Protein–RNA interactions for Protein: O75445

USH2A, Usherin, humanhuman

Predictions only

Length 5,202 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USH2AO75445 UROS-202ENST00000368778 1556 ntTSL 2 BASIC7.97□□□□□ -1.13
USH2AO75445 AC010198.1-201ENST00000500076 1552 ntTSL 1 (best) BASIC7.97□□□□□ -1.13
USH2AO75445 FBXL19-205ENST00000562319 2462 ntAPPRIS ALT2 TSL 2 BASIC7.97□□□□□ -1.13
USH2AO75445 FBXL20-205ENST00000583610 1739 ntAPPRIS P1 TSL 2 BASIC7.97□□□□□ -1.13
USH2AO75445 GNAS-203ENST00000306120 1878 ntBASIC7.97□□□□□ -1.13
USH2AO75445 TMEM109-202ENST00000536171 1959 ntAPPRIS P1 TSL 2 BASIC7.97□□□□□ -1.13
USH2AO75445 SPAG16-202ENST00000331683 2177 ntAPPRIS P1 TSL 1 (best) BASIC7.97□□□□□ -1.13
USH2AO75445 KCNN4-201ENST00000262888 2240 ntAPPRIS P1 TSL 1 (best) BASIC7.97□□□□□ -1.13
USH2AO75445 UBE2J2-201ENST00000347370 2387 ntTSL 3 BASIC7.97□□□□□ -1.13
USH2AO75445 PPP6R2P1-201ENST00000450880 1275 ntBASIC7.97□□□□□ -1.13
USH2AO75445 TMEM161B-AS1-212ENST00000513011 833 ntTSL 3 BASIC7.97□□□□□ -1.13
USH2AO75445 KRT8P48-201ENST00000515599 1220 ntBASIC7.97□□□□□ -1.13
USH2AO75445 COQ6-210ENST00000554920 649 ntTSL 3 BASIC7.97□□□□□ -1.13
USH2AO75445 CERNA1-201ENST00000559779 908 ntTSL 3 BASIC7.97□□□□□ -1.13
USH2AO75445 SNX1-214ENST00000625244 324 ntTSL 5 BASIC7.97□□□□□ -1.13
USH2AO75445 AL358472.5-202ENST00000641448 1267 ntBASIC7.97□□□□□ -1.13
USH2AO75445 CLK3-202ENST00000395066 2621 ntTSL 1 (best) BASIC7.97□□□□□ -1.13
USH2AO75445 REM2-202ENST00000536884 1331 ntTSL 2 BASIC7.97□□□□□ -1.13
USH2AO75445 RAB37-208ENST00000402449 1560 ntAPPRIS P3 TSL 2 BASIC7.97□□□□□ -1.13
USH2AO75445 LEXM-201ENST00000358193 1777 ntAPPRIS P3 TSL 1 (best) BASIC7.97□□□□□ -1.13
USH2AO75445 CACNB3-202ENST00000536187 1872 ntTSL 2 BASIC7.97□□□□□ -1.13
USH2AO75445 ADAD1-202ENST00000388724 1912 ntTSL 1 (best) BASIC7.97□□□□□ -1.13
USH2AO75445 TMEM150C-201ENST00000449862 1990 ntAPPRIS P1 TSL 1 (best) BASIC7.97□□□□□ -1.13
USH2AO75445 TMEM206-205ENST00000535273 2119 ntTSL 2 BASIC7.97□□□□□ -1.13
USH2AO75445 THEM6-201ENST00000336138 2259 ntAPPRIS P1 TSL 1 (best) BASIC7.97□□□□□ -1.13
USH2AO75445 CPT2-203ENST00000635862 2319 ntTSL 5 BASIC7.97□□□□□ -1.13
USH2AO75445 OTOP3-201ENST00000328801 2363 ntAPPRIS P1 TSL 2 BASIC7.97□□□□□ -1.13
USH2AO75445 ST7-201ENST00000265437 2899 ntTSL 1 (best) BASIC7.97□□□□□ -1.13
USH2AO75445 ACBD4-201ENST00000321854 1806 ntAPPRIS P1 TSL 1 (best) BASIC7.96□□□□□ -1.13
USH2AO75445 NDUFA12-201ENST00000327772 635 ntAPPRIS P1 TSL 1 (best) BASIC7.96□□□□□ -1.13
USH2AO75445 IDS-202ENST00000370441 1399 ntTSL 1 (best) BASIC7.96□□□□□ -1.13
USH2AO75445 KRTAP6-3-201ENST00000391624 636 ntAPPRIS P1 BASIC7.96□□□□□ -1.13
