Protein–RNA interactions for Protein: A2PYH4

HFM1, Probable ATP-dependent DNA helicase HFM1, humanhuman

Predictions only

Length 1,435 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HFM1A2PYH4 ATPAF2-213ENST00000585101 566 ntTSL 4 BASIC26.52■■□□□ 1.84
HFM1A2PYH4 AC132872.3-201ENST00000620937 629 ntTSL 5 BASIC26.52■■□□□ 1.84
HFM1A2PYH4 NDUFS7-210ENST00000539480 1743 ntTSL 2 BASIC26.52■■□□□ 1.84
HFM1A2PYH4 NOX4-201ENST00000263317 2388 ntAPPRIS P1 TSL 1 (best) BASIC26.52■■□□□ 1.84
HFM1A2PYH4 TMUB2-213ENST00000589856 1505 ntTSL 2 BASIC26.52■■□□□ 1.84
HFM1A2PYH4 RNF146-201ENST00000309649 2624 ntAPPRIS P3 TSL 4 BASIC26.52■■□□□ 1.84
HFM1A2PYH4 MFGE8-202ENST00000268151 1752 ntTSL 1 (best) BASIC26.52■■□□□ 1.84
HFM1A2PYH4 PMPCAP1-201ENST00000508114 1576 ntBASIC26.52■■□□□ 1.84
HFM1A2PYH4 HOTTIP-202ENST00000472494 2285 ntTSL 2 BASIC26.52■■□□□ 1.84
HFM1A2PYH4 PCCB-207ENST00000466072 1844 ntAPPRIS ALT2 TSL 3 BASIC26.52■■□□□ 1.84
HFM1A2PYH4 AMZ2-203ENST00000392720 1378 ntAPPRIS P1 TSL 1 (best) BASIC26.52■■□□□ 1.84
HFM1A2PYH4 LLGL2-203ENST00000392550 3509 ntAPPRIS P2 TSL 1 (best) BASIC26.51■■□□□ 1.84
HFM1A2PYH4 FAM206A-201ENST00000322940 2134 ntAPPRIS P1 TSL 1 (best) BASIC26.51■■□□□ 1.84
HFM1A2PYH4 FBXL15-201ENST00000224862 2362 ntAPPRIS P2 TSL 1 (best) BASIC26.51■■□□□ 1.84
HFM1A2PYH4 MAFF-206ENST00000538320 2458 ntAPPRIS P1 TSL 4 BASIC26.51■■□□□ 1.83
HFM1A2PYH4 GRK6-202ENST00000355958 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC26.51■■□□□ 1.83
HFM1A2PYH4 NSUN5P2-205ENST00000602348 1776 ntTSL 1 (best) BASIC26.51■■□□□ 1.83
HFM1A2PYH4 QRFP-201ENST00000343079 411 ntAPPRIS P1 BASIC26.51■■□□□ 1.83
HFM1A2PYH4 FUOM-202ENST00000368551 628 ntTSL 3 BASIC26.51■■□□□ 1.83
HFM1A2PYH4 B4GALT1-AS1-202ENST00000442432 843 ntTSL 2 BASIC26.51■■□□□ 1.83
HFM1A2PYH4 PON3-205ENST00000451904 1053 ntTSL 3 BASIC26.51■■□□□ 1.83
HFM1A2PYH4 AL137026.1-202ENST00000452578 1089 ntTSL 2 BASIC26.51■■□□□ 1.83
HFM1A2PYH4 AC097372.2-201ENST00000510996 732 ntTSL 3 BASIC26.51■■□□□ 1.83
HFM1A2PYH4 REXO2-206ENST00000539275 710 ntTSL 1 (best) BASIC26.51■■□□□ 1.83
HFM1A2PYH4 AC068594.1-202ENST00000581657 749 ntTSL 3 BASIC26.51■■□□□ 1.83
HFM1A2PYH4 AC008105.3-202ENST00000585471 1077 ntTSL 1 (best) BASIC26.51■■□□□ 1.83
HFM1A2PYH4 CALM3-211ENST00000598871 561 ntTSL 4 BASIC26.51■■□□□ 1.83
HFM1A2PYH4 IZUMO4-213ENST00000620263 947 ntTSL 3 BASIC26.51■■□□□ 1.83
HFM1A2PYH4 TMEM132A-202ENST00000453848 3346 ntAPPRIS ALT2 TSL 1 (best) BASIC26.51■■□□□ 1.83
HFM1A2PYH4 C11orf80-203ENST00000525449 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC26.51■■□□□ 1.83
HFM1A2PYH4 COLEC11-206ENST00000403096 1557 ntTSL 1 (best) BASIC26.51■■□□□ 1.83
HFM1A2PYH4 SDR39U1-206ENST00000553930 1325 ntTSL 5 BASIC26.51■■□□□ 1.83
