Protein–RNA interactions for Protein: O43196

MSH5, MutS protein homolog 5, humanhuman

Predictions only

Length 834 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5O43196 MTND2P31-201ENST00000512602 616 ntBASIC24.54■■□□□ 1.52
MSH5O43196 RPL28-210ENST00000560583 1204 ntTSL 2 BASIC24.54■■□□□ 1.52
MSH5O43196 AC129507.2-201ENST00000572499 748 ntTSL 3 BASIC24.54■■□□□ 1.52
MSH5O43196 TSTD3-202ENST00000636394 336 ntAPPRIS ALT2 TSL 3 BASIC24.54■■□□□ 1.52
MSH5O43196 ZNF652-202ENST00000430262 4701 ntAPPRIS P1 TSL 1 (best) BASIC24.54■■□□□ 1.52
MSH5O43196 NTMT1-203ENST00000372483 1315 ntAPPRIS P1 TSL 1 (best) BASIC24.54■■□□□ 1.52
MSH5O43196 AMACR-206ENST00000502637 1598 ntTSL 5 BASIC24.54■■□□□ 1.52
MSH5O43196 PGAM1-201ENST00000334828 1830 ntAPPRIS P1 TSL 1 (best) BASIC24.54■■□□□ 1.52
MSH5O43196 LINC00472-203ENST00000426635 2958 ntTSL 2 BASIC24.54■■□□□ 1.52
MSH5O43196 LINC02381-201ENST00000508564 1369 ntTSL 1 (best) BASIC24.54■■□□□ 1.52
MSH5O43196 TTYH3-201ENST00000258796 4840 ntAPPRIS P1 TSL 1 (best) BASIC24.54■■□□□ 1.52
MSH5O43196 NFIX-202ENST00000360105 5459 ntTSL 5 BASIC24.53■■□□□ 1.52
MSH5O43196 RAB40C-205ENST00000539661 2609 ntAPPRIS P1 TSL 3 BASIC24.53■■□□□ 1.52
MSH5O43196 ZBED3-AS1-208ENST00000512001 1668 ntTSL 3 BASIC24.53■■□□□ 1.52
MSH5O43196 ADGRG2-210ENST00000379878 4803 ntTSL 1 (best) BASIC24.53■■□□□ 1.52
MSH5O43196 SRCIN1-213ENST00000617146 7058 ntAPPRIS P2 TSL 1 (best) BASIC24.53■■□□□ 1.52
MSH5O43196 IKZF1-209ENST00000438033 1748 ntTSL 2 BASIC24.53■■□□□ 1.52
MSH5O43196 POC1A-202ENST00000394970 1999 ntTSL 1 (best) BASIC24.53■■□□□ 1.52
MSH5O43196 KIAA1324L-207ENST00000444627 3527 ntTSL 5 BASIC24.53■■□□□ 1.52
MSH5O43196 PCDHGC5-202ENST00000610789 2763 ntAPPRIS ALT2 BASIC24.53■■□□□ 1.52
MSH5O43196 C4orf47-201ENST00000378850 1134 ntAPPRIS P1 TSL 1 (best) BASIC24.53■■□□□ 1.52
MSH5O43196 BMS1P13-201ENST00000417301 885 ntBASIC24.53■■□□□ 1.52
MSH5O43196 BMS1P11-201ENST00000442351 885 ntBASIC24.53■■□□□ 1.52
MSH5O43196 BMS1P9-201ENST00000457640 885 ntBASIC24.53■■□□□ 1.52
MSH5O43196 AC093752.2-201ENST00000506942 573 ntTSL 5 BASIC24.53■■□□□ 1.52
MSH5O43196 DRAP1-205ENST00000527119 581 ntTSL 5 BASIC24.53■■□□□ 1.52
MSH5O43196 AP003396.3-201ENST00000530918 778 ntTSL 5 BASIC24.53■■□□□ 1.52
MSH5O43196 NAPSB-203ENST00000531692 561 ntTSL 2 BASIC24.53■■□□□ 1.52
MSH5O43196 AC135279.1-201ENST00000543493 504 ntBASIC24.53■■□□□ 1.52
MSH5O43196 YPEL3-204ENST00000563788 730 ntAPPRIS P1 TSL 3 BASIC24.53■■□□□ 1.52
MSH5O43196 C16orf74-203ENST00000602675 744 ntAPPRIS ALT2 TSL 1 (best) BASIC24.53■■□□□ 1.52
MSH5O43196 C16orf74-206ENST00000602766 832 ntAPPRIS ALT2 TSL 3 BASIC24.53■■□□□ 1.52
MSH5O43196 CTXN3-204ENST00000620385 1208 ntAPPRIS P1 BASIC24.53■■□□□ 1.52
