Protein–RNA interactions for Protein: E9PAV3

NACA, Nascent polypeptide-associated complex subunit alpha, muscle-specific form, humanhuman

Predictions only

Length 2,078 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NACAE9PAV3 UBE2Q2-201ENST00000267938 3130 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
NACAE9PAV3 RNF170-205ENST00000526349 1338 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
NACAE9PAV3 ANXA3-201ENST00000264908 1657 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
NACAE9PAV3 LYNX1-206ENST00000621401 4537 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
NACAE9PAV3 RGN-204ENST00000457380 2041 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
NACAE9PAV3 QPRT-202ENST00000395384 2343 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
NACAE9PAV3 AC005865.2-201ENST00000505276 2303 ntTSL 2 BASIC13.19□□□□□ -0.3
NACAE9PAV3 SSUH2-202ENST00000341795 1799 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
NACAE9PAV3 CSAD-209ENST00000453446 1774 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
NACAE9PAV3 AC127496.1-202ENST00000573602 2091 ntTSL 2 BASIC13.19□□□□□ -0.3
NACAE9PAV3 SLC27A1-201ENST00000252595 3594 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
NACAE9PAV3 CACNA1I-202ENST00000402142 10004 ntAPPRIS P4 TSL 1 (best) BASIC13.19□□□□□ -0.3
NACAE9PAV3 NRBP1-204ENST00000379863 2174 ntTSL 5 BASIC13.19□□□□□ -0.3
NACAE9PAV3 CALHM2-201ENST00000260743 1859 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
NACAE9PAV3 TTLL8-201ENST00000266182 2505 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
NACAE9PAV3 SCGB3A1-201ENST00000292641 521 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
NACAE9PAV3 POLR2D-202ENST00000409698 806 ntTSL 2 BASIC13.19□□□□□ -0.3
NACAE9PAV3 AL445685.1-201ENST00000425802 762 ntTSL 3 BASIC13.19□□□□□ -0.3
NACAE9PAV3 AC117947.1-201ENST00000427448 529 ntBASIC13.19□□□□□ -0.3
NACAE9PAV3 NT5C2-211ENST00000470299 249 ntTSL 5 BASIC13.19□□□□□ -0.3
NACAE9PAV3 AC091153.3-201ENST00000497885 472 ntTSL 2 BASIC13.19□□□□□ -0.3
NACAE9PAV3 PTP4A3-206ENST00000524028 963 ntTSL 5 BASIC13.19□□□□□ -0.3
NACAE9PAV3 AC010203.1-204ENST00000548782 407 ntBASIC13.19□□□□□ -0.3
NACAE9PAV3 MYC-208ENST00000641036 567 ntBASIC13.19□□□□□ -0.3
NACAE9PAV3 CDS1-201ENST00000295887 4461 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
NACAE9PAV3 CKMT1A-202ENST00000413453 1911 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
NACAE9PAV3 GPR83-202ENST00000539203 1909 ntTSL 5 BASIC13.19□□□□□ -0.3
NACAE9PAV3 RAB4B-EGLN2-201ENST00000594136 2554 ntAPPRIS P1 TSL 2 BASIC13.19□□□□□ -0.3
NACAE9PAV3 MINOS1-NBL1-204ENST00000602662 1623 ntAPPRIS P1 TSL 2 BASIC13.19□□□□□ -0.3
NACAE9PAV3 TJP2-202ENST00000377245 4611 ntAPPRIS P4 TSL 1 (best) BASIC13.19□□□□□ -0.3
NACAE9PAV3 MAP3K9-201ENST00000381250 4025 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
NACAE9PAV3 SCAP-201ENST00000265565 4394 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
NACAE9PAV3 LRRC43-201ENST00000339777 2028 ntAPPRIS P2 TSL 5 BASIC13.18□□□□□ -0.3
NACAE9PAV3 SMPD3-211ENST00000568373 2073 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
NACAE9PAV3 DCLK1-203ENST00000379892 2101 ntTSL 5 BASIC13.18□□□□□ -0.3
NACAE9PAV3 C3orf58-201ENST00000315691 4346 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
NACAE9PAV3 MIB2-219ENST00000505820 3305 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
NACAE9PAV3 NR4A1-203ENST00000394824 2639 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
NACAE9PAV3 MYH14-202ENST00000376970 6787 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
NACAE9PAV3 AGER-205ENST00000375069 1538 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
NACAE9PAV3 CYP51A1P1-201ENST00000492267 1507 ntBASIC13.18□□□□□ -0.3
NACAE9PAV3 SNHG10-201ENST00000500370 1531 ntTSL 2 BASIC13.18□□□□□ -0.3
NACAE9PAV3 NPBWR1-201ENST00000331251 2687 ntAPPRIS P1 BASIC13.18□□□□□ -0.3
NACAE9PAV3 TUBA3C-201ENST00000400113 1551 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
NACAE9PAV3 TSPAN17-201ENST00000298564 2810 ntTSL 2 BASIC13.18□□□□□ -0.3
NACAE9PAV3 EPS8-201ENST00000281172 4061 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
NACAE9PAV3 NR2C2-206ENST00000425241 2494 ntAPPRIS P1 TSL 2 BASIC13.18□□□□□ -0.3
NACAE9PAV3 FAM212A-201ENST00000333323 1040 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
NACAE9PAV3 GLRX2-201ENST00000367439 701 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