HFM1A2PYH4 NPEPL1-204ENST00000525967 1917 ntTSL 1 (best) BASIC26.51■■□□□ 1.83
HFM1A2PYH4 LINC00683-201ENST00000578803 2221 ntTSL 2 BASIC26.51■■□□□ 1.83
HFM1A2PYH4 RNF2-201ENST00000367509 1677 ntTSL 2 BASIC26.51■■□□□ 1.83
HFM1A2PYH4 C19orf48-202ENST00000391812 1666 ntAPPRIS P1 TSL 2 BASIC26.51■■□□□ 1.83
HFM1A2PYH4 AC090206.1-201ENST00000615734 1678 ntTSL 5 BASIC26.51■■□□□ 1.83
HFM1A2PYH4 TCP11-201ENST00000244645 2018 ntAPPRIS P3 TSL 1 (best) BASIC26.51■■□□□ 1.83
HFM1A2PYH4 ZMAT3-203ENST00000432729 2944 ntAPPRIS ALT1 TSL 2 BASIC26.51■■□□□ 1.83
HFM1A2PYH4 PPT2-247ENST00000375143 1754 ntAPPRIS ALT2 TSL 5 BASIC26.5■■□□□ 1.83
HFM1A2PYH4 LRRC20-205ENST00000395010 2959 ntTSL 3 BASIC26.5■■□□□ 1.83
HFM1A2PYH4 ASB7-203ENST00000558747 2133 ntTSL 5 BASIC26.5■■□□□ 1.83
HFM1A2PYH4 MARK4-210ENST00000620044 2105 ntTSL 5 BASIC26.5■■□□□ 1.83
HFM1A2PYH4 RNASEH2A-201ENST00000221486 1165 ntAPPRIS P1 TSL 1 (best) BASIC26.5■■□□□ 1.83
HFM1A2PYH4 MAL-203ENST00000353004 873 ntTSL 1 (best) BASIC26.5■■□□□ 1.83
HFM1A2PYH4 CD9-202ENST00000382515 1229 ntTSL 5 BASIC26.5■■□□□ 1.83
HFM1A2PYH4 RAD52-211ENST00000536177 1139 ntAPPRIS ALT2 TSL 2 BASIC26.5■■□□□ 1.83
HFM1A2PYH4 SPINT1-AS1-202ENST00000564302 643 ntTSL 2 BASIC26.5■■□□□ 1.83
HFM1A2PYH4 RPS15A-205ENST00000565420 802 ntAPPRIS P1 TSL 2 BASIC26.5■■□□□ 1.83
HFM1A2PYH4 CHST13-202ENST00000615522 1146 ntTSL 5 BASIC26.5■■□□□ 1.83
HFM1A2PYH4 HSPA1A-202ENST00000608703 1909 ntTSL 2 BASIC26.5■■□□□ 1.83
HFM1A2PYH4 MARK2-211ENST00000513765 2671 ntAPPRIS ALT2 TSL 1 (best) BASIC26.5■■□□□ 1.83
HFM1A2PYH4 IMP3-201ENST00000314852 2028 ntAPPRIS P1 TSL 2 BASIC26.5■■□□□ 1.83
HFM1A2PYH4 GOLPH3-201ENST00000265070 2721 ntAPPRIS P1 TSL 1 (best) BASIC26.5■■□□□ 1.83
HFM1A2PYH4 TRPC1-203ENST00000476941 3061 ntAPPRIS ALT2 TSL 1 (best) BASIC26.5■■□□□ 1.83
HFM1A2PYH4 NFATC1-206ENST00000542384 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC26.5■■□□□ 1.83
HFM1A2PYH4 FCGRT-201ENST00000221466 1798 ntAPPRIS P1 TSL 1 (best) BASIC26.5■■□□□ 1.83
HFM1A2PYH4 HS3ST3A1-201ENST00000284110 2527 ntAPPRIS P1 TSL 1 (best) BASIC26.5■■□□□ 1.83
HFM1A2PYH4 GPS1-201ENST00000306823 1842 ntAPPRIS P3 TSL 1 (best) BASIC26.5■■□□□ 1.83
HFM1A2PYH4 FCER2-202ENST00000360067 1482 ntAPPRIS ALT2 TSL 5 BASIC26.5■■□□□ 1.83
HFM1A2PYH4 CCZ1-207ENST00000628813 2218 ntTSL 2 BASIC26.5■■□□□ 1.83
HFM1A2PYH4 TXNRD2-203ENST00000400519 3155 ntAPPRIS ALT2 TSL 1 (best) BASIC26.5■■□□□ 1.83
HFM1A2PYH4 RCHY1-208ENST00000512706 1011 ntTSL 3 BASIC26.49■■□□□ 1.83
HFM1A2PYH4 IDUA-210ENST00000514224 2130 ntTSL 2 BASIC26.49■■□□□ 1.83
HFM1A2PYH4 AC004801.5-202ENST00000546804 530 ntTSL 4 BASIC26.49■■□□□ 1.83
HFM1A2PYH4 MIR7706-201ENST00000613747 67 ntBASIC26.49■■□□□ 1.83
HFM1A2PYH4 SCHIP1-205ENST00000482804 1799 ntTSL 5 BASIC26.49■■□□□ 1.83
