Protein–RNA interactions for Protein: O43707

ACTN4, Alpha-actinin-4, humanhuman

Known RBP Predictions only

Length 911 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN4O43707 CADM1-222ENST00000616271 1246 ntTSL 5 BASIC20.2■□□□□ 0.82
ACTN4O43707 LRRFIP2-209ENST00000440230 1989 ntTSL 5 BASIC20.2■□□□□ 0.82
ACTN4O43707 TCIRG1-201ENST00000265686 2677 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
ACTN4O43707 RIN1-201ENST00000311320 2693 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
ACTN4O43707 FAM124A-202ENST00000322475 4761 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
ACTN4O43707 TMEM45B-201ENST00000281441 2234 ntAPPRIS P1 TSL 2 BASIC20.2■□□□□ 0.82
ACTN4O43707 AC002310.5-201ENST00000569360 1515 ntAPPRIS P1 TSL 2 BASIC20.2■□□□□ 0.82
ACTN4O43707 AC020916.1-201ENST00000587762 1774 ntBASIC20.2■□□□□ 0.82
ACTN4O43707 PODN-203ENST00000395871 2744 ntTSL 5 BASIC20.2■□□□□ 0.82
ACTN4O43707 SERPINB6-208ENST00000616722 2047 ntTSL 2 BASIC20.2■□□□□ 0.82
ACTN4O43707 PTGES2-214ENST00000617202 1344 ntTSL 5 BASIC20.2■□□□□ 0.82
ACTN4O43707 TMEM183A-201ENST00000367242 3019 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
ACTN4O43707 ESAM-201ENST00000278927 1826 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
ACTN4O43707 LINC01554-202ENST00000436592 2052 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
ACTN4O43707 CORO6-210ENST00000580212 2345 ntTSL 5 BASIC20.2■□□□□ 0.82
ACTN4O43707 DPYSL3-202ENST00000398514 5309 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
ACTN4O43707 CTSB-202ENST00000353047 3875 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
ACTN4O43707 CMTM3-214ENST00000567572 1934 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
ACTN4O43707 RNF2-201ENST00000367509 1677 ntTSL 2 BASIC20.19■□□□□ 0.82
ACTN4O43707 KIF25-AS1-201ENST00000414364 1420 ntTSL 2 BASIC20.19■□□□□ 0.82
ACTN4O43707 MIS18BP1-212ENST00000627697 1950 ntTSL 5 BASIC20.19■□□□□ 0.82
ACTN4O43707 TNFAIP2-201ENST00000333007 4175 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
ACTN4O43707 TXNRD2-218ENST00000542719 2024 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
ACTN4O43707 SELENOF-201ENST00000331835 1781 ntAPPRIS P2 TSL 1 (best) BASIC20.19■□□□□ 0.82
ACTN4O43707 MRC2-201ENST00000303375 5988 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
ACTN4O43707 LRRC20-203ENST00000358141 2924 ntTSL 2 BASIC20.19■□□□□ 0.82
ACTN4O43707 AL391807.1-203ENST00000604392 2365 ntBASIC20.19■□□□□ 0.82
ACTN4O43707 SPDYE15P-201ENST00000424157 909 ntBASIC20.19■□□□□ 0.82
ACTN4O43707 AC234772.2-201ENST00000456532 375 ntTSL 3 BASIC20.19■□□□□ 0.82
ACTN4O43707 MYD88-211ENST00000495303 976 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
ACTN4O43707 AP003396.1-201ENST00000501918 507 ntTSL 5 BASIC20.19■□□□□ 0.82
ACTN4O43707 AC034232.1-201ENST00000506026 1064 ntBASIC20.19■□□□□ 0.82
ACTN4O43707 RPS20-210ENST00000523936 899 ntTSL 2 BASIC20.19■□□□□ 0.82
ACTN4O43707 MRPL52-210ENST00000555345 895 ntTSL 2 BASIC20.19■□□□□ 0.82
ACTN4O43707 C16orf74-203ENST00000602675 744 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
ACTN4O43707 C6orf48-210ENST00000614363 748 ntAPPRIS P1 TSL 5 BASIC20.19■□□□□ 0.82
ACTN4O43707 EIF5A-204ENST00000416016 1336 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
ACTN4O43707 CSK-202ENST00000439220 1900 ntAPPRIS P1 TSL 2 BASIC20.19■□□□□ 0.82
ACTN4O43707 APOA5-203ENST00000542499 1929 ntAPPRIS P1 TSL 5 BASIC20.19■□□□□ 0.82
ACTN4O43707 C8orf34-206ENST00000518698 2223 ntAPPRIS P2 TSL 2 BASIC20.19■□□□□ 0.82
ACTN4O43707 AC104809.2-201ENST00000418218 2274 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
ACTN4O43707 ZNF655-203ENST00000357864 1370 ntTSL 2 BASIC20.19■□□□□ 0.82
ACTN4O43707 CHRNB4-202ENST00000412074 1355 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
ACTN4O43707 STRN4-201ENST00000263280 3210 ntAPPRIS P3 TSL 1 (best) BASIC20.19■□□□□ 0.82
ACTN4O43707 CCT7-215ENST00000539919 2031 ntTSL 2 BASIC20.19■□□□□ 0.82
ACTN4O43707 PYCR1-217ENST00000629768 1740 ntTSL 5 BASIC20.19■□□□□ 0.82
ACTN4O43707 WDR45-205ENST00000376358 1432 ntTSL 2 BASIC20.19■□□□□ 0.82
ACTN4O43707 FFAR2-201ENST00000246549 2051 ntAPPRIS P1 BASIC20.18■□□□□ 0.82
ACTN4O43707 PRKAG1-206ENST00000548065 2071 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
ACTN4O43707 HARS-201ENST00000307633 1780 ntTSL 2 BASIC20.18■□□□□ 0.82
