Protein–RNA interactions for Protein: O15417

TNRC18, Trinucleotide repeat-containing gene 18 protein, humanhuman

Predicted RBP Predictions only

Length 2,968 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNRC18O15417 MRPL28-202ENST00000389675 865 ntAPPRIS P1 TSL 3 BASIC19.39■□□□□ 0.7
TNRC18O15417 CAPG-205ENST00000409921 1195 ntTSL 1 (best) BASIC19.39■□□□□ 0.7
TNRC18O15417 AL157832.1-201ENST00000428273 495 ntTSL 2 BASIC19.39■□□□□ 0.7
TNRC18O15417 AC020659.2-202ENST00000512295 513 ntTSL 2 BASIC19.39■□□□□ 0.7
TNRC18O15417 VASH1-204ENST00000554743 1096 ntTSL 3 BASIC19.39■□□□□ 0.7
TNRC18O15417 PGLYRP1-201ENST00000008938 720 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
TNRC18O15417 FADS2-209ENST00000521849 1703 ntTSL 1 (best) BASIC19.39■□□□□ 0.7
TNRC18O15417 FARSA-207ENST00000588025 2057 ntTSL 5 BASIC19.39■□□□□ 0.69
TNRC18O15417 AC100757.3-201ENST00000622361 1406 ntBASIC19.39■□□□□ 0.69
TNRC18O15417 TP73-202ENST00000354437 2140 ntTSL 5 BASIC19.39■□□□□ 0.69
TNRC18O15417 SLC39A1-209ENST00000537590 2022 ntTSL 2 BASIC19.39■□□□□ 0.69
TNRC18O15417 EPS8L1-202ENST00000245618 2198 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
TNRC18O15417 FBXL20-205ENST00000583610 1739 ntAPPRIS P1 TSL 2 BASIC19.39■□□□□ 0.69
TNRC18O15417 COPS6-202ENST00000418625 1107 ntAPPRIS ALT2 TSL 5 BASIC19.39■□□□□ 0.69
TNRC18O15417 AC127070.2-201ENST00000424075 555 ntTSL 2 BASIC19.39■□□□□ 0.69
TNRC18O15417 SPDYE14P-201ENST00000442619 822 ntBASIC19.39■□□□□ 0.69
TNRC18O15417 GS1-24F4.2-201ENST00000500823 1110 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
TNRC18O15417 AC079140.1-201ENST00000508039 487 ntBASIC19.39■□□□□ 0.69
TNRC18O15417 PPT2-244ENST00000324816 2053 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
TNRC18O15417 MYBL2-201ENST00000217026 2639 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
TNRC18O15417 NOTCH2NL-201ENST00000362074 1874 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.69
TNRC18O15417 ZNF420-201ENST00000304239 1945 ntTSL 2 BASIC19.38■□□□□ 0.69
TNRC18O15417 SGF29-201ENST00000317058 1153 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
TNRC18O15417 AC243562.1-201ENST00000560672 389 ntBASIC19.38■□□□□ 0.69
TNRC18O15417 NAT9-224ENST00000583757 583 ntTSL 3 BASIC19.38■□□□□ 0.69
TNRC18O15417 LSR-203ENST00000360798 1963 ntTSL 2 BASIC19.38■□□□□ 0.69
TNRC18O15417 ATPIF1-202ENST00000465645 1855 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
TNRC18O15417 PTHLH-203ENST00000395872 1318 ntAPPRIS ALT1 TSL 5 BASIC19.38■□□□□ 0.69
TNRC18O15417 SRSF2-202ENST00000359995 1927 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
TNRC18O15417 SHOX-204ENST00000554971 1902 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
TNRC18O15417 LPCAT4-201ENST00000314891 2262 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
TNRC18O15417 IMPDH1-214ENST00000496200 2283 ntTSL 2 BASIC19.38■□□□□ 0.69
