Protein–RNA interactions for Protein: O94985

CLSTN1, Calsyntenin-1, humanhuman

Predictions only

Length 981 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN1O94985 ATP5D-207ENST00000591660 637 ntAPPRIS P1 TSL 3 BASIC19.95■□□□□ 0.78
CLSTN1O94985 CENPS-CORT-205ENST00000602787 571 ntAPPRIS P1 TSL 3 BASIC19.95■□□□□ 0.78
CLSTN1O94985 NDN-201ENST00000331837 1931 ntAPPRIS P1 BASIC19.95■□□□□ 0.78
CLSTN1O94985 FAM83A-202ENST00000518448 5393 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
CLSTN1O94985 PKP3-201ENST00000331563 2809 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
CLSTN1O94985 ARL5B-201ENST00000377275 7196 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
CLSTN1O94985 BDKRB1-202ENST00000553356 1526 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
CLSTN1O94985 GAS7-210ENST00000579158 1528 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
CLSTN1O94985 EVC2-202ENST00000344408 4390 ntAPPRIS P3 TSL 1 (best) BASIC19.95■□□□□ 0.78
CLSTN1O94985 GBGT1-203ENST00000372040 1980 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
CLSTN1O94985 INPP5J-205ENST00000404390 2215 ntAPPRIS P3 TSL 2 BASIC19.95■□□□□ 0.78
CLSTN1O94985 SYTL1-208ENST00000543823 2229 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
CLSTN1O94985 PDE3A-201ENST00000359062 7576 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
CLSTN1O94985 HEXB-207ENST00000511181 2021 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
CLSTN1O94985 CCDC187-205ENST00000638797 10126 ntAPPRIS ALT2 TSL 5 BASIC19.95■□□□□ 0.78
CLSTN1O94985 GAS7-203ENST00000432992 4970 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
CLSTN1O94985 KIAA0319L-201ENST00000325722 4789 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
CLSTN1O94985 GSEC-201ENST00000626810 2289 ntTSL 2 BASIC19.95■□□□□ 0.78
CLSTN1O94985 CRHR2-207ENST00000471646 2530 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
CLSTN1O94985 TPPP-201ENST00000360578 6022 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
CLSTN1O94985 CASKIN2-205ENST00000581870 1612 ntTSL 2 BASIC19.94■□□□□ 0.78
CLSTN1O94985 SEC61A2-201ENST00000298428 1893 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
CLSTN1O94985 LANCL3-201ENST00000378619 3063 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
CLSTN1O94985 JPH2-201ENST00000342272 1923 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
CLSTN1O94985 CHD1L-204ENST00000431239 2907 ntTSL 5 BASIC19.94■□□□□ 0.78
CLSTN1O94985 PTPN13-204ENST00000436978 8573 ntAPPRIS P4 TSL 5 BASIC19.94■□□□□ 0.78
CLSTN1O94985 TOX2-205ENST00000423191 1709 ntTSL 2 BASIC19.94■□□□□ 0.78
CLSTN1O94985 RARRES1-201ENST00000237696 1952 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
CLSTN1O94985 PDXK-219ENST00000621478 1967 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
CLSTN1O94985 NT5DC3-201ENST00000392876 7207 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
CLSTN1O94985 ISLR2-203ENST00000435464 4259 ntAPPRIS P1 TSL 2 BASIC19.94■□□□□ 0.78
CLSTN1O94985 NCF1B-201ENST00000423083 1516 ntTSL 2 BASIC19.94■□□□□ 0.78
CLSTN1O94985 TMEM160-201ENST00000253047 663 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
CLSTN1O94985 PAX3-201ENST00000258387 958 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
CLSTN1O94985 FUOM-201ENST00000278025 709 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
CLSTN1O94985 AL445472.1-201ENST00000452532 1007 ntTSL 2 BASIC19.94■□□□□ 0.78
CLSTN1O94985 NEK4P2-201ENST00000580004 1012 ntBASIC19.94■□□□□ 0.78
CLSTN1O94985 NAT14-202ENST00000587400 416 ntTSL 5 BASIC19.94■□□□□ 0.78
CLSTN1O94985 AC004076.1-201ENST00000596831 664 ntAPPRIS P1 TSL 2 BASIC19.94■□□□□ 0.78
CLSTN1O94985 KLK7-206ENST00000597707 1054 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
CLSTN1O94985 AL138966.2-201ENST00000621997 464 ntBASIC19.94■□□□□ 0.78
CLSTN1O94985 SLC35G2-202ENST00000446465 2060 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
CLSTN1O94985 EDC3-214ENST00000568176 1825 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
CLSTN1O94985 MYLKP1-201ENST00000509077 1580 ntBASIC19.94■□□□□ 0.78
CLSTN1O94985 ABO-203ENST00000611156 1577 ntAPPRIS ALT2 TSL 5 BASIC19.94■□□□□ 0.78
CLSTN1O94985 ARFIP2-204ENST00000445086 1300 ntTSL 2 BASIC19.94■□□□□ 0.78
CLSTN1O94985 HDAC5-201ENST00000225983 5326 ntAPPRIS P3 TSL 5 BASIC19.94■□□□□ 0.78
CLSTN1O94985 RAB4A-201ENST00000366690 2966 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