USH2AO75445 SEPT2-203ENST00000391971 3315 ntAPPRIS P1 TSL 1 (best) BASIC7.96□□□□□ -1.13
USH2AO75445 AP000695.1-201ENST00000429588 893 ntTSL 3 BASIC7.96□□□□□ -1.13
USH2AO75445 LCN10-203ENST00000474369 564 ntAPPRIS ALT2 TSL 1 (best) BASIC7.96□□□□□ -1.13
USH2AO75445 MPZL1-209ENST00000474859 630 ntTSL 1 (best) BASIC7.96□□□□□ -1.13
USH2AO75445 APBB2-208ENST00000504305 1274 ntTSL 5 BASIC7.96□□□□□ -1.13
USH2AO75445 ATXN2-AS-201ENST00000547021 485 ntTSL 2 BASIC7.96□□□□□ -1.13
USH2AO75445 CD63-210ENST00000550776 870 ntTSL 5 BASIC7.96□□□□□ -1.13
USH2AO75445 INO80E-210ENST00000567705 880 ntTSL 3 BASIC7.96□□□□□ -1.13
USH2AO75445 ARL16-202ENST00000570561 768 ntTSL 2 BASIC7.96□□□□□ -1.13
USH2AO75445 AL139099.5-201ENST00000635274 300 ntBASIC7.96□□□□□ -1.13
USH2AO75445 AC084121.4-201ENST00000641598 221 ntBASIC7.96□□□□□ -1.13
USH2AO75445 AF228730.8-201ENST00000642140 221 ntBASIC7.96□□□□□ -1.13
USH2AO75445 AC132938.6-201ENST00000623828 1655 ntBASIC7.96□□□□□ -1.13
USH2AO75445 ASL-204ENST00000395331 1538 ntTSL 5 BASIC7.96□□□□□ -1.13
USH2AO75445 INHA-201ENST00000243786 1468 ntAPPRIS P1 TSL 1 (best) BASIC7.96□□□□□ -1.13
USH2AO75445 ZNF554-201ENST00000317243 2736 ntAPPRIS P1 TSL 1 (best) BASIC7.96□□□□□ -1.13
USH2AO75445 C16orf92-201ENST00000300575 895 ntAPPRIS P2 TSL 1 (best) BASIC7.96□□□□□ -1.13
USH2AO75445 AC079776.1-201ENST00000401540 1152 ntBASIC7.96□□□□□ -1.13
USH2AO75445 AC100858.3-202ENST00000533496 553 ntTSL 4 BASIC7.96□□□□□ -1.13
USH2AO75445 BAD-207ENST00000544785 525 ntTSL 3 BASIC7.96□□□□□ -1.13
USH2AO75445 TVP23B-206ENST00000574226 1080 ntAPPRIS ALT1 TSL 1 (best) BASIC7.96□□□□□ -1.13
USH2AO75445 AL390754.1-201ENST00000619088 582 ntBASIC7.96□□□□□ -1.13
USH2AO75445 MED17-221ENST00000639724 2317 ntTSL 5 BASIC7.96□□□□□ -1.13
USH2AO75445 PIF1-202ENST00000333425 2278 ntTSL 1 (best) BASIC7.96□□□□□ -1.13
USH2AO75445 ACADS-201ENST00000242592 1950 ntAPPRIS P1 TSL 1 (best) BASIC7.96□□□□□ -1.13
USH2AO75445 LBX2-AS1-201ENST00000548978 1852 ntTSL 3 BASIC7.96□□□□□ -1.13
USH2AO75445 SMPDL3A-203ENST00000539041 1755 ntTSL 2 BASIC7.96□□□□□ -1.13
USH2AO75445 DDX55-205ENST00000538744 1735 ntTSL 5 BASIC7.96□□□□□ -1.13
USH2AO75445 CCDC78-201ENST00000293889 1611 ntAPPRIS P2 TSL 1 (best) BASIC7.96□□□□□ -1.14
USH2AO75445 SPSB1-201ENST00000328089 3120 ntAPPRIS P1 TSL 1 (best) BASIC7.96□□□□□ -1.14
USH2AO75445 NHLRC1-201ENST00000340650 2248 ntAPPRIS P1 BASIC7.96□□□□□ -1.14
USH2AO75445 PDLIM5-205ENST00000380180 2020 ntTSL 1 (best) BASIC7.96□□□□□ -1.14
USH2AO75445 GOSR2-201ENST00000225567 1245 ntTSL 1 (best) BASIC7.96□□□□□ -1.14
USH2AO75445 JTB-201ENST00000271843 1287 ntAPPRIS P1 TSL 1 (best) BASIC7.96□□□□□ -1.14
