Protein–RNA interactions for Protein: A6NKG5

RTL1, Retrotransposon-like protein 1, humanhuman

Predictions only

Length 1,358 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTL1A6NKG5 CHAC1-202ENST00000446533 1849 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
RTL1A6NKG5 MIF4GD-204ENST00000577542 1531 ntTSL 3 BASIC23.76■■□□□ 1.39
RTL1A6NKG5 CXXC5-201ENST00000302517 2658 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
RTL1A6NKG5 LTBP3-201ENST00000301873 4443 ntAPPRIS ALT2 TSL 2 BASIC23.76■■□□□ 1.39
RTL1A6NKG5 KRT9-201ENST00000246662 2290 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
RTL1A6NKG5 HOXA9-201ENST00000343483 2060 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
RTL1A6NKG5 FCER2-202ENST00000360067 1482 ntAPPRIS ALT2 TSL 5 BASIC23.76■■□□□ 1.39
RTL1A6NKG5 PF4-201ENST00000296029 604 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
RTL1A6NKG5 GUCA2A-201ENST00000357001 569 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
RTL1A6NKG5 AL355310.2-201ENST00000369843 688 ntTSL 3 BASIC23.76■■□□□ 1.39
RTL1A6NKG5 PDHA1-203ENST00000379805 734 ntTSL 2 BASIC23.76■■□□□ 1.39
RTL1A6NKG5 CRCP-205ENST00000431089 942 ntTSL 2 BASIC23.76■■□□□ 1.39
RTL1A6NKG5 FLJ20021-201ENST00000527564 790 ntTSL 2 BASIC23.76■■□□□ 1.39
RTL1A6NKG5 AC004801.5-202ENST00000546804 530 ntTSL 4 BASIC23.76■■□□□ 1.39
RTL1A6NKG5 AP005233.2-201ENST00000561588 372 ntTSL 3 BASIC23.76■■□□□ 1.39
RTL1A6NKG5 SMIM22-210ENST00000615471 928 ntAPPRIS ALT2 TSL 3 BASIC23.76■■□□□ 1.39
RTL1A6NKG5 SP100-208ENST00000427101 1922 ntTSL 2 BASIC23.76■■□□□ 1.39
RTL1A6NKG5 AC109460.3-201ENST00000569969 5296 ntTSL 2 BASIC23.76■■□□□ 1.39
RTL1A6NKG5 TPGS2-219ENST00000593035 1727 ntAPPRIS ALT2 TSL 2 BASIC23.76■■□□□ 1.39
RTL1A6NKG5 PARP16-202ENST00000444347 2352 ntTSL 2 BASIC23.76■■□□□ 1.39
RTL1A6NKG5 IFRD2-204ENST00000436390 2275 ntAPPRIS P1 TSL 2 BASIC23.75■■□□□ 1.39
RTL1A6NKG5 LY6E-207ENST00000520466 1419 ntAPPRIS P2 TSL 2 BASIC23.75■■□□□ 1.39
RTL1A6NKG5 ARRDC2-201ENST00000222250 2503 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
RTL1A6NKG5 SMOC2-206ENST00000535039 1875 ntTSL 5 BASIC23.75■■□□□ 1.39
RTL1A6NKG5 CDHR5-201ENST00000349570 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC23.75■■□□□ 1.39
RTL1A6NKG5 GNG4-203ENST00000391854 5104 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
RTL1A6NKG5 VRK3-225ENST00000601912 1668 ntAPPRIS ALT2 TSL 5 BASIC23.75■■□□□ 1.39
RTL1A6NKG5 EGFL7-203ENST00000371699 2125 ntAPPRIS P1 TSL 2 BASIC23.75■■□□□ 1.39
RTL1A6NKG5 LINC00271-201ENST00000421378 1580 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
RTL1A6NKG5 BRSK2-201ENST00000308219 4089 ntAPPRIS P3 TSL 1 (best) BASIC23.75■■□□□ 1.39
RTL1A6NKG5 TBC1D3I-202ENST00000618620 1900 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
