Protein–RNA interactions for Protein: O60294

LCMT2, tRNA wybutosine-synthesizing protein 4, humanhuman

Known RBP Predictions only

Length 686 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LCMT2O60294 NRBP1-203ENST00000379852 2163 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
LCMT2O60294 TFEB-206ENST00000403298 2162 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
LCMT2O60294 AL133373.2-201ENST00000623187 2828 ntBASIC17.22■□□□□ 0.35
LCMT2O60294 ADRA1A-201ENST00000276393 2281 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
LCMT2O60294 IL34-201ENST00000288098 1607 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
LCMT2O60294 FPGS-201ENST00000373225 2278 ntTSL 2 BASIC17.22■□□□□ 0.35
LCMT2O60294 TTLL3-209ENST00000426895 2767 ntAPPRIS P2 TSL 2 BASIC17.22■□□□□ 0.35
LCMT2O60294 PGLS-201ENST00000252603 1028 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
LCMT2O60294 PHF12-201ENST00000268756 2957 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
LCMT2O60294 MRPL20-201ENST00000344843 721 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
LCMT2O60294 HIST1H2AI-201ENST00000358739 503 ntAPPRIS P1 BASIC17.22■□□□□ 0.35
LCMT2O60294 INSL3-202ENST00000379695 899 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
LCMT2O60294 DDT-202ENST00000398344 713 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
LCMT2O60294 DDT-203ENST00000403754 569 ntTSL 3 BASIC17.22■□□□□ 0.35
LCMT2O60294 SSR4P1-202ENST00000429427 967 ntTSL 5 BASIC17.22■□□□□ 0.35
LCMT2O60294 DDT-206ENST00000430101 573 ntTSL 2 BASIC17.22■□□□□ 0.35
LCMT2O60294 DMKN-215ENST00000451297 1111 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
LCMT2O60294 AC073111.4-202ENST00000486297 585 ntTSL 4 BASIC17.22■□□□□ 0.35
LCMT2O60294 AC004771.4-201ENST00000576752 474 ntTSL 5 BASIC17.22■□□□□ 0.35
LCMT2O60294 RTBDN-213ENST00000592204 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
LCMT2O60294 AC011511.2-201ENST00000592893 918 ntTSL 3 BASIC17.22■□□□□ 0.35
LCMT2O60294 AC010463.1-201ENST00000596542 1207 ntAPPRIS P1 TSL 2 BASIC17.22■□□□□ 0.35
LCMT2O60294 IGHV3-41-201ENST00000613121 348 ntBASIC17.22■□□□□ 0.35
LCMT2O60294 AL807752.6-202ENST00000622933 765 ntAPPRIS P5 TSL 3 BASIC17.22■□□□□ 0.35
LCMT2O60294 AC124864.1-201ENST00000623408 392 ntBASIC17.22■□□□□ 0.35
LCMT2O60294 AGPAT2-205ENST00000538402 1357 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
LCMT2O60294 AC004832.3-202ENST00000439838 1470 ntAPPRIS P1 TSL 2 BASIC17.22■□□□□ 0.35
LCMT2O60294 MAZ-212ENST00000568282 1593 ntTSL 5 BASIC17.22■□□□□ 0.35
LCMT2O60294 PPT2-247ENST00000375143 1754 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
LCMT2O60294 PRSS23-201ENST00000280258 4015 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
LCMT2O60294 PANX1-201ENST00000227638 2769 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
LCMT2O60294 CDH23-212ENST00000616684 4814 ntTSL 5 BASIC17.22■□□□□ 0.35
LCMT2O60294 MCTP2-205ENST00000543482 1422 ntTSL 2 BASIC17.21■□□□□ 0.35
LCMT2O60294 PML-205ENST00000395132 1738 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
LCMT2O60294 RNPS1-205ENST00000561718 1806 ntTSL 3 BASIC17.21■□□□□ 0.35
LCMT2O60294 DCLK1-203ENST00000379892 2101 ntTSL 5 BASIC17.21■□□□□ 0.35
LCMT2O60294 NUTM2F-202ENST00000341207 2516 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
LCMT2O60294 NUTM2G-202ENST00000372322 2516 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
LCMT2O60294 RREB1-203ENST00000379933 5826 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
LCMT2O60294 SPTBN4-204ENST00000392025 8671 ntAPPRIS ALT1 TSL 5 BASIC17.21■□□□□ 0.35
LCMT2O60294 PTPRJ-202ENST00000440289 3158 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
LCMT2O60294 OLFM1-201ENST00000252854 2591 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
LCMT2O60294 DUOXA1-201ENST00000267803 1996 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
LCMT2O60294 TBC1D10C-209ENST00000542590 1659 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
LCMT2O60294 SDC2-202ENST00000518385 1583 ntTSL 5 BASIC17.21■□□□□ 0.35
LCMT2O60294 ELANE-201ENST00000263621 920 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
LCMT2O60294 KCNK7-202ENST00000342202 1283 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
LCMT2O60294 MTCL1P1-201ENST00000446207 792 ntBASIC17.21■□□□□ 0.35
LCMT2O60294 GUSBP12-201ENST00000513727 720 ntBASIC17.21■□□□□ 0.35
