Protein–RNA interactions for Protein: O43567

RNF13, E3 ubiquitin-protein ligase RNF13, humanhuman

Predictions only

Length 381 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF13O43567 CDH24-204ENST00000487137 3438 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
RNF13O43567 ASL-204ENST00000395331 1538 ntTSL 5 BASIC16.42■□□□□ 0.22
RNF13O43567 DGCR6L-201ENST00000248879 1154 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
RNF13O43567 IFI6-201ENST00000339145 822 ntAPPRIS P4 TSL 2 BASIC16.42■□□□□ 0.22
RNF13O43567 GCHFR-202ENST00000558467 785 ntTSL 2 BASIC16.42■□□□□ 0.22
RNF13O43567 CMTM3-210ENST00000565666 769 ntTSL 3 BASIC16.42■□□□□ 0.22
RNF13O43567 NT5C-210ENST00000582160 860 ntTSL 2 BASIC16.42■□□□□ 0.22
RNF13O43567 PTGIR-204ENST00000596260 1009 ntTSL 2 BASIC16.42■□□□□ 0.22
RNF13O43567 BPIFB4-201ENST00000375483 2159 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
RNF13O43567 RAP1GDS1-201ENST00000264572 1686 ntTSL 5 BASIC16.42■□□□□ 0.22
RNF13O43567 SLC35G2-202ENST00000446465 2060 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
RNF13O43567 CHAC1-202ENST00000446533 1849 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
RNF13O43567 UNC5D-202ENST00000404895 3252 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
RNF13O43567 WIPI1-202ENST00000546360 1575 ntTSL 2 BASIC16.42■□□□□ 0.22
RNF13O43567 ACBD5-201ENST00000375888 1747 ntAPPRIS ALT2 TSL 5 BASIC16.42■□□□□ 0.22
RNF13O43567 POLR1D-221ENST00000637180 2262 ntTSL 5 BASIC16.42■□□□□ 0.22
RNF13O43567 MPP2-206ENST00000518766 1896 ntTSL 2 BASIC16.42■□□□□ 0.22
RNF13O43567 HOTAIR-201ENST00000424518 2421 ntTSL 5 BASIC16.41■□□□□ 0.22
RNF13O43567 ICA1-208ENST00000407906 1615 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
RNF13O43567 CLYBL-203ENST00000376355 6771 ntAPPRIS P1 TSL 2 BASIC16.41■□□□□ 0.22
RNF13O43567 DENND5B-201ENST00000354285 3132 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
RNF13O43567 LRCH2-201ENST00000317135 4929 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
RNF13O43567 SETD3-202ENST00000331768 2878 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
RNF13O43567 EDEM1-204ENST00000445686 1363 ntTSL 2 BASIC16.41■□□□□ 0.22
RNF13O43567 OPN5-204ENST00000489301 1931 ntAPPRIS ALT2 TSL 5 BASIC16.41■□□□□ 0.22
RNF13O43567 FO681492.1-203ENST00000622861 1362 ntAPPRIS ALT2 TSL 5 BASIC16.41■□□□□ 0.22
RNF13O43567 GAREM2-202ENST00000407684 5138 ntTSL 2 BASIC16.41■□□□□ 0.22
RNF13O43567 HAUS8-202ENST00000448593 1545 ntAPPRIS ALT2 TSL 5 BASIC16.41■□□□□ 0.22
RNF13O43567 C1orf159-205ENST00000421241 1841 ntAPPRIS P3 TSL 2 BASIC16.41■□□□□ 0.22
RNF13O43567 PTS-201ENST00000280362 935 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
RNF13O43567 TMEM88B-201ENST00000378821 492 ntAPPRIS P1 TSL 2 BASIC16.41■□□□□ 0.22
RNF13O43567 DHRS4L2-202ENST00000397071 1117 ntTSL 2 BASIC16.41■□□□□ 0.22
RNF13O43567 AP000523.1-201ENST00000398242 1049 ntBASIC16.41■□□□□ 0.22
RNF13O43567 AC087499.1-201ENST00000418141 1075 ntBASIC16.41■□□□□ 0.22
RNF13O43567 UNC5B-AS1-201ENST00000447119 647 ntTSL 2 BASIC16.41■□□□□ 0.22
RNF13O43567 AC104596.1-202ENST00000507486 759 ntTSL 3 BASIC16.41■□□□□ 0.22
RNF13O43567 MFGE8-203ENST00000542878 1172 ntTSL 2 BASIC16.41■□□□□ 0.22
RNF13O43567 C14orf144-201ENST00000553757 537 ntTSL 4 BASIC16.41■□□□□ 0.22
RNF13O43567 MTHFS-202ENST00000559722 948 ntTSL 2 BASIC16.41■□□□□ 0.22
RNF13O43567 ETFA-216ENST00000560726 942 ntTSL 3 BASIC16.41■□□□□ 0.22
RNF13O43567 YPEL3-207ENST00000566134 761 ntTSL 5 BASIC16.41■□□□□ 0.22
RNF13O43567 KLK7-206ENST00000597707 1054 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
RNF13O43567 AC022154.1-201ENST00000600303 766 ntTSL 3 BASIC16.41■□□□□ 0.22
RNF13O43567 ST20-MTHFS-203ENST00000615374 679 ntAPPRIS P1 TSL 3 BASIC16.41■□□□□ 0.22
RNF13O43567 OBP2B-205ENST00000618116 961 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
RNF13O43567 AC008735.6-201ENST00000635964 1292 ntAPPRIS P1 TSL 2 BASIC16.41■□□□□ 0.22
RNF13O43567 MARCH1-203ENST00000503008 5877 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
RNF13O43567 NYX-201ENST00000342595 2713 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
RNF13O43567 TPRA1-204ENST00000450633 1865 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
RNF13O43567 CEP120-201ENST00000306467 4900 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
RNF13O43567 C18orf8-201ENST00000269221 2162 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
