Protein–RNA interactions for Protein: O00151

PDLIM1, PDZ and LIM domain protein 1, humanhuman

Predictions only

Length 329 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1O00151 MARVELD3-202ENST00000299952 2214 ntAPPRIS ALT2 TSL 2 BASIC17.19■□□□□ 0.34
PDLIM1O00151 EDA-203ENST00000374552 5278 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
PDLIM1O00151 CTAG2-201ENST00000247306 993 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
PDLIM1O00151 METTL27-201ENST00000297873 941 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
PDLIM1O00151 TCEAL6-202ENST00000372774 1106 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
PDLIM1O00151 MDFI-202ENST00000373050 809 ntTSL 2 BASIC17.19■□□□□ 0.34
PDLIM1O00151 CALML5-201ENST00000380332 859 ntAPPRIS P1 BASIC17.19■□□□□ 0.34
PDLIM1O00151 RALGPS1-206ENST00000394011 819 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
PDLIM1O00151 AL590666.2-201ENST00000448869 758 ntTSL 2 BASIC17.19■□□□□ 0.34
PDLIM1O00151 FAM13C-204ENST00000468840 2110 ntAPPRIS ALT2 TSL 2 BASIC17.19■□□□□ 0.34
PDLIM1O00151 AC108693.2-201ENST00000492981 303 ntTSL 3 BASIC17.19■□□□□ 0.34
PDLIM1O00151 FDX2-207ENST00000494368 584 ntTSL 4 BASIC17.19■□□□□ 0.34
PDLIM1O00151 CAVIN3-203ENST00000530979 957 ntTSL 2 BASIC17.19■□□□□ 0.34
PDLIM1O00151 REXO2-216ENST00000544196 452 ntTSL 3 BASIC17.19■□□□□ 0.34
PDLIM1O00151 ISG20-210ENST00000560741 800 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
PDLIM1O00151 SLC52A1-201ENST00000254853 2377 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
PDLIM1O00151 SARDH-205ENST00000422262 2367 ntTSL 5 BASIC17.19■□□□□ 0.34
PDLIM1O00151 MRPS2-201ENST00000241600 1510 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
PDLIM1O00151 HARS-201ENST00000307633 1780 ntTSL 2 BASIC17.19■□□□□ 0.34
PDLIM1O00151 GINM1-201ENST00000367419 2024 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
PDLIM1O00151 ASB6-203ENST00000450050 4535 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
PDLIM1O00151 GALNT9-201ENST00000328957 2410 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
PDLIM1O00151 KIAA0895-208ENST00000440378 2441 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
PDLIM1O00151 C1R-202ENST00000536053 2347 ntTSL 2 BASIC17.19■□□□□ 0.34
PDLIM1O00151 P2RX3-204ENST00000616487 1346 ntTSL 5 BASIC17.19■□□□□ 0.34
PDLIM1O00151 AC027796.3-201ENST00000572919 4753 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
PDLIM1O00151 CD34-202ENST00000356522 2874 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
PDLIM1O00151 ALOX12-201ENST00000251535 2358 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
PDLIM1O00151 ZIC1-201ENST00000282928 5241 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
PDLIM1O00151 ABCC3-202ENST00000427699 1881 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
PDLIM1O00151 BEGAIN-201ENST00000355173 2674 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
PDLIM1O00151 TTYH2-206ENST00000529107 2015 ntTSL 2 BASIC17.18■□□□□ 0.34
PDLIM1O00151 DPP9-AS1-201ENST00000381796 3071 ntTSL 2 BASIC17.18■□□□□ 0.34
PDLIM1O00151 NARF-204ENST00000390006 1766 ntTSL 2 BASIC17.18■□□□□ 0.34
PDLIM1O00151 AP001094.4-201ENST00000579008 2176 ntBASIC17.18■□□□□ 0.34
PDLIM1O00151 C6orf106-202ENST00000374023 4418 ntAPPRIS P4 TSL 1 (best) BASIC17.18■□□□□ 0.34
PDLIM1O00151 ZNF764-201ENST00000252797 2738 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
PDLIM1O00151 RUNX1-203ENST00000358356 2720 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
PDLIM1O00151 IL12RB2-202ENST00000371000 2454 ntTSL 2 BASIC17.18■□□□□ 0.34
PDLIM1O00151 AC005052.1-201ENST00000625181 2492 ntBASIC17.18■□□□□ 0.34
PDLIM1O00151 THAP3-203ENST00000377627 2053 ntAPPRIS P3 TSL 2 BASIC17.18■□□□□ 0.34
PDLIM1O00151 ANKRD29-201ENST00000322980 1658 ntTSL 2 BASIC17.18■□□□□ 0.34
PDLIM1O00151 TMEM230-206ENST00000379283 1660 ntAPPRIS P1 TSL 3 BASIC17.18■□□□□ 0.34
PDLIM1O00151 STK25-201ENST00000316586 4619 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
PDLIM1O00151 ANKRD10-202ENST00000310847 1193 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
PDLIM1O00151 COQ10B-203ENST00000409398 879 ntTSL 3 BASIC17.18■□□□□ 0.34
PDLIM1O00151 DYNLT3-203ENST00000432389 719 ntTSL 5 BASIC17.18■□□□□ 0.34
PDLIM1O00151 ABCC5-211ENST00000446941 883 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