CLSTN1O94985 AL365232.1-201ENST00000423730 1636 ntAPPRIS P1 TSL 5 BASIC19.94■□□□□ 0.78
CLSTN1O94985 RNFT2-202ENST00000319176 2180 ntTSL 5 BASIC19.94■□□□□ 0.78
CLSTN1O94985 KLF6-204ENST00000469435 2169 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
CLSTN1O94985 RNFT2-209ENST00000622220 2176 ntTSL 5 BASIC19.94■□□□□ 0.78
CLSTN1O94985 TWIST2-202ENST00000612363 1404 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
CLSTN1O94985 PCED1A-201ENST00000356872 1706 ntTSL 2 BASIC19.93■□□□□ 0.78
CLSTN1O94985 SELENOF-201ENST00000331835 1781 ntAPPRIS P2 TSL 1 (best) BASIC19.93■□□□□ 0.78
CLSTN1O94985 PRKCD-201ENST00000330452 2680 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
CLSTN1O94985 DUSP8-201ENST00000331588 4455 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
CLSTN1O94985 LONRF1-208ENST00000533751 3043 ntTSL 5 BASIC19.93■□□□□ 0.78
CLSTN1O94985 ADORA2A-213ENST00000610595 2736 ntAPPRIS P1 TSL 2 BASIC19.93■□□□□ 0.78
CLSTN1O94985 MAGED2-213ENST00000627068 1811 ntAPPRIS ALT2 TSL 5 BASIC19.93■□□□□ 0.78
CLSTN1O94985 SLIT1-204ENST00000371070 4564 ntTSL 5 BASIC19.93■□□□□ 0.78
CLSTN1O94985 PLPP4-202ENST00000398250 1521 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
CLSTN1O94985 EGFL7-204ENST00000406555 1529 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
CLSTN1O94985 PCBP3-205ENST00000400310 2168 ntTSL 2 BASIC19.93■□□□□ 0.78
CLSTN1O94985 TBX20-201ENST00000408931 1871 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
CLSTN1O94985 GUCA1A-201ENST00000053469 1874 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
CLSTN1O94985 AFAP1-201ENST00000358461 7516 ntAPPRIS P3 TSL 2 BASIC19.93■□□□□ 0.78
CLSTN1O94985 PDX1-201ENST00000381033 2501 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
CLSTN1O94985 STK25-203ENST00000403346 2210 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
CLSTN1O94985 PIEZO1-202ENST00000327397 1246 ntTSL 2 BASIC19.93■□□□□ 0.78
CLSTN1O94985 MIEN1-201ENST00000394231 1006 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
CLSTN1O94985 AC103564.1-201ENST00000437330 562 ntTSL 5 BASIC19.93■□□□□ 0.78
CLSTN1O94985 FIS1-207ENST00000474120 915 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
CLSTN1O94985 YBX1P2-201ENST00000489612 999 ntBASIC19.93■□□□□ 0.78
CLSTN1O94985 PTP4A3-206ENST00000524028 963 ntTSL 5 BASIC19.93■□□□□ 0.78
CLSTN1O94985 GCSHP2-201ENST00000560971 527 ntBASIC19.93■□□□□ 0.78
CLSTN1O94985 PTGES2-214ENST00000617202 1344 ntTSL 5 BASIC19.93■□□□□ 0.78
CLSTN1O94985 SLC2A14-214ENST00000542505 1650 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
CLSTN1O94985 DENND3-201ENST00000262585 5438 ntAPPRIS P2 TSL 5 BASIC19.93■□□□□ 0.78
CLSTN1O94985 OSMR-202ENST00000502536 1740 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
CLSTN1O94985 SIDT2-217ENST00000532062 2143 ntTSL 2 BASIC19.93■□□□□ 0.78
CLSTN1O94985 CCNA1-202ENST00000440264 1758 ntAPPRIS P1 TSL 2 BASIC19.93■□□□□ 0.78
CLSTN1O94985 TAF3-201ENST00000344293 4872 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
CLSTN1O94985 RNF121-201ENST00000361756 2625 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
CLSTN1O94985 RUNX1T1-246ENST00000523629 7537 ntAPPRIS P3 TSL 5 BASIC19.92■□□□□ 0.78
CLSTN1O94985 CDX4-201ENST00000373514 1515 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
CLSTN1O94985 CYP51A1P1-201ENST00000492267 1507 ntBASIC19.92■□□□□ 0.78
CLSTN1O94985 SAMD11-212ENST00000617307 2314 ntAPPRIS ALT2 TSL 5 BASIC19.92■□□□□ 0.78
CLSTN1O94985 NF2-202ENST00000338641 6025 ntAPPRIS P4 TSL 1 (best) BASIC19.92■□□□□ 0.78
CLSTN1O94985 ZNF302-206ENST00000505242 2849 ntAPPRIS P3 TSL 1 (best) BASIC19.92■□□□□ 0.78
CLSTN1O94985 NFATC4-228ENST00000556759 2025 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
CLSTN1O94985 HRAS-201ENST00000311189 894 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
CLSTN1O94985 GUCA2B-201ENST00000372581 597 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
CLSTN1O94985 AP000593.1-201ENST00000393668 712 ntBASIC19.92■□□□□ 0.78
CLSTN1O94985 AC117947.1-201ENST00000427448 529 ntBASIC19.92■□□□□ 0.78
CLSTN1O94985 AC012618.3-202ENST00000440004 472 ntTSL 4 BASIC19.92■□□□□ 0.78
CLSTN1O94985 AL136307.1-201ENST00000454882 411 ntTSL 2 BASIC19.92■□□□□ 0.78
CLSTN1O94985 AL359075.1-203ENST00000462729 1002 ntBASIC19.92■□□□□ 0.78
CLSTN1O94985 WDR45-218ENST00000473974 1077 ntTSL 5 BASIC19.92■□□□□ 0.78
CLSTN1O94985 AC019068.1-202ENST00000483218 768 ntTSL 3 BASIC19.92■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 33 ms