ABHD17AP3-201ENST00000503096 1137 ntBASIC14.49□□□□□ -0.09
APOC3P02656 RB1CC1-202ENST00000435644 6614 ntAPPRIS ALT1 TSL 1 (best) BASIC14.49□□□□□ -0.09
APOC3P02656 GOLGA6L5P-202ENST00000515341 1828 ntBASIC14.49□□□□□ -0.09
APOC3P02656 IFRD1-201ENST00000005558 1834 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
APOC3P02656 C18orf25-203ENST00000615052 5462 ntAPPRIS P1 TSL 5 BASIC14.49□□□□□ -0.09
APOC3P02656 ASTN2-201ENST00000288520 2356 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
APOC3P02656 SMAGP-205ENST00000603864 1518 ntAPPRIS P1 TSL 2 BASIC14.49□□□□□ -0.09
APOC3P02656 EIF4G1-212ENST00000424196 5653 ntTSL 2 BASIC14.49□□□□□ -0.09
APOC3P02656 NRSN2-202ENST00000382291 2088 ntAPPRIS P1 TSL 2 BASIC14.49□□□□□ -0.09
APOC3P02656 TAS1R1-201ENST00000333172 2892 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
APOC3P02656 ADAMTS14-202ENST00000373208 5269 ntAPPRIS P4 TSL 2 BASIC14.49□□□□□ -0.09
APOC3P02656 TTC24-201ENST00000368236 2005 ntAPPRIS P1 TSL 5 BASIC14.49□□□□□ -0.09
APOC3P02656 SIGLEC10-201ENST00000339313 2256 ntAPPRIS P3 TSL 1 (best) BASIC14.49□□□□□ -0.09
APOC3P02656 SYBU-208ENST00000440310 3072 ntAPPRIS ALT2 TSL 5 BASIC14.49□□□□□ -0.09
APOC3P02656 GLUL-202ENST00000331872 4364 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
APOC3P02656 KIF26A-201ENST00000315264 6714 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
APOC3P02656 KCNC2-208ENST00000549446 5625 ntAPPRIS P4 TSL 1 (best) BASIC14.49□□□□□ -0.09
APOC3P02656 IRF4-201ENST00000380956 5331 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
APOC3P02656 NR2F1-205ENST00000615873 1427 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
APOC3P02656 ATG9B-212ENST00000639579 4539 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
APOC3P02656 PLAGL1-211ENST00000625622 3216 ntAPPRIS P1 TSL 2 BASIC14.49□□□□□ -0.09
APOC3P02656 OGFOD3-202ENST00000329197 1652 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
APOC3P02656 NRG2-209ENST00000541337 3723 ntTSL 5 BASIC14.49□□□□□ -0.09
APOC3P02656 AK4-202ENST00000395334 6998 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
APOC3P02656 FBXL5-201ENST00000341285 3385 ntAPPRIS P3 TSL 1 (best) BASIC14.48□□□□□ -0.09
APOC3P02656 LILRB5-202ENST00000345866 1864 ntTSL 2 BASIC14.48□□□□□ -0.09
APOC3P02656 ALKAL2-204ENST00000403610 1389 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
APOC3P02656 CHFR-203ENST00000432561 2648 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
APOC3P02656 AC092384.3-202ENST00000564646 2873 ntBASIC14.48□□□□□ -0.09
APOC3P02656 LINGO1-201ENST00000355300 3055 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
APOC3P02656 VPS16-203ENST00000380469 2318 ntTSL 2 BASIC14.48□□□□□ -0.09
APOC3P02656 NANOS1-202ENST00000425699 4017 ntAPPRIS P2 BASIC14.48□□□□□ -0.09
APOC3P02656 PATZ1-202ENST00000266269 3781 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
APOC3P02656 CASC2-203ENST00000435944 3270 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
APOC3P02656 ETV2-202ENST00000379026 1571 ntAPPRIS ALT2 TSL 2 BASIC14.48□□□□□ -0.09
APOC3P02656 ZFAND5-205ENST00000376962 2785 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
APOC3P02656 PRDM6-201ENST00000407847 9267 ntAPPRIS P1 TSL 5 BASIC14.48□□□□□ -0.09
APOC3P02656 EEF1D-225ENST00000529272 1311 ntAPPRIS ALT2 TSL 2 BASIC14.48□□□□□ -0.09
APOC3P02656 SLC25A45-202ENST00000398802 2286 ntAPPRIS P1 TSL 5 BASIC14.48□□□□□ -0.09
APOC3P02656 SMOC1-201ENST00000361956 2040 ntAPPRIS ALT1 TSL 1 (best) BASIC14.48□□□□□ -0.09
APOC3P02656 BCAT2-202ENST00000402551 2041 ntTSL 2 BASIC14.48□□□□□ -0.09
APOC3P02656 GAMT-202ENST00000447102 1769 ntTSL 2 BASIC14.48□□□□□ -0.09
APOC3P02656 ASB16-AS1-201ENST00000585457 2213 ntTSL 2 BASIC14.48□□□□□ -0.09
APOC3P02656 AKT1S1-205ENST00000391833 3640 ntAPPRIS P1 TSL 2 BASIC14.48□□□□□ -0.09
