Protein–RNA interactions for Protein: O14617

AP3D1, AP-3 complex subunit delta-1, humanhuman

Predictions only

Length 1,153 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP3D1O14617 ZBTB44-201ENST00000357899 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
AP3D1O14617 CACNA1G-206ENST00000416767 4899 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
AP3D1O14617 CROCCP1-201ENST00000426910 5675 ntBASIC16.87■□□□□ 0.29
AP3D1O14617 FBXW9-203ENST00000587955 1437 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
AP3D1O14617 RAVER2-202ENST00000371072 4362 ntAPPRIS P2 TSL 1 (best) BASIC16.87■□□□□ 0.29
AP3D1O14617 SALL3-202ENST00000537592 6555 ntAPPRIS P1 TSL 5 BASIC16.86■□□□□ 0.29
AP3D1O14617 STRA6-209ENST00000563965 2565 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
AP3D1O14617 PDE4D-204ENST00000358923 2969 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
AP3D1O14617 CBFB-202ENST00000412916 2971 ntAPPRIS ALT1 TSL 1 (best) BASIC16.86■□□□□ 0.29
AP3D1O14617 PGRMC2-207ENST00000520121 3785 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
AP3D1O14617 SMARCA4-203ENST00000429416 5691 ntTSL 2 BASIC16.86■□□□□ 0.29
AP3D1O14617 LUC7L-221ENST00000629543 1520 ntTSL 5 BASIC16.86■□□□□ 0.29
AP3D1O14617 ZNF281-203ENST00000367353 3080 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
AP3D1O14617 SH2D2A-201ENST00000368198 1599 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
AP3D1O14617 NR2E1-202ENST00000368986 3212 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
AP3D1O14617 SATB1-201ENST00000338745 7810 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
AP3D1O14617 LAMC1-201ENST00000258341 7889 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
AP3D1O14617 FUOM-201ENST00000278025 709 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
AP3D1O14617 DHRS4L2-202ENST00000397071 1117 ntTSL 2 BASIC16.86■□□□□ 0.29
AP3D1O14617 HYAL3-203ENST00000415204 959 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
AP3D1O14617 LINC01063-201ENST00000441644 348 ntTSL 3 BASIC16.86■□□□□ 0.29
AP3D1O14617 HOXD8-203ENST00000450510 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
AP3D1O14617 DIO1-206ENST00000525202 558 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
AP3D1O14617 AC009065.1-201ENST00000564055 1225 ntBASIC16.86■□□□□ 0.29
AP3D1O14617 AC005606.2-201ENST00000564438 614 ntTSL 2 BASIC16.86■□□□□ 0.29
AP3D1O14617 YPEL3-207ENST00000566134 761 ntTSL 5 BASIC16.86■□□□□ 0.29
AP3D1O14617 CCDC28A-203ENST00000617445 1240 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
AP3D1O14617 AMIGO2-202ENST00000429635 3058 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
AP3D1O14617 WFDC1-203ENST00000568638 1319 ntAPPRIS P1 TSL 2 BASIC16.86■□□□□ 0.29
AP3D1O14617 HHATL-201ENST00000310417 1750 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
AP3D1O14617 AL512380.2-201ENST00000637901 1780 ntTSL 5 BASIC16.86■□□□□ 0.29
AP3D1O14617 MED9-201ENST00000268711 2228 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
AP3D1O14617 PRKCD-201ENST00000330452 2680 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
AP3D1O14617 FAM222A-201ENST00000358906 2731 ntAPPRIS P1 TSL 5 BASIC16.86■□□□□ 0.29
AP3D1O14617 CPT2-208ENST00000636891 2746 ntTSL 5 BASIC16.86■□□□□ 0.29
AP3D1O14617 CPT2-210ENST00000637252 2739 ntTSL 5 BASIC16.86■□□□□ 0.29
AP3D1O14617 LINC01568-207ENST00000641790 1380 ntBASIC16.86■□□□□ 0.29
AP3D1O14617 TRAM1-201ENST00000262213 2785 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
AP3D1O14617 TRMT6-201ENST00000203001 2327 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
AP3D1O14617 HOXB1-202ENST00000577092 1414 ntBASIC16.86■□□□□ 0.29
AP3D1O14617 MOAP1-201ENST00000298894 2441 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
AP3D1O14617 TBL3-205ENST00000568546 6803 ntAPPRIS P2 TSL 1 (best) BASIC16.86■□□□□ 0.29
AP3D1O14617 RASSF7-205ENST00000454668 1450 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
AP3D1O14617 PIEZO1-201ENST00000301015 8072 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
AP3D1O14617 RTCA-203ENST00000370128 2535 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
AP3D1O14617 AC140125.2-201ENST00000502515 1517 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
AP3D1O14617 USP18-201ENST00000215794 2129 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
AP3D1O14617 CCDC88C-203ENST00000389856 1641 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