TNRC18O15417 FBXL16-203ENST00000562563 2257 ntTSL 2 BASIC19.38■□□□□ 0.69
TNRC18O15417 TRMT112-201ENST00000308774 561 ntAPPRIS ALT1 TSL 2 BASIC19.38■□□□□ 0.69
TNRC18O15417 C2orf76-202ENST00000409466 1150 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
TNRC18O15417 ZNF815P-202ENST00000422825 805 ntTSL 5 BASIC19.38■□□□□ 0.69
TNRC18O15417 CC2D2B-203ENST00000423344 1241 ntTSL 2 BASIC19.38■□□□□ 0.69
TNRC18O15417 SHBG-204ENST00000441599 973 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
TNRC18O15417 KRT18P41-201ENST00000518924 1277 ntBASIC19.38■□□□□ 0.69
TNRC18O15417 GALNT9-208ENST00000541995 1001 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
TNRC18O15417 AC007064.4-201ENST00000637740 555 ntBASIC19.38■□□□□ 0.69
TNRC18O15417 AC118344.1-201ENST00000378432 1462 ntTSL 2 BASIC19.38■□□□□ 0.69
TNRC18O15417 BCS1L-212ENST00000439945 1483 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
TNRC18O15417 TMEM109-202ENST00000536171 1959 ntAPPRIS P1 TSL 2 BASIC19.38■□□□□ 0.69
TNRC18O15417 HDAC11-202ENST00000402259 1000 ntTSL 3 BASIC19.38■□□□□ 0.69
TNRC18O15417 INE1-201ENST00000456273 945 ntBASIC19.38■□□□□ 0.69
TNRC18O15417 AL391335.1-201ENST00000504583 535 ntTSL 4 BASIC19.38■□□□□ 0.69
TNRC18O15417 IFITM2-204ENST00000533141 588 ntAPPRIS ALT2 TSL 4 BASIC19.38■□□□□ 0.69
TNRC18O15417 AC120498.3-201ENST00000568884 542 ntTSL 4 BASIC19.38■□□□□ 0.69
TNRC18O15417 APOC4-201ENST00000591600 348 ntTSL 3 BASIC19.38■□□□□ 0.69
TNRC18O15417 FOLR3-204ENST00000611028 820 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
TNRC18O15417 SYNE2-228ENST00000639659 1290 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
TNRC18O15417 ZBTB46-202ENST00000302995 2335 ntAPPRIS P1 TSL 2 BASIC19.38■□□□□ 0.69
TNRC18O15417 LIMS2-207ENST00000409808 2315 ntAPPRIS ALT1 TSL 5 BASIC19.38■□□□□ 0.69
TNRC18O15417 ULK3-217ENST00000568667 1470 ntTSL 5 BASIC19.38■□□□□ 0.69
TNRC18O15417 CA11-201ENST00000084798 1844 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
TNRC18O15417 ANKRD20A5P-207ENST00000581935 2089 ntTSL 2 BASIC19.37■□□□□ 0.69
TNRC18O15417 PML-205ENST00000395132 1738 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
TNRC18O15417 SKOR2-203ENST00000620245 3048 ntAPPRIS ALT2 TSL 5 BASIC19.37■□□□□ 0.69
TNRC18O15417 ILDR2-206ENST00000528703 2446 ntAPPRIS ALT2 TSL 5 BASIC19.37■□□□□ 0.69
TNRC18O15417 SDHB-201ENST00000375499 1153 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
TNRC18O15417 IGHV3-23-201ENST00000390609 432 ntAPPRIS P1 BASIC19.37■□□□□ 0.69
TNRC18O15417 AC007952.1-202ENST00000399083 1173 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
TNRC18O15417 TMEM14DP-201ENST00000422205 345 ntBASIC19.37■□□□□ 0.69
TNRC18O15417 GUSBP2-202ENST00000479900 1203 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
TNRC18O15417 AL139349.1-201ENST00000530479 577 ntTSL 4 BASIC19.37■□□□□ 0.69
TNRC18O15417 AC084125.2-203ENST00000532766 821 ntTSL 3 BASIC19.37■□□□□ 0.69