MSH5O43196 LINC00592-202ENST00000640420 768 ntTSL 5 BASIC24.53■■□□□ 1.52
MSH5O43196 FBXL5-202ENST00000412094 2837 ntAPPRIS ALT1 TSL 1 (best) BASIC24.53■■□□□ 1.52
MSH5O43196 SPATA18-202ENST00000419395 2816 ntTSL 2 BASIC24.53■■□□□ 1.52
MSH5O43196 DBNL-210ENST00000448521 1808 ntAPPRIS ALT1 TSL 1 (best) BASIC24.53■■□□□ 1.52
MSH5O43196 PEX16-202ENST00000378750 1335 ntAPPRIS P1 TSL 1 (best) BASIC24.53■■□□□ 1.52
MSH5O43196 EIF2B5-201ENST00000273783 2655 ntAPPRIS P1 TSL 1 (best) BASIC24.53■■□□□ 1.52
MSH5O43196 FAM217A-208ENST00000639338 1929 ntTSL 5 BASIC24.53■■□□□ 1.52
MSH5O43196 GPR157-201ENST00000377411 5265 ntAPPRIS P1 TSL 1 (best) BASIC24.53■■□□□ 1.52
MSH5O43196 IL17RC-215ENST00000455057 2244 ntAPPRIS ALT2 TSL 1 (best) BASIC24.53■■□□□ 1.52
MSH5O43196 UBAP1-203ENST00000379186 2524 ntTSL 5 BASIC24.53■■□□□ 1.52
MSH5O43196 ANKRD65-201ENST00000427211 1976 ntTSL 1 (best) BASIC24.53■■□□□ 1.52
MSH5O43196 SLC47A2-201ENST00000325411 2258 ntAPPRIS P3 TSL 1 (best) BASIC24.52■■□□□ 1.52
MSH5O43196 EPS8L2-205ENST00000526198 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC24.52■■□□□ 1.52
MSH5O43196 PARVG-206ENST00000444313 3523 ntAPPRIS P1 TSL 1 (best) BASIC24.52■■□□□ 1.52
MSH5O43196 SLC2A8-215ENST00000610552 1763 ntTSL 3 BASIC24.52■■□□□ 1.52
MSH5O43196 GRM6-201ENST00000231188 6143 ntAPPRIS P1 TSL 2 BASIC24.52■■□□□ 1.52
MSH5O43196 ST3GAL3-219ENST00000372374 2170 ntTSL 5 BASIC24.52■■□□□ 1.52
MSH5O43196 KLHDC4-201ENST00000270583 1886 ntAPPRIS P3 TSL 1 (best) BASIC24.52■■□□□ 1.52
MSH5O43196 INTS11-250ENST00000620829 1862 ntTSL 2 BASIC24.52■■□□□ 1.52
MSH5O43196 MTMR12-201ENST00000264934 2215 ntTSL 2 BASIC24.52■■□□□ 1.52
MSH5O43196 RPA2-201ENST00000313433 1237 ntTSL 1 (best) BASIC24.52■■□□□ 1.52
MSH5O43196 HBZP1-201ENST00000354915 429 ntBASIC24.52■■□□□ 1.52
MSH5O43196 GAD2-202ENST00000376248 680 ntTSL 5 BASIC24.52■■□□□ 1.52
MSH5O43196 SSR1P1-201ENST00000407630 814 ntBASIC24.52■■□□□ 1.52
MSH5O43196 AC012513.1-201ENST00000417481 784 ntTSL 2 BASIC24.52■■□□□ 1.52
MSH5O43196 LINC01297-202ENST00000453395 624 ntTSL 5 BASIC24.52■■□□□ 1.52
MSH5O43196 BARHL1-202ENST00000542090 1197 ntAPPRIS P1 TSL 1 (best) BASIC24.52■■□□□ 1.52
MSH5O43196 ZNF667-AS1-206ENST00000591797 535 ntTSL 5 BASIC24.52■■□□□ 1.52
MSH5O43196 IGFLR1-209ENST00000592537 1195 ntAPPRIS P2 TSL 1 (best) BASIC24.52■■□□□ 1.52
MSH5O43196 AC004076.1-201ENST00000596831 664 ntAPPRIS P1 TSL 2 BASIC24.52■■□□□ 1.52
MSH5O43196 MALAT1-215ENST00000619449 794 ntTSL 3 BASIC24.52■■□□□ 1.52
MSH5O43196 ISG15-203ENST00000624697 788 ntAPPRIS ALT2 TSL 3 BASIC24.52■■□□□ 1.52
MSH5O43196 MFSD11-220ENST00000621483 2850 ntAPPRIS P1 TSL 1 (best) BASIC24.52■■□□□ 1.52