RTL1A6NKG5 PSMC3IP-204ENST00000587209 1381 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
RTL1A6NKG5 HDAC11-202ENST00000402259 1000 ntTSL 3 BASIC23.75■■□□□ 1.39
RTL1A6NKG5 IMP4-203ENST00000409935 958 ntTSL 5 BASIC23.75■■□□□ 1.39
RTL1A6NKG5 AL391650.1-205ENST00000433939 579 ntAPPRIS P1 TSL 3 BASIC23.75■■□□□ 1.39
RTL1A6NKG5 BPHL-208ENST00000434640 1186 ntTSL 5 BASIC23.75■■□□□ 1.39
RTL1A6NKG5 LMX1B-203ENST00000526117 1195 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
RTL1A6NKG5 EEF1D-238ENST00000531621 840 ntTSL 3 BASIC23.75■■□□□ 1.39
RTL1A6NKG5 AP000763.4-201ENST00000544674 752 ntTSL 5 BASIC23.75■■□□□ 1.39
RTL1A6NKG5 SNHG15-206ENST00000580528 1073 ntTSL 2 BASIC23.75■■□□□ 1.39
RTL1A6NKG5 MATN4-205ENST00000537548 1991 ntAPPRIS ALT2 TSL 5 BASIC23.75■■□□□ 1.39
RTL1A6NKG5 PARD3-214ENST00000545693 5962 ntAPPRIS ALT2 TSL 1 (best) BASIC23.75■■□□□ 1.39
RTL1A6NKG5 SEPT4-201ENST00000317256 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC23.75■■□□□ 1.39
RTL1A6NKG5 CEP55-201ENST00000371485 2638 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
RTL1A6NKG5 NSUN5-201ENST00000252594 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC23.74■■□□□ 1.39
RTL1A6NKG5 ZNF398-202ENST00000475153 2860 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
RTL1A6NKG5 LINC00894-202ENST00000425602 1597 ntTSL 2 BASIC23.74■■□□□ 1.39
RTL1A6NKG5 ADAP1-205ENST00000449296 2093 ntTSL 2 BASIC23.74■■□□□ 1.39
RTL1A6NKG5 SRPX-202ENST00000432886 1725 ntTSL 2 BASIC23.74■■□□□ 1.39
RTL1A6NKG5 KRT24-201ENST00000264651 1881 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
RTL1A6NKG5 ADM-208ENST00000534464 1640 ntTSL 2 BASIC23.74■■□□□ 1.39
RTL1A6NKG5 KCNC3-203ENST00000477616 3176 ntAPPRIS P2 TSL 1 (best) BASIC23.74■■□□□ 1.39
RTL1A6NKG5 ZMAT3-203ENST00000432729 2944 ntAPPRIS ALT1 TSL 2 BASIC23.74■■□□□ 1.39
RTL1A6NKG5 P2RY2-201ENST00000311131 2660 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
RTL1A6NKG5 BRCC3-202ENST00000340647 1101 ntAPPRIS P2 TSL 2 BASIC23.74■■□□□ 1.39
RTL1A6NKG5 PSMA7-201ENST00000370858 925 ntTSL 2 BASIC23.74■■□□□ 1.39
RTL1A6NKG5 GYG2P1-204ENST00000382966 639 ntTSL 3 BASIC23.74■■□□□ 1.39
RTL1A6NKG5 IGKV4-1-201ENST00000390243 538 ntAPPRIS P1 BASIC23.74■■□□□ 1.39
RTL1A6NKG5 CENPM-203ENST00000402338 1002 ntTSL 2 BASIC23.74■■□□□ 1.39
RTL1A6NKG5 MIR503HG-203ENST00000441492 649 ntTSL 1 (best) BASIC23.74■■□□□ 1.39
RTL1A6NKG5 CR559946.1-201ENST00000453835 531 ntTSL 4 BASIC23.74■■□□□ 1.39
RTL1A6NKG5 HOXB-AS4-202ENST00000480386 566 ntTSL 4 BASIC23.74■■□□□ 1.39
RTL1A6NKG5 PAX9-204ENST00000554201 1289 ntTSL 2 BASIC23.74■■□□□ 1.39
RTL1A6NKG5 AL121820.2-201ENST00000556301 279 ntTSL 2 BASIC23.74■■□□□ 1.39
RTL1A6NKG5 BORCS8-206ENST00000585679 801 ntTSL 3 BASIC23.74■■□□□ 1.39
RTL1A6NKG5 CAPN1-226ENST00000533820 3083 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