PDLIM1O00151 CXCL2-202ENST00000508487 1218 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
PDLIM1O00151 TGIF1-219ENST00000551541 990 ntTSL 2 BASIC17.18■□□□□ 0.34
PDLIM1O00151 AC097641.1-201ENST00000580671 588 ntTSL 4 BASIC17.18■□□□□ 0.34
PDLIM1O00151 AC004706.3-201ENST00000634558 1009 ntTSL 5 BASIC17.18■□□□□ 0.34
PDLIM1O00151 HLA-A-209ENST00000638375 975 ntBASIC17.18■□□□□ 0.34
PDLIM1O00151 AL049637.2-201ENST00000641778 930 ntBASIC17.18■□□□□ 0.34
PDLIM1O00151 BID-213ENST00000615414 2236 ntTSL 5 BASIC17.18■□□□□ 0.34
PDLIM1O00151 UBE3A-201ENST00000232165 5051 ntAPPRIS P3 TSL 5 BASIC17.18■□□□□ 0.34
PDLIM1O00151 AC068418.2-201ENST00000577309 3703 ntBASIC17.18■□□□□ 0.34
PDLIM1O00151 RASIP1-201ENST00000222145 3308 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
PDLIM1O00151 PCDHB19P-201ENST00000570871 2371 ntBASIC17.18■□□□□ 0.34
PDLIM1O00151 EIF3L-202ENST00000406934 2282 ntTSL 2 BASIC17.18■□□□□ 0.34
PDLIM1O00151 TLE2-204ENST00000455444 2253 ntTSL 5 BASIC17.18■□□□□ 0.34
PDLIM1O00151 JAG1-201ENST00000254958 6048 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
PDLIM1O00151 ERLEC1-201ENST00000185150 2433 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
PDLIM1O00151 NPAS1-201ENST00000439365 1341 ntTSL 2 BASIC17.18■□□□□ 0.34
PDLIM1O00151 AL121758.1-201ENST00000488788 2714 ntAPPRIS P1 TSL 2 BASIC17.18■□□□□ 0.34
PDLIM1O00151 PUS1-208ENST00000542167 2151 ntTSL 5 BASIC17.18■□□□□ 0.34
PDLIM1O00151 RFC2-213ENST00000621097 1635 ntTSL 5 BASIC17.18■□□□□ 0.34
PDLIM1O00151 STRN4-204ENST00000539396 2608 ntTSL 2 BASIC17.17■□□□□ 0.34
PDLIM1O00151 AL136379.1-201ENST00000623471 2642 ntBASIC17.17■□□□□ 0.34
PDLIM1O00151 GSDMD-201ENST00000262580 1762 ntAPPRIS P2 TSL 1 (best) BASIC17.17■□□□□ 0.34
PDLIM1O00151 GAL3ST1-201ENST00000338911 1782 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
PDLIM1O00151 JPH2-201ENST00000342272 1923 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
PDLIM1O00151 SLC27A6-201ENST00000262462 3219 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
PDLIM1O00151 PCGF6-202ENST00000369847 2230 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
PDLIM1O00151 LETM2-205ENST00000519476 2240 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
PDLIM1O00151 SLC29A2-206ENST00000546034 2509 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
PDLIM1O00151 KRT8P41-201ENST00000533985 1514 ntBASIC17.17■□□□□ 0.34
PDLIM1O00151 LYPD3-201ENST00000244333 1694 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
PDLIM1O00151 TTC8-202ENST00000345383 2329 ntTSL 5 BASIC17.17■□□□□ 0.34
PDLIM1O00151 NFS1-202ENST00000374085 2645 ntTSL 2 BASIC17.17■□□□□ 0.34
PDLIM1O00151 NIFKP9-201ENST00000419265 221 ntBASIC17.17■□□□□ 0.34
PDLIM1O00151 AC005056.1-201ENST00000435932 532 ntTSL 4 BASIC17.17■□□□□ 0.34
PDLIM1O00151 BABAM1-202ENST00000447614 930 ntAPPRIS ALT2 TSL 5 BASIC17.17■□□□□ 0.34
PDLIM1O00151 WDR86-AS1-203ENST00000480632 704 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
PDLIM1O00151 AC092718.1-201ENST00000501068 1088 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
PDLIM1O00151 PAIP2-208ENST00000511706 468 ntTSL 5 BASIC17.17■□□□□ 0.34
PDLIM1O00151 HLX-AS1-201ENST00000552026 563 ntTSL 4 BASIC17.17■□□□□ 0.34
PDLIM1O00151 AC006116.8-202ENST00000587620 1550 ntBASIC17.17■□□□□ 0.34
PDLIM1O00151 TPGS2-219ENST00000593035 1727 ntAPPRIS ALT2 TSL 2 BASIC17.17■□□□□ 0.34
PDLIM1O00151 AP001412.1-201ENST00000608405 714 ntBASIC17.17■□□□□ 0.34
PDLIM1O00151 TBC1D3I-202ENST00000618620 1900 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
PDLIM1O00151 GGA1-203ENST00000343632 3159 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
PDLIM1O00151 VKORC1L1-201ENST00000360768 5899 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
PDLIM1O00151 KRT81-202ENST00000615839 1505 ntAPPRIS ALT2 TSL 5 BASIC17.16■□□□□ 0.34
PDLIM1O00151 FBXO7-201ENST00000266087 2195 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
PDLIM1O00151 PHF20L1-209ENST00000395386 6237 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
PDLIM1O00151 TBKBP1-204ENST00000622396 2010 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
PDLIM1O00151 RHBDL1-201ENST00000219551 1560 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
PDLIM1O00151 ACAA1-209ENST00000450296 1570 ntTSL 5 BASIC17.16■□□□□ 0.34
PDLIM1O00151 TCAF2P1-201ENST00000291129 2421 ntBASIC17.16■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 37.8 ms