Protein–RNA interactions for Protein: A6NER0

TBC1D3F, TBC1 domain family member 3F, humanhuman

Predicted RBP Predictions only

Length 549 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TBC1D3FA6NER0 MYL6-203ENST00000536128 1221 ntTSL 2 BASIC17.9■□□□□ 0.46
TBC1D3FA6NER0 AC012615.3-201ENST00000592884 500 ntTSL 3 BASIC17.9■□□□□ 0.46
TBC1D3FA6NER0 PLPBP-201ENST00000328195 2558 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
TBC1D3FA6NER0 ASCC1-205ENST00000394919 2683 ntAPPRIS P1 TSL 2 BASIC17.9■□□□□ 0.46
TBC1D3FA6NER0 PITHD1-201ENST00000246151 1603 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
TBC1D3FA6NER0 HTD2-206ENST00000481972 1378 ntAPPRIS P1 TSL 2 BASIC17.9■□□□□ 0.46
TBC1D3FA6NER0 AC132938.6-201ENST00000623828 1655 ntBASIC17.9■□□□□ 0.46
TBC1D3FA6NER0 ZIC3-202ENST00000370606 1968 ntTSL 5 BASIC17.9■□□□□ 0.46
TBC1D3FA6NER0 MPP5-201ENST00000261681 5552 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
TBC1D3FA6NER0 TMPRSS12-201ENST00000398458 1450 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
TBC1D3FA6NER0 CCDC188-201ENST00000439765 1475 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.45
TBC1D3FA6NER0 TRMT2A-201ENST00000252136 2964 ntAPPRIS P3 TSL 1 (best) BASIC17.89■□□□□ 0.45
TBC1D3FA6NER0 AHCYL2-201ENST00000325006 5056 ntAPPRIS P3 TSL 1 (best) BASIC17.89■□□□□ 0.45
TBC1D3FA6NER0 AGAP4-201ENST00000311652 2715 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
TBC1D3FA6NER0 CDK17-203ENST00000543119 2442 ntTSL 2 BASIC17.89■□□□□ 0.45
TBC1D3FA6NER0 AC138028.1-201ENST00000333666 2137 ntTSL 2 BASIC17.89■□□□□ 0.45
TBC1D3FA6NER0 STARD3-201ENST00000336308 2132 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
TBC1D3FA6NER0 MBD1-208ENST00000398493 1845 ntTSL 5 BASIC17.89■□□□□ 0.45
TBC1D3FA6NER0 TRABD2A-202ENST00000409133 1554 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
TBC1D3FA6NER0 FGF8-203ENST00000346714 694 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
TBC1D3FA6NER0 AL031284.1-201ENST00000419297 478 ntBASIC17.89■□□□□ 0.45
TBC1D3FA6NER0 SCARNA2-201ENST00000458748 420 ntBASIC17.89■□□□□ 0.45
TBC1D3FA6NER0 MCCC2-205ENST00000509358 1214 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
TBC1D3FA6NER0 AC073648.2-201ENST00000510116 352 ntBASIC17.89■□□□□ 0.45
TBC1D3FA6NER0 C12orf76-202ENST00000546627 461 ntTSL 4 BASIC17.89■□□□□ 0.45
TBC1D3FA6NER0 DCTPP1-204ENST00000568434 853 ntTSL 2 BASIC17.89■□□□□ 0.45
TBC1D3FA6NER0 SHBG-211ENST00000574539 938 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
TBC1D3FA6NER0 RLN3-202ENST00000585987 541 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
TBC1D3FA6NER0 AP001269.4-201ENST00000609611 512 ntBASIC17.89■□□□□ 0.45
TBC1D3FA6NER0 BX640515.1-201ENST00000617215 977 ntBASIC17.89■□□□□ 0.45
TBC1D3FA6NER0 ANKMY2-206ENST00000628652 1270 ntTSL 5 BASIC17.89■□□□□ 0.45
TBC1D3FA6NER0 POLR2M-206ENST00000494490 1648 ntTSL 5 BASIC17.89■□□□□ 0.45