RTL1A6NKG5 E4F1-201ENST00000301727 2573 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
RTL1A6NKG5 NABP2-201ENST00000267023 1417 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
RTL1A6NKG5 LMCD1-204ENST00000426878 1431 ntTSL 2 BASIC23.74■■□□□ 1.39
RTL1A6NKG5 MARK2-208ENST00000508192 2924 ntAPPRIS P3 TSL 5 BASIC23.73■■□□□ 1.39
RTL1A6NKG5 RGS11-203ENST00000359740 1371 ntTSL 1 (best) BASIC23.73■■□□□ 1.39
RTL1A6NKG5 IQCJ-SCHIP1-207ENST00000638749 2633 ntAPPRIS P3 TSL 1 (best) BASIC23.73■■□□□ 1.39
RTL1A6NKG5 ACADVL-205ENST00000543245 2227 ntTSL 2 BASIC23.73■■□□□ 1.39
RTL1A6NKG5 ZCCHC17-205ENST00000615916 1652 ntTSL 1 (best) BASIC23.73■■□□□ 1.39
RTL1A6NKG5 ARHGEF7-202ENST00000317133 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC23.73■■□□□ 1.39
RTL1A6NKG5 PIGU-202ENST00000374820 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC23.73■■□□□ 1.39
RTL1A6NKG5 KRT18P3-201ENST00000451602 1288 ntBASIC23.73■■□□□ 1.39
RTL1A6NKG5 AC136632.2-201ENST00000512891 861 ntBASIC23.73■■□□□ 1.39
RTL1A6NKG5 NT5C3B-215ENST00000521789 993 ntTSL 3 BASIC23.73■■□□□ 1.39
RTL1A6NKG5 AC040169.1-201ENST00000565382 521 ntBASIC23.73■■□□□ 1.39
RTL1A6NKG5 C1QL3-202ENST00000619991 783 ntTSL 1 (best) BASIC23.73■■□□□ 1.39
RTL1A6NKG5 MIR1199-201ENST00000621445 119 ntBASIC23.73■■□□□ 1.39
RTL1A6NKG5 PGM5P2-202ENST00000637225 1043 ntBASIC23.73■■□□□ 1.39
RTL1A6NKG5 MARK2-202ENST00000361128 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC23.73■■□□□ 1.39
RTL1A6NKG5 CCDC27-201ENST00000294600 2176 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
RTL1A6NKG5 HSP90B1-210ENST00000614327 1338 ntTSL 1 (best) BASIC23.73■■□□□ 1.39
RTL1A6NKG5 ZNF517-202ENST00000525105 1383 ntTSL 1 (best) BASIC23.72■■□□□ 1.39
RTL1A6NKG5 ERMP1-202ENST00000339450 5376 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
RTL1A6NKG5 LIPG-203ENST00000577628 2323 ntTSL 2 BASIC23.72■■□□□ 1.39
RTL1A6NKG5 VIM-201ENST00000224237 1868 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
RTL1A6NKG5 NOTCH2NL-201ENST00000362074 1874 ntAPPRIS P2 TSL 1 (best) BASIC23.72■■□□□ 1.39
RTL1A6NKG5 KIF1BP-201ENST00000361983 2544 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
RTL1A6NKG5 VMO1-202ENST00000354194 651 ntTSL 1 (best) BASIC23.72■■□□□ 1.39
RTL1A6NKG5 ELK2BP-201ENST00000415014 1224 ntBASIC23.72■■□□□ 1.39
RTL1A6NKG5 SNHG11-204ENST00000420006 720 ntTSL 3 BASIC23.72■■□□□ 1.39
RTL1A6NKG5 SNHG11-206ENST00000432153 1181 ntTSL 3 BASIC23.72■■□□□ 1.39
RTL1A6NKG5 SPCS2-202ENST00000526361 772 ntTSL 2 BASIC23.72■■□□□ 1.39
RTL1A6NKG5 ABO-202ENST00000538324 1147 ntAPPRIS P5 TSL 5 BASIC23.72■■□□□ 1.39
RTL1A6NKG5 AC025259.3-201ENST00000564531 542 ntTSL 3 BASIC23.72■■□□□ 1.39
RTL1A6NKG5 HAGH-208ENST00000566709 1291 ntTSL 5 BASIC23.72■■□□□ 1.39
Retrieved 100 of 98,524 protein–RNA pairs in 59.6 ms