NACAE9PAV3 AC104076.2-201ENST00000448912 469 ntBASIC13.18□□□□□ -0.3
NACAE9PAV3 TSPY17P-201ENST00000450329 467 ntBASIC13.18□□□□□ -0.3
NACAE9PAV3 SNCB-205ENST00000510387 730 ntAPPRIS P1 TSL 2 BASIC13.18□□□□□ -0.3
NACAE9PAV3 LY6E-211ENST00000521699 1256 ntAPPRIS P2 TSL 5 BASIC13.18□□□□□ -0.3
NACAE9PAV3 RAB2A-211ENST00000531289 1058 ntTSL 2 BASIC13.18□□□□□ -0.3
NACAE9PAV3 ULK4P3-205ENST00000568486 1158 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
NACAE9PAV3 AC215522.2-202ENST00000633163 1143 ntTSL 5 BASIC13.18□□□□□ -0.3
NACAE9PAV3 NAA35-201ENST00000361671 2649 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
NACAE9PAV3 AL512380.2-201ENST00000637901 1780 ntTSL 5 BASIC13.18□□□□□ -0.3
NACAE9PAV3 ZNF133-212ENST00000622607 2660 ntAPPRIS ALT2 TSL 4 BASIC13.18□□□□□ -0.3
NACAE9PAV3 ADD1-201ENST00000264758 4045 ntAPPRIS P3 TSL 5 BASIC13.18□□□□□ -0.3
NACAE9PAV3 LRRC27-201ENST00000344079 1809 ntAPPRIS ALT2 TSL 2 BASIC13.18□□□□□ -0.3
NACAE9PAV3 SCAND1-203ENST00000615116 1371 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
NACAE9PAV3 DOC2B-203ENST00000613549 6048 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
NACAE9PAV3 PRKAR2B-201ENST00000265717 3745 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
NACAE9PAV3 KLF3-201ENST00000261438 5122 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
NACAE9PAV3 FBXO44-201ENST00000251546 1896 ntTSL 2 BASIC13.18□□□□□ -0.3
NACAE9PAV3 PPAN-P2RY11-201ENST00000393796 2385 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
NACAE9PAV3 DDX31-201ENST00000310532 2408 ntTSL 2 BASIC13.18□□□□□ -0.3
NACAE9PAV3 MRPL3-202ENST00000425847 1457 ntTSL 2 BASIC13.18□□□□□ -0.3
NACAE9PAV3 LENG8-202ENST00000376514 5146 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
NACAE9PAV3 OLFM1-201ENST00000252854 2591 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
NACAE9PAV3 SIPA1-201ENST00000394224 3628 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
NACAE9PAV3 ACSL6-205ENST00000379246 2622 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
NACAE9PAV3 STYXL1-208ENST00000451157 1570 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
NACAE9PAV3 MYLKP1-201ENST00000509077 1580 ntBASIC13.18□□□□□ -0.3
NACAE9PAV3 PEPD-203ENST00000436370 1638 ntTSL 2 BASIC13.18□□□□□ -0.3
NACAE9PAV3 SLC30A5-202ENST00000396591 4360 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
NACAE9PAV3 SLC22A4-201ENST00000200652 2201 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
NACAE9PAV3 AL590648.2-201ENST00000427949 2225 ntTSL 2 BASIC13.18□□□□□ -0.3
NACAE9PAV3 MROH1-202ENST00000423230 1712 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
NACAE9PAV3 SNX9-201ENST00000392185 4198 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
NACAE9PAV3 ARID1A-205ENST00000457599 6268 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
NACAE9PAV3 TMEM160-201ENST00000253047 663 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
NACAE9PAV3 BAD-201ENST00000309032 929 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
NACAE9PAV3 LCE3C-201ENST00000333881 425 ntAPPRIS P1 BASIC13.17□□□□□ -0.3
NACAE9PAV3 NDUFA1-201ENST00000371437 766 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
NACAE9PAV3 PRKCB-209ENST00000498058 480 ntTSL 3 BASIC13.17□□□□□ -0.3
NACAE9PAV3 ELF3-201ENST00000359651 4994 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
NACAE9PAV3 ASCL5-202ENST00000458416 1420 ntAPPRIS P1 BASIC13.17□□□□□ -0.3
NACAE9PAV3 TMEM110-MUSTN1-202ENST00000504329 1405 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
NACAE9PAV3 HOXB1-202ENST00000577092 1414 ntBASIC13.17□□□□□ -0.3
NACAE9PAV3 CD164L2-202ENST00000374027 1457 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
NACAE9PAV3 UROS-202ENST00000368778 1556 ntTSL 2 BASIC13.17□□□□□ -0.3
NACAE9PAV3 SLC30A4-201ENST00000261867 7157 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
NACAE9PAV3 POMT1-208ENST00000423007 3320 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
NACAE9PAV3 KMT2E-207ENST00000476671 2523 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
NACAE9PAV3 AC138028.4-201ENST00000564984 1845 ntBASIC13.17□□□□□ -0.3
NACAE9PAV3 AP005717.1-201ENST00000500705 1899 ntTSL 5 BASIC13.17□□□□□ -0.3
NACAE9PAV3 TEFM-205ENST00000581216 1891 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
NACAE9PAV3 THUMPD2-204ENST00000505747 1970 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Retrieved 100 of 98,524 protein–RNA pairs in 31.6 ms