Protein–RNA interactions for Protein: O95477

ABCA1, ATP-binding cassette sub-family A member 1, humanhuman

Predictions only

Length 2,261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA1O95477 SYNM-202ENST00000336292 7394 ntAPPRIS P4 TSL 1 (best) BASIC15.08■□□□□ 0
ABCA1O95477 IQCJ-SCHIP1-207ENST00000638749 2633 ntAPPRIS P3 TSL 1 (best) BASIC15.08■□□□□ 0
ABCA1O95477 STARD10-213ENST00000538536 1678 ntTSL 1 (best) BASIC15.08■□□□□ 0
ABCA1O95477 LONRF1-208ENST00000533751 3043 ntTSL 5 BASIC15.08■□□□□ 0
ABCA1O95477 HACE1-202ENST00000369125 3102 ntTSL 2 BASIC15.08■□□□□ 0
ABCA1O95477 NDRG2-227ENST00000554143 1980 ntAPPRIS ALT1 TSL 2 BASIC15.08■□□□□ 0
ABCA1O95477 REEP2-201ENST00000254901 2099 ntAPPRIS P3 TSL 1 (best) BASIC15.08■□□□□ 0
ABCA1O95477 ASB6-202ENST00000277459 2180 ntTSL 1 (best) BASIC15.08■□□□□ 0
ABCA1O95477 ADNP2-201ENST00000262198 5393 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
ABCA1O95477 C16orf58-202ENST00000430477 2471 ntAPPRIS P2 TSL 1 (best) BASIC15.08■□□□□ 0
ABCA1O95477 WWOX-214ENST00000566780 2482 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
ABCA1O95477 ABHD13-201ENST00000375898 5338 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
ABCA1O95477 HOXC4-201ENST00000303406 1524 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
ABCA1O95477 RHOV-201ENST00000220507 1705 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
ABCA1O95477 EGLN2-201ENST00000303961 2102 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
ABCA1O95477 PCOLCE-AS1-201ENST00000442166 2537 ntTSL 2 BASIC15.08■□□□□ 0
ABCA1O95477 BLOC1S3-201ENST00000433642 2601 ntAPPRIS P1 TSL 2 BASIC15.08■□□□□ 0
ABCA1O95477 DVL2-201ENST00000005340 3018 ntAPPRIS P2 TSL 1 (best) BASIC15.08■□□□□ 0
ABCA1O95477 SMG5-201ENST00000361813 4559 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
ABCA1O95477 RCAN3-205ENST00000436717 2574 ntTSL 3 BASIC15.08■□□□□ 0
ABCA1O95477 AL691447.2-201ENST00000454869 2162 ntTSL 2 BASIC15.08■□□□□ 0
ABCA1O95477 P2RX2-206ENST00000389110 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0
ABCA1O95477 BST1-201ENST00000265016 1480 ntAPPRIS P2 TSL 1 (best) BASIC15.08■□□□□ 0
ABCA1O95477 DDT-202ENST00000398344 713 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
ABCA1O95477 DDT-203ENST00000403754 569 ntTSL 3 BASIC15.08■□□□□ 0
ABCA1O95477 LBH-204ENST00000406087 559 ntTSL 4 BASIC15.08■□□□□ 0
ABCA1O95477 ANKRD54-202ENST00000406423 954 ntTSL 3 BASIC15.08■□□□□ 0
ABCA1O95477 DDT-206ENST00000430101 573 ntTSL 2 BASIC15.08■□□□□ 0
ABCA1O95477 LINC00882-201ENST00000473636 710 ntTSL 3 BASIC15.08■□□□□ 0
ABCA1O95477 AC093909.1-201ENST00000504731 1122 ntBASIC15.08■□□□□ 0
ABCA1O95477 SART3-203ENST00000546611 1184 ntBASIC15.08■□□□□ 0
ABCA1O95477 RLN3-202ENST00000585987 541 ntTSL 1 (best) BASIC15.08■□□□□ 0