LCMT2O60294 FBXL22-204ENST00000638704 729 ntAPPRIS ALT2 TSL 2 BASIC17.21■□□□□ 0.35
LCMT2O60294 SMC4-201ENST00000344722 5356 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
LCMT2O60294 HOTAIR-201ENST00000424518 2421 ntTSL 5 BASIC17.21■□□□□ 0.35
LCMT2O60294 PIANP-204ENST00000540656 2432 ntAPPRIS P3 TSL 2 BASIC17.21■□□□□ 0.35
LCMT2O60294 NUDT4-202ENST00000415493 4839 ntAPPRIS ALT1 TSL 1 (best) BASIC17.21■□□□□ 0.35
LCMT2O60294 MSC-201ENST00000325509 2023 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
LCMT2O60294 AL031658.1-201ENST00000449519 2013 ntTSL 2 BASIC17.21■□□□□ 0.35
LCMT2O60294 C12orf65-202ENST00000366329 1901 ntAPPRIS P2 TSL 2 BASIC17.21■□□□□ 0.35
LCMT2O60294 FAM213B-201ENST00000378424 2765 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
LCMT2O60294 AP003717.1-202ENST00000537019 1412 ntTSL 5 BASIC17.21■□□□□ 0.34
LCMT2O60294 KDELC1-201ENST00000376004 2060 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
LCMT2O60294 RNF146-213ENST00000610153 2070 ntAPPRIS ALT1 TSL 2 BASIC17.2■□□□□ 0.34
LCMT2O60294 PITPNC1-201ENST00000299954 6359 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
LCMT2O60294 MFGE8-202ENST00000268151 1752 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
LCMT2O60294 MRPS5-201ENST00000272418 1652 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
LCMT2O60294 HNF1A-202ENST00000400024 2337 ntTSL 2 BASIC17.2■□□□□ 0.34
LCMT2O60294 C6orf141-206ENST00000529246 1450 ntAPPRIS P1 BASIC17.2■□□□□ 0.34
LCMT2O60294 BAG3-201ENST00000369085 2571 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
LCMT2O60294 NFKB2-201ENST00000189444 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC17.2■□□□□ 0.34
LCMT2O60294 GLYCTK-201ENST00000305690 1371 ntTSL 5 BASIC17.2■□□□□ 0.34
LCMT2O60294 SYNE4-201ENST00000324444 1354 ntAPPRIS P3 TSL 5 BASIC17.2■□□□□ 0.34
LCMT2O60294 SMARCC1-201ENST00000254480 6375 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
LCMT2O60294 MRPS24-203ENST00000418740 743 ntTSL 2 BASIC17.2■□□□□ 0.34
LCMT2O60294 AP002383.4-201ENST00000442518 975 ntBASIC17.2■□□□□ 0.34
LCMT2O60294 DYDC2-206ENST00000444807 1173 ntAPPRIS P3 TSL 3 BASIC17.2■□□□□ 0.34
LCMT2O60294 LINC01128-207ENST00000449005 874 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
LCMT2O60294 TSSC2-201ENST00000450217 709 ntBASIC17.2■□□□□ 0.34
LCMT2O60294 NT5C2-211ENST00000470299 249 ntTSL 5 BASIC17.2■□□□□ 0.34
LCMT2O60294 BOC-211ENST00000484034 1286 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
LCMT2O60294 LINC02199-203ENST00000510229 496 ntTSL 3 BASIC17.2■□□□□ 0.34
LCMT2O60294 CSRP1-214ENST00000531916 890 ntTSL 5 BASIC17.2■□□□□ 0.34
LCMT2O60294 ANAPC11-217ENST00000579978 575 ntAPPRIS P1 TSL 2 BASIC17.2■□□□□ 0.34
LCMT2O60294 AC090616.6-201ENST00000582640 721 ntBASIC17.2■□□□□ 0.34
LCMT2O60294 LINC01785-201ENST00000598042 1112 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
LCMT2O60294 SPINK2-207ENST00000631082 392 ntTSL 5 BASIC17.2■□□□□ 0.34
LCMT2O60294 SPACA6-213ENST00000637797 1073 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
LCMT2O60294 ANKRD20A8P-203ENST00000641373 517 ntBASIC17.2■□□□□ 0.34
LCMT2O60294 NCOA6-207ENST00000616167 3271 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
LCMT2O60294 PAX4-204ENST00000463946 1613 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
LCMT2O60294 SLC25A48-201ENST00000274513 1880 ntTSL 2 BASIC17.2■□□□□ 0.34
LCMT2O60294 CACNB3-202ENST00000536187 1872 ntTSL 2 BASIC17.2■□□□□ 0.34
LCMT2O60294 APCDD1-201ENST00000355285 3809 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
LCMT2O60294 GTPBP2-202ENST00000307126 2933 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
LCMT2O60294 FNBP1-203ENST00000443566 5227 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
LCMT2O60294 NDUFA10-202ENST00000307300 1313 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
LCMT2O60294 OGFOD2-211ENST00000538628 1696 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
LCMT2O60294 NUDT10-202ENST00000376006 2001 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
LCMT2O60294 ANKRD6-204ENST00000447838 2968 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
LCMT2O60294 AC027312.1-201ENST00000523591 1571 ntTSL 5 BASIC17.19■□□□□ 0.34
LCMT2O60294 UBQLN4-201ENST00000368309 3576 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
LCMT2O60294 HGFAC-201ENST00000382774 2159 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 26 ms