Protein–RNA interactions for Protein: O95292

VAPB, Vesicle-associated membrane protein-associated protein B/C, humanhuman

Predictions only

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VAPBO95292 APEH-202ENST00000438011 2249 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
VAPBO95292 CHRD-202ENST00000348986 3155 ntAPPRIS ALT2 TSL 5 BASIC18.12■□□□□ 0.49
VAPBO95292 PROSER2-201ENST00000277570 3333 ntAPPRIS P2 TSL 1 (best) BASIC18.12■□□□□ 0.49
VAPBO95292 ARFGAP2-229ENST00000627920 2613 ntTSL 2 BASIC18.12■□□□□ 0.49
VAPBO95292 SH2D3C-203ENST00000373277 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
VAPBO95292 WWOX-203ENST00000406884 1701 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
VAPBO95292 ARSE-201ENST00000381134 1853 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
VAPBO95292 ZIC3-202ENST00000370606 1968 ntTSL 5 BASIC18.11■□□□□ 0.49
VAPBO95292 SLC22A11-202ENST00000377581 1975 ntTSL 5 BASIC18.11■□□□□ 0.49
VAPBO95292 PML-211ENST00000564428 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
VAPBO95292 AL109910.2-201ENST00000607733 1953 ntTSL 2 BASIC18.11■□□□□ 0.49
VAPBO95292 SMOC1-201ENST00000361956 2040 ntAPPRIS ALT1 TSL 1 (best) BASIC18.11■□□□□ 0.49
VAPBO95292 BPGM-202ENST00000393132 2051 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
VAPBO95292 PLD3-206ENST00000409587 2180 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
VAPBO95292 TMEM198-201ENST00000344458 2393 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
VAPBO95292 STAMBPL1-203ENST00000371926 2532 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
VAPBO95292 KCTD2-201ENST00000322444 3635 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
VAPBO95292 ANKRD20A18P-201ENST00000359341 492 ntBASIC18.11■□□□□ 0.49
VAPBO95292 CHTOP-202ENST00000368687 1094 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
VAPBO95292 AC113347.1-201ENST00000413321 391 ntBASIC18.11■□□□□ 0.49
VAPBO95292 AL137013.1-201ENST00000432946 1228 ntBASIC18.11■□□□□ 0.49
VAPBO95292 CNTD2-203ENST00000513948 787 ntAPPRIS ALT2 TSL 2 BASIC18.11■□□□□ 0.49
VAPBO95292 AL441883.1-201ENST00000566170 1045 ntBASIC18.11■□□□□ 0.49
VAPBO95292 AL031432.5-201ENST00000641059 760 ntBASIC18.11■□□□□ 0.49
VAPBO95292 LGALS8-AS1-201ENST00000487567 1457 ntBASIC18.11■□□□□ 0.49
VAPBO95292 AP001922.1-201ENST00000499390 1504 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
VAPBO95292 FCGRT-202ENST00000426395 1559 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
VAPBO95292 DOC2A-209ENST00000564979 1630 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
VAPBO95292 INVS-203ENST00000374921 1654 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
VAPBO95292 DCHS2-201ENST00000339452 5064 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
VAPBO95292 AC105285.1-202ENST00000499322 1866 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
VAPBO95292 ACTB-201ENST00000331789 1917 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
VAPBO95292 ADAM15-207ENST00000368413 1901 ntTSL 5 BASIC18.11■□□□□ 0.49
VAPBO95292 SEMA6C-209ENST00000613223 1950 ntTSL 5 BASIC18.11■□□□□ 0.49
VAPBO95292 NEU1-206ENST00000375631 2045 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
VAPBO95292 SLC39A1-210ENST00000617697 2214 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
VAPBO95292 CCDC137-201ENST00000329214 2468 ntAPPRIS P2 TSL 1 (best) BASIC18.11■□□□□ 0.49
VAPBO95292 VHL-202ENST00000345392 2696 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
VAPBO95292 AP001273.2-201ENST00000638767 2993 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
VAPBO95292 ZNF280D-205ENST00000559000 4726 ntAPPRIS ALT2 TSL 2 BASIC18.11■□□□□ 0.49
VAPBO95292 ELAC2-202ENST00000395962 2924 ntTSL 2 BASIC18.1■□□□□ 0.49
VAPBO95292 CRTC1-201ENST00000321949 2501 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
VAPBO95292 RNF166-203ENST00000541206 2419 ntTSL 2 BASIC18.1■□□□□ 0.49
VAPBO95292 LINC00602-201ENST00000629776 2065 ntBASIC18.1■□□□□ 0.49
VAPBO95292 GINM1-201ENST00000367419 2024 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
VAPBO95292 SULT1A1-204ENST00000395609 1871 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
VAPBO95292 GOLGA6L10-207ENST00000610657 1705 ntAPPRIS P2 TSL 2 BASIC18.1■□□□□ 0.49
VAPBO95292 STAC3-201ENST00000332782 1656 ntAPPRIS P1 TSL 2 BASIC18.1■□□□□ 0.49
VAPBO95292 FAM72C-201ENST00000369175 1658 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