USH2AO75445 ICOSLG-201ENST00000344330 1009 ntAPPRIS ALT2 TSL 1 (best) BASIC7.96□□□□□ -1.14
USH2AO75445 TNNT3-204ENST00000381558 1258 ntAPPRIS ALT2 TSL 5 BASIC7.96□□□□□ -1.14
USH2AO75445 NUDT1-206ENST00000397049 714 ntAPPRIS P1 TSL 1 (best) BASIC7.96□□□□□ -1.14
USH2AO75445 AL020989.1-201ENST00000422979 469 ntBASIC7.96□□□□□ -1.14
USH2AO75445 KRT17P7-201ENST00000451704 1104 ntBASIC7.96□□□□□ -1.14
USH2AO75445 SERF1A-207ENST00000512649 846 ntTSL 2 BASIC7.96□□□□□ -1.14
USH2AO75445 AC023355.1-201ENST00000560323 752 ntTSL 3 BASIC7.96□□□□□ -1.14
USH2AO75445 MIR4538-201ENST00000581377 78 ntBASIC7.96□□□□□ -1.14
USH2AO75445 CU104787.1-201ENST00000624155 288 ntTSL 1 (best) BASIC7.96□□□□□ -1.14
USH2AO75445 NF2-203ENST00000353887 1845 ntTSL 1 (best) BASIC7.96□□□□□ -1.14
USH2AO75445 INTS11-202ENST00000411962 1832 ntTSL 5 BASIC7.96□□□□□ -1.14
USH2AO75445 PFN2-203ENST00000452853 1780 ntAPPRIS ALT1 TSL 1 (best) BASIC7.96□□□□□ -1.14
USH2AO75445 RASL12-201ENST00000220062 2640 ntAPPRIS P1 TSL 1 (best) BASIC7.96□□□□□ -1.14
USH2AO75445 COLEC11-206ENST00000403096 1557 ntTSL 1 (best) BASIC7.96□□□□□ -1.14
USH2AO75445 EARS2-210ENST00000564501 2027 ntTSL 5 BASIC7.96□□□□□ -1.14
USH2AO75445 TMED3-201ENST00000299705 1475 ntAPPRIS P1 TSL 1 (best) BASIC7.96□□□□□ -1.14
USH2AO75445 PAIP1-201ENST00000306846 2782 ntTSL 1 (best) BASIC7.96□□□□□ -1.14
USH2AO75445 TRMT6-202ENST00000453074 2239 ntTSL 2 BASIC7.96□□□□□ -1.14
USH2AO75445 ST3GAL3-219ENST00000372374 2170 ntTSL 5 BASIC7.96□□□□□ -1.14
USH2AO75445 ERCC1-201ENST00000013807 1278 ntTSL 1 (best) BASIC7.96□□□□□ -1.14
USH2AO75445 SPDYE14P-201ENST00000442619 822 ntBASIC7.96□□□□□ -1.14
USH2AO75445 MTCL1P1-201ENST00000446207 792 ntBASIC7.96□□□□□ -1.14
USH2AO75445 TMEM14B-212ENST00000475942 992 ntTSL 2 BASIC7.96□□□□□ -1.14
USH2AO75445 AC068228.2-201ENST00000522383 777 ntTSL 3 BASIC7.96□□□□□ -1.14
USH2AO75445 AC034102.5-201ENST00000548731 540 ntTSL 4 BASIC7.96□□□□□ -1.14
USH2AO75445 AC090515.4-201ENST00000558042 450 ntTSL 3 BASIC7.96□□□□□ -1.14
USH2AO75445 AC008677.1-201ENST00000519230 1561 ntBASIC7.96□□□□□ -1.14
USH2AO75445 PLEKHG2-202ENST00000409797 2205 ntAPPRIS ALT2 TSL 2 BASIC7.96□□□□□ -1.14
USH2AO75445 SERPINB5-201ENST00000382771 2783 ntAPPRIS P1 TSL 1 (best) BASIC7.96□□□□□ -1.14
USH2AO75445 AC068888.1-203ENST00000546566 1650 ntTSL 2 BASIC7.96□□□□□ -1.14
USH2AO75445 FOXS1-201ENST00000375978 1319 ntAPPRIS P1 BASIC7.96□□□□□ -1.14
USH2AO75445 ZNF138-201ENST00000307355 1141 ntAPPRIS ALT2 TSL 4 BASIC7.96□□□□□ -1.14
USH2AO75445 KRT18P41-201ENST00000518924 1277 ntBASIC7.96□□□□□ -1.14
USH2AO75445 AD001527.2-201ENST00000622994 785 ntBASIC7.96□□□□□ -1.14
Retrieved 100 of 98,524 protein–RNA pairs in 27.5 ms