APOC3P02656 IGFBP6-201ENST00000301464 1169 ntAPPRIS P2 TSL 1 (best) BASIC14.48□□□□□ -0.09
APOC3P02656 KRTAP17-1-201ENST00000334202 779 ntAPPRIS P1 BASIC14.48□□□□□ -0.09
APOC3P02656 SLC26A1-203ENST00000398520 1111 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
APOC3P02656 AC091799.1-201ENST00000422823 811 ntBASIC14.48□□□□□ -0.09
APOC3P02656 FAM72B-203ENST00000452190 748 ntTSL 3 BASIC14.48□□□□□ -0.09
APOC3P02656 GDF11-201ENST00000257868 8657 ntAPPRIS P2 TSL 1 (best) BASIC14.48□□□□□ -0.09
APOC3P02656 PCDHB6-202ENST00000622991 2608 ntTSL 2 BASIC14.48□□□□□ -0.09
APOC3P02656 PEPD-201ENST00000244137 1910 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
APOC3P02656 GPER1-206ENST00000617001 1900 ntTSL 5 BASIC14.48□□□□□ -0.09
APOC3P02656 LRRC57-202ENST00000397130 2384 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
APOC3P02656 PARD3B-204ENST00000406610 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
APOC3P02656 HOXB6-201ENST00000225648 1660 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
APOC3P02656 TRPC4AP-201ENST00000252015 3226 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
APOC3P02656 DMTN-202ENST00000358242 2772 ntTSL 5 BASIC14.48□□□□□ -0.09
APOC3P02656 MTHFD1L-203ENST00000367321 3604 ntAPPRIS P3 TSL 1 (best) BASIC14.48□□□□□ -0.09
APOC3P02656 MSRB1-201ENST00000361871 1423 ntAPPRIS P2 TSL 1 (best) BASIC14.48□□□□□ -0.09
APOC3P02656 SDF4-201ENST00000263741 2079 ntAPPRIS P3 TSL 1 (best) BASIC14.48□□□□□ -0.09
APOC3P02656 DCAF11-217ENST00000559115 2711 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
APOC3P02656 AC011473.4-202ENST00000250366 1602 ntAPPRIS P5 TSL 2 BASIC14.48□□□□□ -0.09
APOC3P02656 PRKD2-214ENST00000600194 2923 ntAPPRIS ALT2 TSL 2 BASIC14.48□□□□□ -0.09
APOC3P02656 SEMA5B-206ENST00000451055 4579 ntAPPRIS ALT2 TSL 2 BASIC14.48□□□□□ -0.09
APOC3P02656 MFSD1-202ENST00000392813 2244 ntTSL 2 BASIC14.47□□□□□ -0.09
APOC3P02656 CPNE6-201ENST00000397016 2235 ntAPPRIS P1 TSL 2 BASIC14.47□□□□□ -0.09
APOC3P02656 CPNE6-203ENST00000537691 2233 ntTSL 2 BASIC14.47□□□□□ -0.09
APOC3P02656 SLC4A7-210ENST00000440156 4120 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
APOC3P02656 PODN-202ENST00000371500 3287 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
APOC3P02656 LEF1-202ENST00000379951 3477 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
APOC3P02656 IRAK3-203ENST00000545837 1579 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
APOC3P02656 SF3A2-201ENST00000221494 1963 ntAPPRIS P2 TSL 1 (best) BASIC14.47□□□□□ -0.09
APOC3P02656 ZNF563-201ENST00000293725 2754 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
APOC3P02656 PHB2-203ENST00000535923 1515 ntAPPRIS P2 TSL 5 BASIC14.47□□□□□ -0.09
APOC3P02656 MGME1-202ENST00000377709 1936 ntTSL 2 BASIC14.47□□□□□ -0.09
APOC3P02656 AC092143.3-201ENST00000565150 1900 ntTSL 5 BASIC14.47□□□□□ -0.09
APOC3P02656 DYSF-201ENST00000258104 6796 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
APOC3P02656 DYSF-204ENST00000409582 6790 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
APOC3P02656 DYSF-210ENST00000413539 6769 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
APOC3P02656 HOXD3-201ENST00000249440 2303 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
APOC3P02656 SLC9A5-201ENST00000299798 3736 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
APOC3P02656 GHDC-201ENST00000301671 2650 ntAPPRIS P1 TSL 2 BASIC14.47□□□□□ -0.09
APOC3P02656 PIK3R6-203ENST00000614407 2265 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
APOC3P02656 SUMF2-202ENST00000342190 1876 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
APOC3P02656 HEIH-201ENST00000623091 1652 ntBASIC14.47□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 46 ms