ABCA1O95477 GPX4-212ENST00000616066 924 ntAPPRIS ALT1 TSL 5 BASIC15.08■□□□□ 0
ABCA1O95477 CPQ-201ENST00000220763 1947 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
ABCA1O95477 EDC3-214ENST00000568176 1825 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
ABCA1O95477 AL357033.4-201ENST00000617703 1807 ntBASIC15.07■□□□□ 0
ABCA1O95477 PANX1-201ENST00000227638 2769 ntAPPRIS P2 TSL 1 (best) BASIC15.07■□□□□ 0
ABCA1O95477 KRT8P50-201ENST00000562022 1438 ntBASIC15.07■□□□□ 0
ABCA1O95477 MXD4-201ENST00000337190 4056 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
ABCA1O95477 PRRG3-205ENST00000538575 1303 ntAPPRIS P1 TSL 5 BASIC15.07■□□□□ 0
ABCA1O95477 AL445433.2-201ENST00000425113 2544 ntTSL 2 BASIC15.07■□□□□ 0
ABCA1O95477 DNAJC28-204ENST00000617313 2237 ntAPPRIS P1 TSL 5 BASIC15.07■□□□□ 0
ABCA1O95477 STK25-201ENST00000316586 4619 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
ABCA1O95477 REEP4-202ENST00000334530 1476 ntTSL 1 (best) BASIC15.07■□□□□ 0
ABCA1O95477 PCDH10-201ENST00000264360 8489 ntAPPRIS P3 TSL 1 (best) BASIC15.07■□□□□ 0
ABCA1O95477 OCSTAMP-201ENST00000279028 2043 ntAPPRIS P1 TSL 5 BASIC15.07■□□□□ 0
ABCA1O95477 ETS1-208ENST00000535549 4594 ntTSL 1 (best) BASIC15.07■□□□□ 0
ABCA1O95477 AGTR1-201ENST00000349243 2356 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
ABCA1O95477 DPY30-201ENST00000295066 631 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
ABCA1O95477 DPY30-202ENST00000342166 708 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
ABCA1O95477 MRPS18A-201ENST00000372116 785 ntTSL 2 BASIC15.07■□□□□ 0
ABCA1O95477 FABP5-202ENST00000396359 986 ntTSL 5 BASIC15.07■□□□□ 0
ABCA1O95477 CHMP3-203ENST00000409225 1099 ntTSL 2 BASIC15.07■□□□□ 0
ABCA1O95477 TMEM213-202ENST00000413208 480 ntAPPRIS ALT2 TSL 3 BASIC15.07■□□□□ 0
ABCA1O95477 CR559946.1-201ENST00000453835 531 ntTSL 4 BASIC15.07■□□□□ 0
ABCA1O95477 TTLL12-204ENST00000494035 888 ntTSL 2 BASIC15.07■□□□□ 0
ABCA1O95477 REEP1-209ENST00000541910 969 ntTSL 2 BASIC15.07■□□□□ 0
ABCA1O95477 SPINT1-AS1-203ENST00000565315 629 ntTSL 2 BASIC15.07■□□□□ 0
ABCA1O95477 AC005336.2-201ENST00000593183 939 ntBASIC15.07■□□□□ 0
ABCA1O95477 CCL3-204ENST00000613922 778 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
ABCA1O95477 TMEM128-201ENST00000254742 1737 ntTSL 1 (best) BASIC15.07■□□□□ 0
ABCA1O95477 GMPR-201ENST00000259727 1515 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
ABCA1O95477 RAPH1-201ENST00000308091 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
ABCA1O95477 LINC00315-201ENST00000441947 2323 ntTSL 5 BASIC15.07■□□□□ 0
ABCA1O95477 PLEKHA2-206ENST00000521746 2127 ntTSL 5 BASIC15.07■□□□□ 0
ABCA1O95477 TSPAN32-201ENST00000182290 1318 ntAPPRIS P2 TSL 1 (best) BASIC15.07■□□□□ 0