TBC1D3FA6NER0 CD19-202ENST00000538922 1957 ntAPPRIS ALT2 TSL 5 BASIC17.89■□□□□ 0.45
TBC1D3FA6NER0 TNXA-203ENST00000507684 2038 ntBASIC17.89■□□□□ 0.45
TBC1D3FA6NER0 AMZ2-203ENST00000392720 1378 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
TBC1D3FA6NER0 GULP1-206ENST00000409830 1376 ntAPPRIS P3 TSL 1 (best) BASIC17.89■□□□□ 0.45
TBC1D3FA6NER0 PAN3-AS1-201ENST00000563843 1351 ntBASIC17.89■□□□□ 0.45
TBC1D3FA6NER0 ITGBL1-202ENST00000376180 2494 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
TBC1D3FA6NER0 POLD3-203ENST00000527458 2122 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
TBC1D3FA6NER0 COA5-201ENST00000328709 1754 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
TBC1D3FA6NER0 AC063977.6-201ENST00000600074 1763 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
TBC1D3FA6NER0 FDXR-214ENST00000581530 1827 ntAPPRIS P3 TSL 1 (best) BASIC17.88■□□□□ 0.45
TBC1D3FA6NER0 TBC1D3P5-201ENST00000579401 1545 ntBASIC17.88■□□□□ 0.45
TBC1D3FA6NER0 SDCBP2-204ENST00000381812 1550 ntAPPRIS P1 TSL 5 BASIC17.88■□□□□ 0.45
TBC1D3FA6NER0 DAG1-222ENST00000545947 5829 ntAPPRIS P1 TSL 5 BASIC17.88■□□□□ 0.45
TBC1D3FA6NER0 AC069544.2-201ENST00000640019 2528 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
TBC1D3FA6NER0 TSPY2-201ENST00000320701 1161 ntAPPRIS P5 TSL 1 (best) BASIC17.88■□□□□ 0.45
TBC1D3FA6NER0 ZNF7-201ENST00000325217 592 ntTSL 4 BASIC17.88■□□□□ 0.45
TBC1D3FA6NER0 TSPY2-203ENST00000429039 779 ntAPPRIS ALT2 TSL 2 BASIC17.88■□□□□ 0.45
TBC1D3FA6NER0 FGFR3P6-201ENST00000457012 610 ntBASIC17.88■□□□□ 0.45
TBC1D3FA6NER0 CMPK1-205ENST00000471289 816 ntTSL 2 BASIC17.88■□□□□ 0.45
TBC1D3FA6NER0 AC093909.1-201ENST00000504731 1122 ntBASIC17.88■□□□□ 0.45
TBC1D3FA6NER0 RNPS1P1-201ENST00000507437 918 ntBASIC17.88■□□□□ 0.45
TBC1D3FA6NER0 CNOT8-225ENST00000524105 904 ntTSL 2 BASIC17.88■□□□□ 0.45
TBC1D3FA6NER0 ZBP1-208ENST00000541799 1041 ntAPPRIS ALT2 TSL 5 BASIC17.88■□□□□ 0.45
TBC1D3FA6NER0 RNPS1-222ENST00000567147 830 ntTSL 3 BASIC17.88■□□□□ 0.45
TBC1D3FA6NER0 AC008878.2-201ENST00000601870 942 ntAPPRIS P1 TSL 4 BASIC17.88■□□□□ 0.45
TBC1D3FA6NER0 AC148477.8-201ENST00000624298 468 ntBASIC17.88■□□□□ 0.45
TBC1D3FA6NER0 ABBA01031661.1-201ENST00000634362 1253 ntBASIC17.88■□□□□ 0.45
TBC1D3FA6NER0 PLCH2-203ENST00000378486 4837 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
TBC1D3FA6NER0 PLCH2-204ENST00000419816 4837 ntAPPRIS P1 TSL 5 BASIC17.88■□□□□ 0.45
TBC1D3FA6NER0 C6orf118-201ENST00000230301 1812 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
TBC1D3FA6NER0 GPANK1-204ENST00000375900 1814 ntAPPRIS P1 TSL 2 BASIC17.88■□□□□ 0.45
TBC1D3FA6NER0 ADGRA3-202ENST00000334304 4566 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
TBC1D3FA6NER0 PORCN-205ENST00000367574 1368 ntAPPRIS ALT1 TSL 1 (best) BASIC17.88■□□□□ 0.45
TBC1D3FA6NER0 AC011840.1-202ENST00000436477 1351 ntTSL 2 BASIC17.88■□□□□ 0.45