AP3D1O14617 KIF13B-206ENST00000524189 8745 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
AP3D1O14617 EIF4G3-205ENST00000400422 5762 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
AP3D1O14617 RAI2-201ENST00000331511 2317 ntAPPRIS P1 TSL 2 BASIC16.85■□□□□ 0.29
AP3D1O14617 PHGDH-209ENST00000641074 1780 ntBASIC16.85■□□□□ 0.29
AP3D1O14617 SSC5D-202ENST00000587166 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
AP3D1O14617 SLX1B-SULT1A4-201ENST00000344620 2424 ntTSL 2 BASIC16.85■□□□□ 0.29
AP3D1O14617 MIPEP-201ENST00000382172 2400 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
AP3D1O14617 QRICH1-201ENST00000357496 3083 ntAPPRIS P1 TSL 2 BASIC16.85■□□□□ 0.29
AP3D1O14617 PDE2A-226ENST00000544570 3119 ntTSL 5 BASIC16.85■□□□□ 0.29
AP3D1O14617 TMEM160-201ENST00000253047 663 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
AP3D1O14617 SYCE1L-201ENST00000378644 858 ntAPPRIS P2 TSL 5 BASIC16.85■□□□□ 0.29
AP3D1O14617 KRTAP5-3-201ENST00000399685 899 ntAPPRIS P1 BASIC16.85■□□□□ 0.29
AP3D1O14617 AC087499.1-201ENST00000418141 1075 ntBASIC16.85■□□□□ 0.29
AP3D1O14617 CYB561D2-204ENST00000424512 1212 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
AP3D1O14617 AC013402.1-201ENST00000456999 561 ntTSL 4 BASIC16.85■□□□□ 0.29
AP3D1O14617 SMIM1-203ENST00000561886 491 ntTSL 2 BASIC16.85■□□□□ 0.29
AP3D1O14617 RNF165-206ENST00000590330 1049 ntTSL 2 BASIC16.85■□□□□ 0.29
AP3D1O14617 FP565260.3-205ENST00000620481 816 ntTSL 5 BASIC16.85■□□□□ 0.29
AP3D1O14617 TRAPPC6A-201ENST00000006275 805 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
AP3D1O14617 PTPRA-205ENST00000399903 3337 ntTSL 5 BASIC16.85■□□□□ 0.29
AP3D1O14617 FCGBP-203ENST00000620799 4926 ntTSL 5 BASIC16.85■□□□□ 0.29
AP3D1O14617 ERCC2-205ENST00000485403 1538 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
AP3D1O14617 NDFIP1-201ENST00000253814 3851 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
AP3D1O14617 UROS-202ENST00000368778 1556 ntTSL 2 BASIC16.85■□□□□ 0.29
AP3D1O14617 EDNRA-206ENST00000511804 1569 ntTSL 2 BASIC16.85■□□□□ 0.29
AP3D1O14617 NOX4-201ENST00000263317 2388 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
AP3D1O14617 CBSL-202ENST00000617706 2563 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
AP3D1O14617 NIFK-201ENST00000285814 1734 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
AP3D1O14617 SYT17-207ENST00000568115 1721 ntTSL 5 BASIC16.84■□□□□ 0.29
AP3D1O14617 AC084018.2-201ENST00000613093 2607 ntBASIC16.84■□□□□ 0.29
AP3D1O14617 DTX2-201ENST00000324432 2769 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
AP3D1O14617 TPRA1-204ENST00000450633 1865 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
AP3D1O14617 NFATC2-206ENST00000609943 5690 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
AP3D1O14617 MAGI1-213ENST00000483466 4791 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
AP3D1O14617 RGN-204ENST00000457380 2041 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
AP3D1O14617 MAP3K6-201ENST00000357582 4136 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
AP3D1O14617 BFSP1-205ENST00000536626 2075 ntTSL 2 BASIC16.84■□□□□ 0.29
AP3D1O14617 CHTOP-203ENST00000368690 2165 ntAPPRIS ALT1 TSL 1 (best) BASIC16.84■□□□□ 0.29
AP3D1O14617 AC134043.2-201ENST00000624206 2238 ntBASIC16.84■□□□□ 0.29
AP3D1O14617 STIM2-212ENST00000639640 2241 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
AP3D1O14617 DAPK1-202ENST00000408954 5892 ntAPPRIS P1 TSL 2 BASIC16.84■□□□□ 0.29
AP3D1O14617 ANK1-206ENST00000348036 622 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
AP3D1O14617 S100A16-203ENST00000368705 956 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
AP3D1O14617 FAHD2CP-202ENST00000443258 893 ntTSL 3 BASIC16.84■□□□□ 0.29
AP3D1O14617 AC009947.2-201ENST00000444014 672 ntBASIC16.84■□□□□ 0.29
AP3D1O14617 UNC5B-AS1-201ENST00000447119 647 ntTSL 2 BASIC16.84■□□□□ 0.29
AP3D1O14617 AC002467.1-201ENST00000457510 657 ntTSL 3 BASIC16.84■□□□□ 0.29
AP3D1O14617 CCNJL-205ENST00000519673 940 ntTSL 2 BASIC16.84■□□□□ 0.29
AP3D1O14617 AC079385.1-202ENST00000549203 569 ntTSL 4 BASIC16.84■□□□□ 0.29
AP3D1O14617 AC015712.4-203ENST00000559673 630 ntTSL 3 BASIC16.84■□□□□ 0.29
AP3D1O14617 NUBP2-206ENST00000565134 815 ntTSL 5 BASIC16.84■□□□□ 0.29
AP3D1O14617 TMEM249-203ENST00000565365 975 ntAPPRIS P2 TSL 3 BASIC16.84■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 36.4 ms