RNF13O43567 SLC30A2-202ENST00000374278 3097 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
RNF13O43567 ADGRG2-209ENST00000379876 4779 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
RNF13O43567 CBS-201ENST00000352178 2583 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
RNF13O43567 ELN-202ENST00000320399 2274 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
RNF13O43567 CAMK2B-204ENST00000350811 2292 ntAPPRIS P4 TSL 2 BASIC16.4■□□□□ 0.22
RNF13O43567 FFAR2-202ENST00000599180 2133 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
RNF13O43567 FLJ13224-201ENST00000313737 1514 ntBASIC16.4■□□□□ 0.22
RNF13O43567 ATXN7-210ENST00000487717 3683 ntAPPRIS P3 TSL 5 BASIC16.4■□□□□ 0.22
RNF13O43567 BACE1-201ENST00000313005 6326 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
RNF13O43567 PTPRU-202ENST00000373779 5579 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
RNF13O43567 DHX33-201ENST00000225296 5618 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
RNF13O43567 UBE2Q2-201ENST00000267938 3130 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
RNF13O43567 EXO5-202ENST00000358527 1892 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
RNF13O43567 SGSM2-202ENST00000426855 4734 ntAPPRIS ALT1 TSL 1 (best) BASIC16.4■□□□□ 0.22
RNF13O43567 ANK1-206ENST00000348036 622 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
RNF13O43567 TMEM53-201ENST00000372235 890 ntTSL 2 BASIC16.4■□□□□ 0.22
RNF13O43567 SLC25A48-202ENST00000412661 1148 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
RNF13O43567 SLC25A48-204ENST00000433282 1111 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
RNF13O43567 C7orf49-209ENST00000483029 596 ntTSL 2 BASIC16.4■□□□□ 0.22
RNF13O43567 SMIM1-203ENST00000561886 491 ntTSL 2 BASIC16.4■□□□□ 0.22
RNF13O43567 NEK4P2-201ENST00000580004 1012 ntBASIC16.4■□□□□ 0.22
RNF13O43567 ZNF134-203ENST00000600344 483 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
RNF13O43567 AC145285.6-201ENST00000604632 637 ntBASIC16.4■□□□□ 0.22
RNF13O43567 AC009477.2-201ENST00000635976 171 ntAPPRIS P1 BASIC16.4■□□□□ 0.22
RNF13O43567 AC092865.7-201ENST00000641832 219 ntBASIC16.4■□□□□ 0.22
RNF13O43567 CLASRP-203ENST00000391953 1941 ntTSL 2 BASIC16.4■□□□□ 0.22
RNF13O43567 CCDC88C-203ENST00000389856 1641 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
RNF13O43567 CASKIN2-205ENST00000581870 1612 ntTSL 2 BASIC16.4■□□□□ 0.22
RNF13O43567 ACD-215ENST00000620761 1483 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
RNF13O43567 TLE2-219ENST00000591529 2483 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
RNF13O43567 SH2D3C-213ENST00000629203 2478 ntTSL 2 BASIC16.4■□□□□ 0.22
RNF13O43567 MYBPH-201ENST00000255416 1805 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
RNF13O43567 CHRD-202ENST00000348986 3155 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
RNF13O43567 ZNF589-203ENST00000427617 1677 ntTSL 2 BASIC16.4■□□□□ 0.22
RNF13O43567 C22orf39-205ENST00000542103 1523 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
RNF13O43567 LINC00957-202ENST00000441052 2590 ntTSL 2 BASIC16.39■□□□□ 0.22
RNF13O43567 TAX1BP3-201ENST00000225525 1377 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
RNF13O43567 DUSP4-201ENST00000240100 5537 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
RNF13O43567 AL645608.8-201ENST00000606034 2086 ntBASIC16.39■□□□□ 0.21
RNF13O43567 JMJD4-207ENST00000620518 2432 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
RNF13O43567 LRCH3-201ENST00000334859 2258 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
RNF13O43567 INPP5A-203ENST00000368594 2967 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
RNF13O43567 RGL3-202ENST00000393423 2278 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
RNF13O43567 PDE9A-213ENST00000398236 1776 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
RNF13O43567 GMDS-208ENST00000530927 1440 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
RNF13O43567 TMEM234-201ENST00000309777 1082 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
RNF13O43567 ELF3-AS1-202ENST00000419190 788 ntTSL 2 BASIC16.39■□□□□ 0.21
RNF13O43567 ECEL1P3-201ENST00000427961 737 ntBASIC16.39■□□□□ 0.21
RNF13O43567 AC037459.1-202ENST00000430850 531 ntAPPRIS P1 TSL 4 BASIC16.39■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 43.2 ms