MSH5O43196 THOC6-207ENST00000574549 1300 ntTSL 1 (best) BASIC24.52■■□□□ 1.52
MSH5O43196 LINC01837-201ENST00000590021 1320 ntTSL 5 BASIC24.52■■□□□ 1.52
MSH5O43196 LRRC43-201ENST00000339777 2028 ntAPPRIS P2 TSL 5 BASIC24.52■■□□□ 1.52
MSH5O43196 KCNH1-214ENST00000640566 1365 ntTSL 1 (best) BASIC24.52■■□□□ 1.52
MSH5O43196 MMEL1-201ENST00000378412 2849 ntAPPRIS P1 TSL 2 BASIC24.52■■□□□ 1.52
MSH5O43196 IL15-201ENST00000296545 2472 ntAPPRIS P1 TSL 1 (best) BASIC24.52■■□□□ 1.52
MSH5O43196 TMEM235-203ENST00000550981 1786 ntTSL 2 BASIC24.52■■□□□ 1.52
MSH5O43196 PUF60-202ENST00000349157 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC24.51■■□□□ 1.51
MSH5O43196 AC013268.5-201ENST00000454928 1959 ntTSL 2 BASIC24.51■■□□□ 1.51
MSH5O43196 ZNF131-206ENST00000505606 3209 ntAPPRIS P1 TSL 5 BASIC24.51■■□□□ 1.51
MSH5O43196 NCOA6-207ENST00000616167 3271 ntAPPRIS ALT2 TSL 5 BASIC24.51■■□□□ 1.51
MSH5O43196 GHDC-202ENST00000414034 2496 ntTSL 2 BASIC24.51■■□□□ 1.51
MSH5O43196 MAEA-201ENST00000264750 2058 ntTSL 2 BASIC24.51■■□□□ 1.51
MSH5O43196 FAM131A-204ENST00000418281 1664 ntTSL 5 BASIC24.51■■□□□ 1.51
MSH5O43196 HIST1H2AI-201ENST00000358739 503 ntAPPRIS P1 BASIC24.51■■□□□ 1.51
MSH5O43196 IFNA14-201ENST00000380222 990 ntAPPRIS P1 BASIC24.51■■□□□ 1.51
MSH5O43196 NECTIN3-AS1-204ENST00000476301 568 ntTSL 4 BASIC24.51■■□□□ 1.51
MSH5O43196 AC092597.1-201ENST00000487352 616 ntBASIC24.51■■□□□ 1.51
MSH5O43196 LIAS-205ENST00000509519 1005 ntTSL 2 BASIC24.51■■□□□ 1.51
MSH5O43196 GLRB-205ENST00000512619 728 ntTSL 3 BASIC24.51■■□□□ 1.51
MSH5O43196 MTCO1P47-201ENST00000523889 1271 ntBASIC24.51■■□□□ 1.51
MSH5O43196 LYVE1-203ENST00000529598 936 ntTSL 2 BASIC24.51■■□□□ 1.51
MSH5O43196 AC079385.1-202ENST00000549203 569 ntTSL 4 BASIC24.51■■□□□ 1.51
MSH5O43196 AC021066.1-201ENST00000549788 647 ntTSL 3 BASIC24.51■■□□□ 1.51
MSH5O43196 AL023806.2-201ENST00000603042 263 ntBASIC24.51■■□□□ 1.51
MSH5O43196 AC215522.2-202ENST00000633163 1143 ntTSL 5 BASIC24.51■■□□□ 1.51
MSH5O43196 NRXN2-201ENST00000265459 6621 ntAPPRIS P3 TSL 5 BASIC24.51■■□□□ 1.51
MSH5O43196 ADRA1A-201ENST00000276393 2281 ntAPPRIS P1 TSL 1 (best) BASIC24.51■■□□□ 1.51
MSH5O43196 RABL2B-205ENST00000395595 2428 ntAPPRIS ALT2 TSL 1 (best) BASIC24.51■■□□□ 1.51
MSH5O43196 MMD2-202ENST00000404774 2415 ntTSL 1 (best) BASIC24.51■■□□□ 1.51
MSH5O43196 SLC35A3-222ENST00000640715 1989 ntTSL 5 BASIC24.51■■□□□ 1.51
MSH5O43196 SDC2-202ENST00000518385 1583 ntTSL 5 BASIC24.5■■□□□ 1.51
MSH5O43196 RTN1-203ENST00000395090 1609 ntTSL 2 BASIC24.5■■□□□ 1.51
MSH5O43196 SERPINE2-201ENST00000258405 2195 ntAPPRIS P3 TSL 1 (best) BASIC24.5■■□□□ 1.51
Retrieved 100 of 98,524 protein–RNA pairs in 45.2 ms