TNRC18O15417 MYMX-202ENST00000576476 682 ntAPPRIS P1 TSL 3 BASIC19.37■□□□□ 0.69
TNRC18O15417 AC106017.2-201ENST00000631194 1173 ntTSL 2 BASIC19.37■□□□□ 0.69
TNRC18O15417 TRMT44-205ENST00000513449 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
TNRC18O15417 ACTL6B-201ENST00000160382 1537 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
TNRC18O15417 LIMS2-202ENST00000355119 2045 ntAPPRIS ALT1 TSL 1 (best) BASIC19.37■□□□□ 0.69
TNRC18O15417 APBB3-204ENST00000358580 2020 ntTSL 5 BASIC19.37■□□□□ 0.69
TNRC18O15417 SELENOF-208ENST00000616787 1835 ntAPPRIS ALT1 TSL 5 BASIC19.37■□□□□ 0.69
TNRC18O15417 PFDN6-204ENST00000395131 884 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
TNRC18O15417 PSMA8-203ENST00000415576 1280 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
TNRC18O15417 C19orf24-202ENST00000469144 668 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
TNRC18O15417 DHRS4-205ENST00000558263 1089 ntTSL 5 BASIC19.37■□□□□ 0.69
TNRC18O15417 ATP6V0C-202ENST00000564973 1081 ntTSL 2 BASIC19.37■□□□□ 0.69
TNRC18O15417 AC026740.1-201ENST00000607068 791 ntBASIC19.37■□□□□ 0.69
TNRC18O15417 KHDRBS2-201ENST00000281156 2332 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
TNRC18O15417 NRL-206ENST00000561028 2103 ntAPPRIS P1 TSL 2 BASIC19.37■□□□□ 0.69
TNRC18O15417 RAB5C-201ENST00000346213 1671 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
TNRC18O15417 CYP27A1-201ENST00000258415 2286 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
TNRC18O15417 DET1-207ENST00000564406 2315 ntTSL 2 BASIC19.36■□□□□ 0.69
TNRC18O15417 AC007731.4-201ENST00000420225 652 ntTSL 2 BASIC19.36■□□□□ 0.69
TNRC18O15417 TOMM5-205ENST00000544379 635 ntTSL 2 BASIC19.36■□□□□ 0.69
TNRC18O15417 TMEM219-203ENST00000561899 1249 ntAPPRIS P1 TSL 2 BASIC19.36■□□□□ 0.69
TNRC18O15417 MAGIX-204ENST00000614074 778 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
TNRC18O15417 R3HDML-201ENST00000217043 1377 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
TNRC18O15417 FAM157B-201ENST00000446912 1795 ntTSL 2 BASIC19.36■□□□□ 0.69
TNRC18O15417 CLN3-206ENST00000360019 1840 ntTSL 2 BASIC19.36■□□□□ 0.69
TNRC18O15417 LY6K-201ENST00000292430 2671 ntAPPRIS P3 TSL 1 (best) BASIC19.36■□□□□ 0.69
TNRC18O15417 TNFRSF14-AS1-205ENST00000449660 1629 ntTSL 2 BASIC19.36■□□□□ 0.69
TNRC18O15417 RBPMS2P1-201ENST00000437762 623 ntBASIC19.36■□□□□ 0.69
TNRC18O15417 BEST4-201ENST00000372207 2047 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
TNRC18O15417 FAM187A-202ENST00000412523 1748 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
TNRC18O15417 AC020907.1-201ENST00000616460 1350 ntBASIC19.36■□□□□ 0.69
TNRC18O15417 NR2F1-205ENST00000615873 1427 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
TNRC18O15417 SLC3A2-202ENST00000377889 1993 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 38.2 ms