ACTN4O43707 SLC16A5-203ENST00000538213 1842 ntAPPRIS ALT2 TSL 2 BASIC20.18■□□□□ 0.82
ACTN4O43707 SDC1-203ENST00000403076 1523 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
ACTN4O43707 ITGA6-201ENST00000264107 5618 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
ACTN4O43707 LMNA-208ENST00000448611 1943 ntTSL 2 BASIC20.18■□□□□ 0.82
ACTN4O43707 CHTOP-202ENST00000368687 1094 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
ACTN4O43707 VASH1-204ENST00000554743 1096 ntTSL 3 BASIC20.18■□□□□ 0.82
ACTN4O43707 AC004076.1-201ENST00000596831 664 ntAPPRIS P1 TSL 2 BASIC20.18■□□□□ 0.82
ACTN4O43707 AC097493.4-201ENST00000641197 219 ntBASIC20.18■□□□□ 0.82
ACTN4O43707 CD99P1-204ENST00000435581 2788 ntTSL 2 BASIC20.18■□□□□ 0.82
ACTN4O43707 FGFR3-205ENST00000440486 4287 ntAPPRIS P3 TSL 5 BASIC20.18■□□□□ 0.82
ACTN4O43707 ZBED3-AS1-208ENST00000512001 1668 ntTSL 3 BASIC20.18■□□□□ 0.82
ACTN4O43707 MARK4-210ENST00000620044 2105 ntTSL 5 BASIC20.18■□□□□ 0.82
ACTN4O43707 RABL2A-204ENST00000393167 2179 ntAPPRIS P3 TSL 1 (best) BASIC20.18■□□□□ 0.82
ACTN4O43707 FAM20A-205ENST00000592554 2955 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
ACTN4O43707 PSMG4-209ENST00000473000 4603 ntTSL 2 BASIC20.18■□□□□ 0.82
ACTN4O43707 ECE2-201ENST00000324557 1823 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
ACTN4O43707 PPP1R16A-202ENST00000435887 2273 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
ACTN4O43707 ARNTL-205ENST00000403510 2745 ntTSL 2 BASIC20.18■□□□□ 0.82
ACTN4O43707 ZFC3H1-211ENST00000552037 1484 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
ACTN4O43707 KRT89P-201ENST00000620027 1478 ntBASIC20.18■□□□□ 0.82
ACTN4O43707 AANAT-201ENST00000250615 1913 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
ACTN4O43707 UQCC3-201ENST00000377953 1947 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
ACTN4O43707 SNX1-208ENST00000559844 1971 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
ACTN4O43707 ETNK2-203ENST00000367202 2434 ntAPPRIS P3 TSL 1 (best) BASIC20.17■□□□□ 0.82
ACTN4O43707 CNNM3-201ENST00000305510 3447 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
ACTN4O43707 ZBTB16-201ENST00000335953 2523 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
ACTN4O43707 ARHGEF19-201ENST00000270747 3029 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
ACTN4O43707 COL18A1-204ENST00000400337 5436 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
ACTN4O43707 NDUFS7-210ENST00000539480 1743 ntTSL 2 BASIC20.17■□□□□ 0.82
ACTN4O43707 LRRC27-214ENST00000625755 1738 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
ACTN4O43707 SLC22A18-203ENST00000380574 1755 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
ACTN4O43707 SCT-201ENST00000176195 366 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
ACTN4O43707 CD7-201ENST00000312648 1281 ntAPPRIS P2 TSL 1 (best) BASIC20.17■□□□□ 0.82
ACTN4O43707 HES7-201ENST00000317814 678 ntAPPRIS P3 TSL 1 (best) BASIC20.17■□□□□ 0.82
ACTN4O43707 APCDD1-201ENST00000355285 3809 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
ACTN4O43707 MNX1-AS1-201ENST00000480284 1041 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
ACTN4O43707 AC019068.1-202ENST00000483218 768 ntTSL 3 BASIC20.17■□□□□ 0.82
ACTN4O43707 AC091133.2-201ENST00000505903 428 ntTSL 3 BASIC20.17■□□□□ 0.82
ACTN4O43707 AL442663.3-201ENST00000554737 1000 ntTSL 3 BASIC20.17■□□□□ 0.82
ACTN4O43707 PAQR4-204ENST00000574988 869 ntTSL 2 BASIC20.17■□□□□ 0.82
ACTN4O43707 TEN1-204ENST00000588202 862 ntTSL 3 BASIC20.17■□□□□ 0.82
ACTN4O43707 AC024563.2-201ENST00000603282 481 ntBASIC20.17■□□□□ 0.82
ACTN4O43707 SCPEP1-216ENST00000631024 444 ntTSL 5 BASIC20.17■□□□□ 0.82
ACTN4O43707 NDUFAB1-201ENST00000007516 717 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
ACTN4O43707 SUPT20H-203ENST00000360252 2843 ntAPPRIS P3 TSL 1 (best) BASIC20.17■□□□□ 0.82
ACTN4O43707 GBX2-203ENST00000551105 1307 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
ACTN4O43707 MIR4300HG-201ENST00000500502 1397 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
ACTN4O43707 SPAG9-202ENST00000357122 4761 ntAPPRIS P2 TSL 1 (best) BASIC20.17■□□□□ 0.82
ACTN4O43707 EWSR1-202ENST00000332035 1989 ntAPPRIS ALT2 TSL 2 BASIC20.17■□□□□ 0.82
ACTN4O43707 AC073508.3-201ENST00000619697 1419 ntBASIC20.17■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 28.9 ms