TBC1D3FA6NER0 PORCN-214ENST00000537758 1371 ntAPPRIS ALT1 TSL 1 (best) BASIC17.88■□□□□ 0.45
TBC1D3FA6NER0 MAGI3-201ENST00000307546 6430 ntTSL 5 BASIC17.88■□□□□ 0.45
TBC1D3FA6NER0 THOP1-205ENST00000586677 1872 ntTSL 2 BASIC17.88■□□□□ 0.45
TBC1D3FA6NER0 KIAA1522-202ENST00000373480 5294 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
TBC1D3FA6NER0 KIAA1522-203ENST00000373481 5293 ntAPPRIS ALT2 TSL 2 BASIC17.88■□□□□ 0.45
TBC1D3FA6NER0 PNCK-203ENST00000370145 1455 ntTSL 2 BASIC17.88■□□□□ 0.45
TBC1D3FA6NER0 PYCR2-208ENST00000612039 1549 ntTSL 3 BASIC17.88■□□□□ 0.45
TBC1D3FA6NER0 PYCR2-209ENST00000612651 1538 ntTSL 5 BASIC17.88■□□□□ 0.45
TBC1D3FA6NER0 XYLT2-203ENST00000507602 2107 ntTSL 2 BASIC17.87■□□□□ 0.45
TBC1D3FA6NER0 NOMO3-202ENST00000399336 4356 ntAPPRIS P2 TSL 1 (best) BASIC17.87■□□□□ 0.45
TBC1D3FA6NER0 DOC2B-203ENST00000613549 6048 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
TBC1D3FA6NER0 RHOT1-202ENST00000354266 2919 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
TBC1D3FA6NER0 NPEPL1-203ENST00000525817 1780 ntTSL 2 BASIC17.87■□□□□ 0.45
TBC1D3FA6NER0 SLC27A3-204ENST00000368661 2410 ntAPPRIS P2 TSL 1 (best) BASIC17.87■□□□□ 0.45
TBC1D3FA6NER0 PPP1R3F-202ENST00000376188 2443 ntTSL 2 BASIC17.87■□□□□ 0.45
TBC1D3FA6NER0 SEH1L-202ENST00000399892 1846 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
TBC1D3FA6NER0 TMEM235-202ENST00000421688 2490 ntAPPRIS P1 TSL 5 BASIC17.87■□□□□ 0.45
TBC1D3FA6NER0 HBA2-201ENST00000251595 605 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
TBC1D3FA6NER0 FCN3-201ENST00000270879 1030 ntAPPRIS P4 TSL 1 (best) BASIC17.87■□□□□ 0.45
TBC1D3FA6NER0 FCN3-202ENST00000354982 997 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
TBC1D3FA6NER0 ABCD1P5-201ENST00000445663 754 ntBASIC17.87■□□□□ 0.45
TBC1D3FA6NER0 MAP1LC3B-207ENST00000565788 625 ntTSL 2 BASIC17.87■□□□□ 0.45
TBC1D3FA6NER0 LINC01197-204ENST00000611265 956 ntTSL 5 BASIC17.87■□□□□ 0.45
TBC1D3FA6NER0 AC005632.4-201ENST00000613759 431 ntTSL 3 BASIC17.87■□□□□ 0.45
TBC1D3FA6NER0 METTL23-215ENST00000615984 1171 ntAPPRIS P1 TSL 2 BASIC17.87■□□□□ 0.45
TBC1D3FA6NER0 AL161669.4-201ENST00000634353 732 ntAPPRIS P1 TSL 2 BASIC17.87■□□□□ 0.45
TBC1D3FA6NER0 FAM50B-202ENST00000380274 1932 ntAPPRIS P1 BASIC17.87■□□□□ 0.45
TBC1D3FA6NER0 HSPB9-201ENST00000565659 1922 ntAPPRIS P1 BASIC17.87■□□□□ 0.45
TBC1D3FA6NER0 ANXA8-202ENST00000583448 1971 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
TBC1D3FA6NER0 FAM49B-214ENST00000519540 2021 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
TBC1D3FA6NER0 CCDC7-203ENST00000362006 2133 ntAPPRIS P2 TSL 1 (best) BASIC17.87■□□□□ 0.45
TBC1D3FA6NER0 KXD1-201ENST00000222307 1426 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
TBC1D3FA6NER0 KIF25-AS1-201ENST00000414364 1420 ntTSL 2 BASIC17.87■□□□□ 0.45
TBC1D3FA6NER0 AP005117.1-201ENST00000584346 1413 ntBASIC17.87■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 22.6 ms