VAPBO95292 FAM72B-207ENST00000619376 1659 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
VAPBO95292 AC006116.8-202ENST00000587620 1550 ntBASIC18.1■□□□□ 0.49
VAPBO95292 PLCB3-204ENST00000540288 4469 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
VAPBO95292 ZFC3H1-211ENST00000552037 1484 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
VAPBO95292 BIRC7-202ENST00000342412 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
VAPBO95292 CYB561D2-201ENST00000232508 1225 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
VAPBO95292 TERF1P1-201ENST00000311003 1181 ntBASIC18.1■□□□□ 0.49
VAPBO95292 VKORC1-202ENST00000319788 1077 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
VAPBO95292 RASA4DP-201ENST00000460726 1199 ntBASIC18.1■□□□□ 0.49
VAPBO95292 ENDOV-202ENST00000517295 908 ntTSL 3 BASIC18.1■□□□□ 0.49
VAPBO95292 DUTP2-201ENST00000519164 463 ntBASIC18.1■□□□□ 0.49
VAPBO95292 CYB561D2-210ENST00000607121 1004 ntTSL 2 BASIC18.1■□□□□ 0.49
VAPBO95292 RBM17-201ENST00000379888 2755 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
VAPBO95292 GAB1-201ENST00000262994 2648 ntAPPRIS ALT1 TSL 1 (best) BASIC18.1■□□□□ 0.49
VAPBO95292 CNST-202ENST00000366512 2422 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
VAPBO95292 IL18BP-207ENST00000404792 2172 ntAPPRIS P2 TSL 1 (best) BASIC18.1■□□□□ 0.49
VAPBO95292 SATB2-203ENST00000428695 2135 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
VAPBO95292 N4BP2L1-210ENST00000613078 2032 ntTSL 5 BASIC18.1■□□□□ 0.49
VAPBO95292 AP5S1-201ENST00000246041 1960 ntAPPRIS P1 TSL 4 BASIC18.1■□□□□ 0.49
VAPBO95292 PEX14-201ENST00000356607 1985 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
VAPBO95292 FBLN7-205ENST00000409903 1989 ntTSL 5 BASIC18.1■□□□□ 0.49
VAPBO95292 VPS26A-202ENST00000373382 3229 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
VAPBO95292 KLHDC3-201ENST00000244670 1903 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
VAPBO95292 HMGA1-201ENST00000311487 1920 ntAPPRIS P4 TSL 1 (best) BASIC18.1■□□□□ 0.49
VAPBO95292 FAM110A-202ENST00000304189 1856 ntAPPRIS P1 TSL 2 BASIC18.09■□□□□ 0.49
VAPBO95292 ESAM-201ENST00000278927 1826 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
VAPBO95292 FZR1-203ENST00000441788 5212 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
VAPBO95292 SPTBN4-202ENST00000352632 8676 ntAPPRIS P2 TSL 5 BASIC18.09■□□□□ 0.49
VAPBO95292 PDCD7-201ENST00000204549 2851 ntAPPRIS P2 TSL 1 (best) BASIC18.09■□□□□ 0.49
VAPBO95292 CDH24-201ENST00000267383 2873 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
VAPBO95292 VRK3-225ENST00000601912 1668 ntAPPRIS ALT2 TSL 5 BASIC18.09■□□□□ 0.49
VAPBO95292 RUBCNL-203ENST00000378787 2731 ntTSL 2 BASIC18.09■□□□□ 0.49
VAPBO95292 ARID3A-201ENST00000263620 5941 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
VAPBO95292 LBHD1-210ENST00000532208 1508 ntAPPRIS P2 TSL 5 BASIC18.09■□□□□ 0.49
VAPBO95292 OR6D1P-202ENST00000641007 5290 ntBASIC18.09■□□□□ 0.49
VAPBO95292 LINC00167-201ENST00000530583 1419 ntBASIC18.09■□□□□ 0.49
VAPBO95292 MGLL-204ENST00000434178 4941 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
VAPBO95292 KAT2A-201ENST00000225916 3109 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
VAPBO95292 ST3GAL3-205ENST00000347631 1324 ntTSL 5 BASIC18.09■□□□□ 0.49
VAPBO95292 CD7-201ENST00000312648 1281 ntAPPRIS P2 TSL 1 (best) BASIC18.09■□□□□ 0.49
VAPBO95292 BOLA3-202ENST00000327428 639 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
VAPBO95292 GUCA2B-201ENST00000372581 597 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
VAPBO95292 KRTAP5-10-201ENST00000398531 1176 ntAPPRIS P1 BASIC18.09■□□□□ 0.49
VAPBO95292 AC108025.1-201ENST00000453678 1058 ntTSL 5 BASIC18.09■□□□□ 0.49
VAPBO95292 NDUFS3-213ENST00000534716 1263 ntTSL 2 BASIC18.09■□□□□ 0.49
VAPBO95292 C16orf74-203ENST00000602675 744 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
VAPBO95292 AC139887.4-201ENST00000607877 719 ntBASIC18.09■□□□□ 0.49
VAPBO95292 RNASET2-213ENST00000611959 1124 ntTSL 5 BASIC18.09■□□□□ 0.49
VAPBO95292 AC011558.1-201ENST00000623459 338 ntBASIC18.09■□□□□ 0.49
VAPBO95292 C14orf180-202ENST00000410013 2009 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
VAPBO95292 CCT7-215ENST00000539919 2031 ntTSL 2 BASIC18.09■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 30.8 ms