HFM1A2PYH4 NPTX2-201ENST00000265634 2700 ntAPPRIS P1 TSL 1 (best) BASIC26.49■■□□□ 1.83
HFM1A2PYH4 STMN4-202ENST00000350889 2288 ntTSL 1 (best) BASIC26.49■■□□□ 1.83
HFM1A2PYH4 FKRP-202ENST00000391909 2801 ntAPPRIS P1 TSL 2 BASIC26.49■■□□□ 1.83
HFM1A2PYH4 C11orf68-203ENST00000530188 1528 ntAPPRIS ALT2 BASIC26.49■■□□□ 1.83
HFM1A2PYH4 P2RY6-209ENST00000540342 1611 ntAPPRIS P1 TSL 2 BASIC26.49■■□□□ 1.83
HFM1A2PYH4 SKOR2-202ENST00000425639 3899 ntAPPRIS ALT2 TSL 5 BASIC26.49■■□□□ 1.83
HFM1A2PYH4 CDH24-205ENST00000554034 2759 ntAPPRIS P1 TSL 1 (best) BASIC26.49■■□□□ 1.83
HFM1A2PYH4 DNLZ-202ENST00000371739 2934 ntTSL 5 BASIC26.49■■□□□ 1.83
HFM1A2PYH4 CARHSP1-219ENST00000618335 2972 ntAPPRIS P1 TSL 4 BASIC26.49■■□□□ 1.83
HFM1A2PYH4 COPS7A-210ENST00000539735 1832 ntAPPRIS P1 TSL 5 BASIC26.49■■□□□ 1.83
HFM1A2PYH4 KLHL2-201ENST00000226725 3134 ntAPPRIS P3 TSL 1 (best) BASIC26.48■■□□□ 1.83
HFM1A2PYH4 NOTCH2NL-201ENST00000362074 1874 ntAPPRIS P2 TSL 1 (best) BASIC26.48■■□□□ 1.83
HFM1A2PYH4 ZNF419-207ENST00000442920 1857 ntAPPRIS ALT2 TSL 2 BASIC26.48■■□□□ 1.83
HFM1A2PYH4 HBA2-201ENST00000251595 605 ntAPPRIS P1 TSL 1 (best) BASIC26.48■■□□□ 1.83
HFM1A2PYH4 Metazoa_SRP.28-201ENST00000366402 260 ntBASIC26.48■■□□□ 1.83
HFM1A2PYH4 SZT2-202ENST00000372450 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC26.48■■□□□ 1.83
HFM1A2PYH4 HCCS-202ENST00000380762 1072 ntAPPRIS P1 TSL 1 (best) BASIC26.48■■□□□ 1.83
HFM1A2PYH4 MYCNOS-201ENST00000419083 770 ntTSL 1 (best) BASIC26.48■■□□□ 1.83
HFM1A2PYH4 TSTD3-201ENST00000452647 962 ntAPPRIS P2 TSL 2 BASIC26.48■■□□□ 1.83
HFM1A2PYH4 AL133343.2-201ENST00000457213 370 ntTSL 3 BASIC26.48■■□□□ 1.83
HFM1A2PYH4 AL356056.2-201ENST00000506914 669 ntTSL 4 BASIC26.48■■□□□ 1.83
HFM1A2PYH4 TRMT112-203ENST00000535750 823 ntTSL 2 BASIC26.48■■□□□ 1.83
HFM1A2PYH4 AL139288.1-201ENST00000623748 933 ntBASIC26.48■■□□□ 1.83
HFM1A2PYH4 GRB10-205ENST00000401949 2627 ntAPPRIS P1 TSL 1 (best) BASIC26.48■■□□□ 1.83
HFM1A2PYH4 RAVER1-207ENST00000615032 1952 ntAPPRIS ALT2 TSL 5 BASIC26.48■■□□□ 1.83
HFM1A2PYH4 PTPRM-201ENST00000332175 6095 ntAPPRIS P3 TSL 1 (best) BASIC26.48■■□□□ 1.83
HFM1A2PYH4 SERPINB6-208ENST00000616722 2047 ntTSL 2 BASIC26.48■■□□□ 1.83
HFM1A2PYH4 BAIAP2L2-202ENST00000381669 2146 ntAPPRIS P2 TSL 1 (best) BASIC26.48■■□□□ 1.83
HFM1A2PYH4 PEX5L-206ENST00000465751 2147 ntAPPRIS ALT2 TSL 2 BASIC26.48■■□□□ 1.83
HFM1A2PYH4 UNC5D-204ENST00000420357 2966 ntTSL 5 BASIC26.48■■□□□ 1.83
HFM1A2PYH4 TEAD4-201ENST00000358409 1637 ntTSL 1 (best) BASIC26.48■■□□□ 1.83
HFM1A2PYH4 SLC16A5-203ENST00000538213 1842 ntAPPRIS ALT2 TSL 2 BASIC26.48■■□□□ 1.83
HFM1A2PYH4 NKIRAS1-207ENST00000437230 1898 ntAPPRIS ALT1 TSL 5 BASIC26.48■■□□□ 1.83
Retrieved 100 of 98,524 protein–RNA pairs in 33.7 ms