ABCA1O95477 B3GNT3-202ENST00000595387 1349 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
ABCA1O95477 TSPAN32-217ENST00000612299 1301 ntTSL 5 BASIC15.07■□□□□ 0
ABCA1O95477 SLC38A10-201ENST00000288439 2708 ntAPPRIS P3 TSL 1 (best) BASIC15.07■□□□□ 0
ABCA1O95477 TMTC1-203ENST00000539277 2758 ntAPPRIS P2 TSL 1 (best) BASIC15.07■□□□□ 0
ABCA1O95477 FAR2P2-204ENST00000424873 2070 ntTSL 2 BASIC15.07■□□□□ 0
ABCA1O95477 FARSA-202ENST00000423140 1720 ntTSL 2 BASIC15.07■□□□□ 0
ABCA1O95477 RIOX2-201ENST00000333396 5347 ntAPPRIS ALT1 TSL 1 (best) BASIC15.07■□□□□ 0
ABCA1O95477 ALKBH5-203ENST00000541285 1605 ntTSL 1 (best) BASIC15.07■□□□□ 0
ABCA1O95477 CACNG7-201ENST00000222212 1016 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
ABCA1O95477 LAMTOR5-201ENST00000256644 868 ntTSL 1 (best) BASIC15.06■□□□□ 0
ABCA1O95477 MSANTD3-201ENST00000374885 786 ntTSL 2 BASIC15.06■□□□□ 0
ABCA1O95477 AP000355.1-201ENST00000432032 480 ntTSL 5 BASIC15.06■□□□□ 0
ABCA1O95477 LAMTOR5-204ENST00000483260 694 ntTSL 2 BASIC15.06■□□□□ 0
ABCA1O95477 AC009567.1-201ENST00000515071 525 ntTSL 4 BASIC15.06■□□□□ 0
ABCA1O95477 AC020934.1-201ENST00000588469 739 ntTSL 3 BASIC15.06■□□□□ 0
ABCA1O95477 LAMTOR5-206ENST00000602318 634 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
ABCA1O95477 AC114341.1-201ENST00000618070 349 ntBASIC15.06■□□□□ 0
ABCA1O95477 JAM2-202ENST00000400532 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
ABCA1O95477 TEPSIN-201ENST00000300714 2287 ntAPPRIS P2 TSL 1 (best) BASIC15.06■□□□□ 0
ABCA1O95477 STX6-201ENST00000258301 4851 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
ABCA1O95477 RETREG1-201ENST00000306320 3268 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
ABCA1O95477 YIF1B-204ENST00000392124 1404 ntTSL 1 (best) BASIC15.06■□□□□ 0
ABCA1O95477 NTRK1-206ENST00000524377 2432 ntAPPRIS P3 TSL 1 (best) BASIC15.06■□□□□ 0
ABCA1O95477 PIF1-205ENST00000559239 2677 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
ABCA1O95477 CHD1L-204ENST00000431239 2907 ntTSL 5 BASIC15.06■□□□□ 0
ABCA1O95477 ST3GAL3-206ENST00000351035 2377 ntTSL 5 BASIC15.06■□□□□ 0
ABCA1O95477 SORBS3-221ENST00000523965 2028 ntTSL 1 (best) BASIC15.06■□□□□ 0
ABCA1O95477 EPM2A-201ENST00000367519 3465 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
ABCA1O95477 TM2D1-201ENST00000294613 1250 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
ABCA1O95477 TM2D1-204ENST00000371180 1248 ntTSL 5 BASIC15.06■□□□□ 0
ABCA1O95477 DUSP15-204ENST00000398083 1212 ntTSL 5 BASIC15.06■□□□□ 0
ABCA1O95477 METTL21A-205ENST00000426075 1051 ntAPPRIS P1 TSL 2 BASIC15.06■□□□□ 0
ABCA1O95477 AFG3L1P-210ENST00000431757 569 ntTSL 4 BASIC15.06■□□□□ 0
ABCA1O95477 MIR503HG-203ENST00000441492 649 ntTSL 1 (best) BASIC15.06■□□□□ 0
Retrieved 100 of 98,524 protein–RNA pairs in 11.3 ms